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Description

SS18 subunit of BAF chromatin remodeling complex [Source:HGNC Symbol;Acc:HGNC:11340]

Gene Synonyms

SSXT, SYT

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000415083.7SS18-2033402418aaENSP00000414516.2
 
Protein coding
CCDS32807Q15532-1 NM_001007559.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000542420.6SS18-2052321395aaENSP00000438066.2
 
Protein coding
CCDS77168B4DLD3 -GENCODE basicTSL:2
ENST00000269137.11SS18-2011836387aaENSP00000269137.7
 
Protein coding
CCDS54183Q15532-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000584083.5SS18-224663130aaENSP00000463943.1
 
Protein coding
-J3QQX5 -TSL:4CDS 3' incomplete
ENST00000579061.5SS18-212646152aaENSP00000462766.1
 
Protein coding
-J3KT22 -TSL:3CDS 3' incomplete
ENST00000581021.5SS18-21858870aaENSP00000463586.1
 
Protein coding
-J3QLJ7 -TSL:4CDS 3' incomplete
ENST00000579640.5SS18-213184058aaENSP00000462363.1
 
Nonsense mediated decay
-J3KRP6 -TSL:2
ENST00000269138.9SS18-202154861aaENSP00000269138.5
 
Nonsense mediated decay
-X6R3J2 -TSL:2
ENST00000585121.5SS18-225154584aaENSP00000462838.1
 
Nonsense mediated decay
-J3KT74 -TSL:2
ENST00000539244.6SS18-20497741aaENSP00000441760.2
 
Nonsense mediated decay
-F5GWN1 -TSL:1
ENST00000578954.5SS18-21175660aaENSP00000464664.1
 
Nonsense mediated decay
-J3QS72 -TSL:3
ENST00000582448.5SS18-22158535aaENSP00000464609.1
 
Nonsense mediated decay
-J3QSB3 -TSL:5
ENST00000577636.5SS18-20758055aaENSP00000463933.1
 
Nonsense mediated decay
-J3QQW6 -TSL:3
ENST00000578700.5SS18-21057545aaENSP00000464673.1
 
Nonsense mediated decay
-J3QSG1 -TSL:5
ENST00000581570.5SS18-21957160aaENSP00000464556.1
 
Nonsense mediated decay
-J3QS72 -TSL:5
ENST00000580751.5SS18-21654760aaENSP00000464049.1
 
Nonsense mediated decay
-J3QS72 -TSL:4
ENST00000580642.2SS18-21554558aaENSP00000462104.1
 
Nonsense mediated decay
-J3KRP6 -TSL:4
ENST00000582792.5SS18-22253194aaENSP00000463928.1
 
Nonsense mediated decay
-J3QQW2 -TSL:5
ENST00000577572.5SS18-20651068aaENSP00000463802.1
 
Nonsense mediated decay
-J3QQM2 -TSL:4
ENST00000585241.5SS18-226774No protein-
 
Processed transcript
---TSL:5
ENST00000577751.5SS18-208580No protein-
 
Processed transcript
---TSL:4
ENST00000578595.1SS18-209406No protein-
 
Processed transcript
---TSL:3
ENST00000583595.1SS18-223375No protein-
 
Processed transcript
---TSL:3
ENST00000582092.1SS18-220215No protein-
 
Processed transcript
---TSL:1
ENST00000580958.5SS18-217775No protein-
 
Retained intron
---TSL:2
ENST00000580003.1SS18-214609No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 6, Coding exons: 3, Transcript length: 571 bps, Translation length: 60 residues

Transcript Support Level (TSL)

TSL:5

Version

ENST00000581570.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x28b8c5a0)