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Description

serrate RNA effector molecule homolog (Arabidopsis) [Source:MGI Symbol;Acc:MGI:1933527]

Gene Synonyms

2810019G02Rik, Ars2, Asr2

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Srrt-201ENSMUST00000040873.123024875aaENSMUSP00000043123.8
 
Protein coding
CCDS39331Q99MR6-1 GENCODE basicAPPRIS P3TSL:5
Srrt-212ENSMUST00000199243.52988868aaENSMUSP00000143232.2
 
Protein coding
CCDS80440Q99MR6-4 GENCODE basicAPPRIS ALT2TSL:1
Srrt-209ENSMUST00000197466.52972864aaENSMUSP00000142564.2
 
Protein coding
CCDS80439Q99MR6-3 GENCODE basicAPPRIS ALT2TSL:5
Srrt-202ENSMUST00000196109.51660517aaENSMUSP00000142351.2
 
Protein coding
-A0A0G2JDF8 TSL:5CDS 5' incomplete
Srrt-216ENSMUST00000199756.3808269aaENSMUSP00000143442.2
 
Protein coding
-A0A0G2JG65 TSL:5CDS 5' and 3' incomplete
Srrt-211ENSMUST00000198526.53001467aaENSMUSP00000142435.2
 
Nonsense mediated decay
-A0A0G2JDN3 TSL:5
Srrt-215ENSMUST00000199605.2931239aaENSMUSP00000142344.2
 
Nonsense mediated decay
-A0A0G2JDF1 TSL:5CDS 5' incomplete
Srrt-218ENSMUST00000223263.268963aaENSMUSP00000152514.2
 
Nonsense mediated decay
-A0A1Y7VNN4 TSL:5CDS 5' incomplete
Srrt-213ENSMUST00000199365.559952aaENSMUSP00000143454.2
 
Nonsense mediated decay
-A0A0G2JG75 TSL:5CDS 5' incomplete
Srrt-210ENSMUST00000197484.247650aaENSMUSP00000142660.2
 
Nonsense mediated decay
-A0A0G2JE73 TSL:3
Srrt-214ENSMUST00000199473.22004No protein-
 
Retained intron
--TSL:5
Srrt-217ENSMUST00000200643.2884No protein-
 
Retained intron
--TSL:2
Srrt-206ENSMUST00000197144.2835No protein-
 
Retained intron
--TSL:2
Srrt-203ENSMUST00000196394.2767No protein-
 
Retained intron
--TSL:2
Srrt-205ENSMUST00000196960.2666No protein-
 
Retained intron
--TSL:2
Srrt-207ENSMUST00000197376.5600No protein-
 
Retained intron
--TSL:3
Srrt-204ENSMUST00000196576.2516No protein-
 
Retained intron
--TSL:2
Srrt-208ENSMUST00000197409.2416No protein-
 
Retained intron
--TSL:2
Description

Spi-1 proto-oncogene [Source:HGNC Symbol;Acc:HGNC:11241]

Gene Synonyms

OF, PU.1, SFPI1, SPI-1, SPI-A

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SPI1-202ENST00000378538.81374270aaENSP00000367799.4
 
Protein coding
CCDS7933P17947-1 NM_003120.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
SPI1-201ENST00000227163.81168271aaENSP00000227163.4
 
Protein coding
CCDS44591P17947-2 -GENCODE basicAPPRIS ALT1TSL:2
SPI1-204ENST00000533968.11290245aaENSP00000438846.1
 
Protein coding
-F5H3K6 -GENCODE basicTSL:1
SPI1-203ENST00000533030.166135aaENSP00000443865.1
 
Protein coding
-F5GZ94 -GENCODE basicTSL:2
Description

sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]

Gene Synonyms

FEB3, GEFSP2, HBSCI, NAC1, Nav1.1, SCN1, SMEI

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
SCN1A-224ENST00000674923.1119402009aaENSP00000501589.1
 
Protein coding
CCDS54413-NM_001165963.4MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT1
SCN1A-218ENST00000641575.1128741997aaENSP00000492917.1
 
Protein coding
CCDS86891A0A286YF26 -GENCODE basic
SCN1A-201ENST00000303395.9118532009aaENSP00000303540.4
 
Protein coding
CCDS54413P35498-1 -GENCODE basicAPPRIS P4TSL:5
SCN1A-216ENST00000637988.185621998aaENSP00000490780.1
 
Protein coding
CCDS33316P35498-2 -GENCODE basicAPPRIS ALT1TSL:5
SCN1A-208ENST00000635750.182991998aaENSP00000490799.1
 
Protein coding
CCDS33316P35498-2 -GENCODE basicAPPRIS ALT1TSL:5
SCN1A-202ENST00000375405.780971998aaENSP00000364554.3
 
Protein coding
CCDS33316P35498-2 -GENCODE basicAPPRIS ALT1TSL:5
SCN1A-203ENST00000409050.159461981aaENSP00000386312.1
 
Protein coding
CCDS54414P35498-3 -GENCODE basicTSL:5
SCN1A-219ENST00000641603.1125061915aaENSP00000492945.1
 
Protein coding
-A0A286YEQ8 -GENCODE basic
SCN1A-209ENST00000635776.1101071618aaENSP00000490692.1
 
Protein coding
-A0A1B0GVX7 -GENCODE basicTSL:5
SCN1A-217ENST00000640036.181311998aaENSP00000491573.1
 
Protein coding
-A0A1W2PPJ3 -GENCODE basicTSL:5
SCN1A-214ENST00000637285.21333aaENSP00000490612.1
 
Protein coding
---TSL:5CDS 3' incomplete
SCN1A-220ENST00000641996.112903149aaENSP00000493054.1
 
Nonsense mediated decay
-A0A286YFA8 --
SCN1A-211ENST00000636194.18508829aaENSP00000490288.1
 
Nonsense mediated decay
-A0A1B0GUX7 -TSL:5
SCN1A-222ENST00000671940.18315629aaENSP00000500336.1
 
Nonsense mediated decay
-A0A5F9ZHI6 --
SCN1A-213ENST00000637038.14268331aaENSP00000490184.1
 
Nonsense mediated decay
-A0A1B0GUN7 -TSL:5CDS 5' incomplete
SCN1A-212ENST00000636759.13606145aaENSP00000490895.1
 
Nonsense mediated decay
-A0A1B0GWE6 -TSL:5
SCN1A-210ENST00000635893.116830aaENSP00000489986.1
 
Nonsense mediated decay
-A0A1B0GU68 -TSL:5CDS 5' incomplete
SCN1A-221ENST00000642141.1921No protein-
 
Processed transcript
----
SCN1A-223ENST00000673490.110569No protein-
 
Retained intron
----
SCN1A-215ENST00000637968.14614No protein-
 
Retained intron
---TSL:5
SCN1A-206ENST00000507401.2711No protein-
 
Retained intron
---TSL:3
SCN1A-207ENST00000625916.1560No protein-
 
Retained intron
---TSL:4
SCN1A-204ENST00000473295.2544No protein-
 
Retained intron
---TSL:4
SCN1A-205ENST00000491429.1542No protein-
 
Retained intron
---TSL:4
Statistics

Exons: 4, Coding exons: 3, Transcript length: 168 bps, Translation length: 30 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENST00000635893.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript-based displays

    HASH(0x24fa47a0)