Human (GRCh38.p14)
Description

lysosomal trafficking regulator [Source:HGNC Symbol;Acc:HGNC:1968]

Gene Synonyms

CHS, CHS1, MAUVE

About this transcript

This transcript has 3 exons, is annotated with 1 domain and feature, is associated with 14956 variant alleles and maps to 96 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000389793.7LYST-201134663801aaENSP00000374443.2
 
Protein coding
CCDS31062Q99698-1 NM_000081.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENST00000697182.1LYST-216471377aaENSP00000513169.1
 
Protein coding
A0A8V8TKS8 -GENCODE basic
ENST00000697241.1LYST-22742241408aaENSP00000513206.1
 
Protein coding
A0A8V8TM69 -CDS 5' and 3' incomplete
ENST00000697242.1LYST-22839381266aaENSP00000513207.1
 
Protein coding
A0A8V8TL83 -CDS 3' incomplete
ENST00000697235.1LYST-2213809651aaENSP00000513202.1
 
Protein coding
A0A8V8TL78 -CDS 5' incomplete
ENST00000697181.1LYST-215351664aaENSP00000513168.1
 
Protein coding
A0A8V8TL58 -GENCODE basic
ENST00000697183.1LYST-217304573aaENSP00000513170.1
 
Protein coding
A0A8V8TMC0 -GENCODE basic
ENST00000475277.2LYST-2082525629aaENSP00000513164.1
 
Protein coding
A0A8V8TM32 -TSL:5CDS 5' incomplete
ENST00000697184.1LYST-218216064aaENSP00000513171.1
 
Protein coding
A0A8V8TL58 -GENCODE basic
ENST00000468626.2LYST-206114077aaENSP00000513173.1
 
Protein coding
A0A8V8TKS8 -GENCODE basicTSL:1
ENST00000468107.5LYST-20595173aaENSP00000513172.1
 
Protein coding
A0A8V8TMC0 -GENCODE basicTSL:1
ENST00000487530.2LYST-209542181aaENSP00000417168.1
 
Protein coding
H7C4F5 -TSL:4CDS 5' and 3' incomplete
ENST00000697178.1LYST-212139201382aaENSP00000513163.1
 
Nonsense mediated decay
A0A8V8TKT6 --
ENST00000489585.5LYST-21070692001aaENSP00000513166.1
 
Nonsense mediated decay
Q99698-2 -TSL:1
ENST00000697236.1LYST-22267231011aaENSP00000513203.1
 
Nonsense mediated decay
A0A8V8TME5 -CDS 5' incomplete
ENST00000461526.2LYST-20257711013aaENSP00000513165.1
 
Nonsense mediated decay
A0A8V8TL52 -TSL:3CDS 5' incomplete
ENST00000697237.1LYST-2233918251aaENSP00000513204.1
 
Nonsense mediated decay
A0A8V8TKU7 -CDS 5' incomplete
ENST00000697240.1LYST-22637841076aaENSP00000513205.1
 
Nonsense mediated decay
A0A8V8TKW4 -CDS 5' incomplete
ENST00000697180.1LYST-214934208aaENSP00000513167.1
 
Nonsense mediated decay
A0A8V8TMB4 -CDS 5' incomplete
ENST00000697239.1LYST-2251275No protein-
 
Protein coding CDS not defined
---
ENST00000697186.1LYST-2201210No protein-
 
Protein coding CDS not defined
---
ENST00000697185.1LYST-2191169No protein-
 
Protein coding CDS not defined
---
ENST00000697248.1LYST-2291131No protein-
 
Protein coding CDS not defined
---
ENST00000697238.1LYST-2241035No protein-
 
Protein coding CDS not defined
---
ENST00000697249.1LYST-230668No protein-
 
Protein coding CDS not defined
---
ENST00000473037.5LYST-2078293No protein-
 
Retained intron
--TSL:2
ENST00000465349.5LYST-2045220No protein-
 
Retained intron
--TSL:1
ENST00000462376.2LYST-2035087No protein-
 
Retained intron
--TSL:4
ENST00000697179.1LYST-2134519No protein-
 
Retained intron
---
ENST00000492844.1LYST-211452No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 3, Coding exons: 1, Transcript length: 1,140 bps, Translation length: 77 residues

Transcript Support Level (TSL)

TSL:1

Version

ENST00000468626.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.