Human (GRCh38.p14)
Description

nuclear prelamin A recognition factor [Source:HGNC Symbol;Acc:HGNC:29916]

Gene Synonyms

DKFZP434G0420, FLJ10067, IOP2

Location
About this transcript

This transcript has 11 exons, is annotated with 10 domains and features, is associated with 15844 variant alleles and maps to 496 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000309794.16NARF-2013814456aaENSP00000309899.10
 
Protein coding
CCDS32777Q9UHQ1-1 NM_012336.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000390006.8NARF-2041766397aaENSP00000374656.4
 
Protein coding
CCDS42404Q9UHQ1-4 -GENCODE basicTSL:2
ENST00000457415.7NARF-2051668502aaENSP00000414678.3
 
Protein coding
E7EP87 -GENCODE basicTSL:5
ENST00000345415.11NARF-2021487408aaENSP00000283996.9
 
Protein coding
CCDS42403Q9UHQ1-3 -GENCODE basicTSL:1
ENST00000577410.2NARF-206873158aaENSP00000464124.1
 
Protein coding
J3QRB0 -TSL:5CDS 3' incomplete
ENST00000577432.5NARF-207866262aaENSP00000462792.1
 
Protein coding
J3KT43 -TSL:5CDS 3' incomplete
ENST00000580296.5NARF-21373386aaENSP00000463347.1
 
Protein coding
J3QL28 -TSL:3CDS 3' incomplete
ENST00000579198.5NARF-21259937aaENSP00000462240.1
 
Protein coding
J3KS03 -TSL:5CDS 3' incomplete
ENST00000584411.5NARF-22352587aaENSP00000464644.1
 
Protein coding
J3QSD9 -TSL:4CDS 3' incomplete
ENST00000584513.1NARF-225500167aaENSP00000462970.1
 
Protein coding
J3KTG5 -TSL:3CDS 5' and 3' incomplete
ENST00000374611.9NARF-2031722262aaENSP00000363739.5
 
Nonsense mediated decay
E9PH27 -TSL:5
ENST00000582907.5NARF-2191454188aaENSP00000462006.1
 
Nonsense mediated decay
J3KRH7 -TSL:5
ENST00000581795.5NARF-2171430143aaENSP00000463087.1
 
Nonsense mediated decay
J3KTP5 -TSL:2
ENST00000581202.5NARF-2151013217aaENSP00000462305.1
 
Nonsense mediated decay
J3KS48 -TSL:5
ENST00000582585.1NARF-21889199aaENSP00000467119.1
 
Nonsense mediated decay
J3QLT6 -TSL:5
ENST00000580748.1NARF-21457799aaENSP00000463697.1
 
Nonsense mediated decay
J3QLT6 -TSL:5
ENST00000581743.5NARF-216785No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000583181.5NARF-220505No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000584192.5NARF-222495No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000577812.5NARF-2082598No protein-
 
Retained intron
--TSL:5
ENST00000584445.5NARF-2242484No protein-
 
Retained intron
--TSL:2
ENST00000578082.5NARF-209841No protein-
 
Retained intron
--TSL:4
ENST00000578820.1NARF-210625No protein-
 
Retained intron
--TSL:3
ENST00000579083.1NARF-211561No protein-
 
Retained intron
--TSL:4
ENST00000583908.1NARF-221430No protein-
 
Retained intron
--TSL:3
ENST00000584965.1NARF-226300No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 11, Coding exons: 11, Transcript length: 3,814 bps, Translation length: 456 residues

MANE

This MANE Select transcript contains ENSP00000309899 and matches to NM_012336.4 and NP_036468.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UHQ1

CCDS

This transcript is a member of the Human CCDS set: CCDS32777

Transcript Support Level (TSL)

TSL:1

Version

ENST00000309794.16

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.