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Description

methylcrotonyl-CoA carboxylase subunit 2 [Source:HGNC Symbol;Acc:HGNC:6937]

Gene Synonyms

MCCB, MCCCβ

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000340941.11MCCC2-2013624563aaENSP00000343657.6
 
Protein coding
CCDS34184Q9HCC0-1 NM_022132.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000682876.1MCCC2-2233763606aaENSP00000508389.1
 
Protein coding
---GENCODE basic
ENST00000682727.1MCCC2-2223621560aaENSP00000507393.1
 
Protein coding
---GENCODE basic
ENST00000683789.1MCCC2-2313574525aaENSP00000507012.1
 
Protein coding
---GENCODE basic
ENST00000683403.1MCCC2-2283528533aaENSP00000507896.1
 
Protein coding
---GENCODE basic
ENST00000683429.1MCCC2-2293486432aaENSP00000507697.1
 
Protein coding
---GENCODE basic
ENST00000682045.1MCCC2-2123473515aaENSP00000507329.1
 
Protein coding
---GENCODE basic
ENST00000682214.1MCCC2-2143433432aaENSP00000507336.1
 
Protein coding
---GENCODE basic
ENST00000681968.1MCCC2-2103422394aaENSP00000508143.1
 
Protein coding
---GENCODE basic
ENST00000683339.1MCCC2-2273378491aaENSP00000507758.1
 
Protein coding
---GENCODE basic
ENST00000684530.1MCCC2-2412656269aaENSP00000507439.1
 
Protein coding
---CDS 5' incomplete
ENST00000683665.1MCCC2-2302110363aaENSP00000507068.1
 
Protein coding
---GENCODE basic
ENST00000509358.7MCCC2-2051508357aaENSP00000420994.3
 
Protein coding
-D6RDF7 -GENCODE basicTSL:1
ENST00000629193.3MCCC2-2091360325aaENSP00000486535.2
 
Protein coding
-D6R9R1 -GENCODE basicTSL:1
ENST00000684310.1MCCC2-2371154285aaENSP00000507550.1
 
Protein coding
---CDS 5' incomplete
ENST00000683882.1MCCC2-2333685368aaENSP00000506735.1
 
Nonsense mediated decay
----
ENST00000682687.1MCCC2-2213678367aaENSP00000507945.1
 
Nonsense mediated decay
-A0A0S2Z5R4 --
ENST00000682541.1MCCC2-2183577342aaENSP00000507673.1
 
Nonsense mediated decay
----
ENST00000683258.1MCCC2-226357468aaENSP00000507448.1
 
Nonsense mediated decay
----
ENST00000684254.1MCCC2-236355668aaENSP00000508001.1
 
Nonsense mediated decay
----
ENST00000684024.1MCCC2-234346858aaENSP00000507175.1
 
Nonsense mediated decay
----
ENST00000683098.1MCCC2-2243126321aaENSP00000507670.1
 
Nonsense mediated decay
----
ENST00000684132.1MCCC2-2352703156aaENSP00000507929.1
 
Nonsense mediated decay
---CDS 5' incomplete
ENST00000512218.6MCCC2-2082127329aaENSP00000423202.2
 
Nonsense mediated decay
-D6R9R1 -TSL:2
ENST00000509539.3MCCC2-206814115aaENSP00000425474.3
 
Nonsense mediated decay
-D6RD67 -TSL:3CDS 5' incomplete
ENST00000682499.1MCCC2-2174344No protein-
 
Processed transcript
----
ENST00000505787.8MCCC2-2033874No protein-
 
Processed transcript
---TSL:5
ENST00000681991.1MCCC2-2113529No protein-
 
Processed transcript
----
ENST00000682231.1MCCC2-2152418No protein-
 
Processed transcript
----
ENST00000682438.1MCCC2-2165535No protein-
 
Retained intron
----
ENST00000682175.1MCCC2-2135332No protein-
 
Retained intron
----
ENST00000682667.1MCCC2-2203673No protein-
 
Retained intron
----
ENST00000505435.4MCCC2-2023624No protein-
 
Retained intron
---TSL:3
ENST00000683163.1MCCC2-2253498No protein-
 
Retained intron
----
ENST00000683847.1MCCC2-2323453No protein-
 
Retained intron
----
ENST00000682640.1MCCC2-2193239No protein-
 
Retained intron
----
ENST00000684474.1MCCC2-2403158No protein-
 
Retained intron
----
ENST00000684686.1MCCC2-2433125No protein-
 
Retained intron
----
ENST00000684473.1MCCC2-2392889No protein-
 
Retained intron
----
ENST00000510895.7MCCC2-2072587No protein-
 
Retained intron
---TSL:2
ENST00000684652.1MCCC2-2422352No protein-
 
Retained intron
----
ENST00000507169.5MCCC2-204869No protein-
 
Retained intron
---TSL:3
ENST00000684316.1MCCC2-238286No protein-
 
Retained intron
----
Description

rhabdomyosarcoma 2 associated transcript [Source:HGNC Symbol;Acc:HGNC:29893]

Gene Synonyms

LINC00054, NCRMS, NCRNA00054

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000663411.1RMST-2222264No protein-
 
Retained intron
---
ENST00000547996.2RMST-2041621No protein-
 
Retained intron
--TSL:3
ENST00000547946.1RMST-203687No protein-
 
Retained intron
--TSL:NA
ENST00000640149.1RMST-2092844No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basicTSL:5
ENST00000658877.1RMST-2163444No protein-
 
lncRNA
--GENCODE basic
ENST00000639542.1RMST-2083269No protein-
 
lncRNA
--TSL:5
ENST00000690227.1RMST-2372945No protein-
 
lncRNA
--GENCODE basic
ENST00000687565.1RMST-2342690No protein-
 
lncRNA
---
ENST00000660138.1RMST-2172632No protein-
 
lncRNA
---
ENST00000538559.6RMST-2012598No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000687746.1RMST-2352480No protein-
 
lncRNA
---
ENST00000665975.1RMST-2272299No protein-
 
lncRNA
--GENCODE basic
ENST00000670745.1RMST-2332278No protein-
 
lncRNA
---
ENST00000693044.1RMST-2392231No protein-
 
lncRNA
---
ENST00000689144.1RMST-2362218No protein-
 
lncRNA
---
ENST00000657936.1RMST-2152210No protein-
 
lncRNA
---
ENST00000662772.1RMST-2212122No protein-
 
lncRNA
---
ENST00000639121.1RMST-2072099No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000541282.5RMST-2022099No protein-
 
lncRNA
--TSL:2
ENST00000662330.1RMST-2192069No protein-
 
lncRNA
---
ENST00000656448.1RMST-2132061No protein-
 
lncRNA
---
ENST00000666664.1RMST-2282049No protein-
 
lncRNA
---
ENST00000666798.1RMST-2291980No protein-
 
lncRNA
--GENCODE basic
ENST00000664685.1RMST-2261902No protein-
 
lncRNA
--GENCODE basic
ENST00000667306.1RMST-2301902No protein-
 
lncRNA
--GENCODE basic
ENST00000654331.1RMST-2111794No protein-
 
lncRNA
---
ENST00000663509.1RMST-2231736No protein-
 
lncRNA
---
ENST00000664656.1RMST-2251730No protein-
 
lncRNA
---
ENST00000661686.1RMST-2181666No protein-
 
lncRNA
---
ENST00000662502.1RMST-2201587No protein-
 
lncRNA
---
ENST00000690936.1RMST-2381548No protein-
 
lncRNA
---
ENST00000670160.1RMST-2321474No protein-
 
lncRNA
---
ENST00000552411.2RMST-2061306No protein-
 
lncRNA
--TSL:3
ENST00000548886.2RMST-2051125No protein-
 
lncRNA
--TSL:1
ENST00000656458.1RMST-2141122No protein-
 
lncRNA
---
ENST00000652810.1RMST-2101064No protein-
 
lncRNA
---
ENST00000667445.1RMST-231971No protein-
 
lncRNA
---
ENST00000655366.1RMST-212859No protein-
 
lncRNA
---
ENST00000663659.1RMST-224793No protein-
 
lncRNA
---
Description

long intergenic non-protein coding RNA 847 [Source:HGNC Symbol;Acc:HGNC:45050]

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000651233.1LINC00847-2064044No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
ENST00000501855.6LINC00847-2011871No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000659553.1LINC00847-2151817No protein-
 
lncRNA
---
ENST00000502162.2LINC00847-2031809No protein-
 
lncRNA
--TSL:1
ENST00000501937.2LINC00847-2021809No protein-
 
lncRNA
--TSL:2
ENST00000658025.1LINC00847-2121779No protein-
 
lncRNA
---
ENST00000654313.1LINC00847-2101762No protein-
 
lncRNA
---
ENST00000661810.1LINC00847-2191738No protein-
 
lncRNA
---
ENST00000657229.1LINC00847-2111713No protein-
 
lncRNA
---
ENST00000653411.1LINC00847-2081708No protein-
 
lncRNA
---
ENST00000659497.1LINC00847-2141703No protein-
 
lncRNA
---
ENST00000661444.1LINC00847-2181683No protein-
 
lncRNA
---
ENST00000509921.2LINC00847-2051648No protein-
 
lncRNA
--TSL:3
ENST00000660674.1LINC00847-2161602No protein-
 
lncRNA
---
ENST00000658585.1LINC00847-2131594No protein-
 
lncRNA
---
ENST00000652659.1LINC00847-2071498No protein-
 
lncRNA
---
ENST00000665473.1LINC00847-2211445No protein-
 
lncRNA
---
ENST00000653584.1LINC00847-2091365No protein-
 
lncRNA
---
ENST00000667360.1LINC00847-2221321No protein-
 
lncRNA
--GENCODE basic
ENST00000661298.1LINC00847-2171267No protein-
 
lncRNA
---
ENST00000508309.2LINC00847-2041231No protein-
 
lncRNA
--TSL:2
ENST00000662722.1LINC00847-2201160No protein-
 
lncRNA
---
Description

dynein cytoplasmic 1 heavy chain 1 [Source:HGNC Symbol;Acc:HGNC:2961]

Gene Synonyms

CMT2O, DHC1, DNCH1, DNCL, DNECL, Dnchc1, HL-3, p22

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000360184.10DYNC1H1-201199404646aaENSP00000348965.4
 
Protein coding
CCDS9966Q14204 NM_001376.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000679720.1DYNC1H1-240199034637aaENSP00000505938.1
 
Protein coding
---GENCODE basic
ENST00000681574.1DYNC1H1-259145194672aaENSP00000505523.1
 
Protein coding
---GENCODE basic
ENST00000644881.2DYNC1H1-224142914604aaENSP00000495022.2
 
Protein coding
-A0A2R8Y5T0 -GENCODE basic
ENST00000645149.2DYNC1H1-229141344597aaENSP00000495944.2
 
Protein coding
-A0A2R8Y706 -GENCODE basic
ENST00000643508.2DYNC1H1-212118023641aaENSP00000495528.2
 
Protein coding
-A0A2R8YFZ7 -GENCODE basic
ENST00000680137.1DYNC1H1-244113283668aaENSP00000505294.1
 
Protein coding
---GENCODE basic
ENST00000645114.2DYNC1H1-22884002726aaENSP00000495884.2
 
Protein coding
-A0A2R8YGC7 -GENCODE basic
ENST00000680313.1DYNC1H1-247200664459aaENSP00000506208.1
 
Nonsense mediated decay
----
ENST00000684561.1DYNC1H1-264200452881aaENSP00000506816.1
 
Nonsense mediated decay
----
ENST00000681536.1DYNC1H1-258144882346aaENSP00000505821.1
 
Nonsense mediated decay
----
ENST00000681822.1DYNC1H1-262143154514aaENSP00000505744.1
 
Nonsense mediated decay
----
ENST00000680715.1DYNC1H1-249142894234aaENSP00000505332.1
 
Nonsense mediated decay
----
ENST00000681283.1DYNC1H1-255142783758aaENSP00000505667.1
 
Nonsense mediated decay
----
ENST00000679910.1DYNC1H1-241142772969aaENSP00000506521.1
 
Nonsense mediated decay
----
ENST00000680200.1DYNC1H1-246142663576aaENSP00000506166.1
 
Nonsense mediated decay
----
ENST00000680120.1DYNC1H1-243142614408aaENSP00000504863.1
 
Nonsense mediated decay
----
ENST00000680423.1DYNC1H1-248142012735aaENSP00000505483.1
 
Nonsense mediated decay
----
ENST00000681066.1DYNC1H1-253141943966aaENSP00000506344.1
 
Nonsense mediated decay
----
ENST00000645039.2DYNC1H1-226140313965aaENSP00000495220.2
 
Nonsense mediated decay
-A0A2R8Y6H2 --
ENST00000679486.1DYNC1H1-238135344174aaENSP00000506688.1
 
Nonsense mediated decay
----
ENST00000681010.1DYNC1H1-252132444179aaENSP00000505201.1
 
Nonsense mediated decay
----
ENST00000681123.1DYNC1H1-254123624001aaENSP00000506124.1
 
Nonsense mediated decay
----
ENST00000679629.1DYNC1H1-239121583933aaENSP00000505589.1
 
Nonsense mediated decay
----
ENST00000680874.1DYNC1H1-251111973547aaENSP00000504911.1
 
Nonsense mediated decay
----
ENST00000681311.1DYNC1H1-25697572898aaENSP00000505519.1
 
Nonsense mediated decay
----
ENST00000680808.1DYNC1H1-25094722941aaENSP00000506446.1
 
Nonsense mediated decay
----
ENST00000681859.1DYNC1H1-26377532341aaENSP00000505467.1
 
Nonsense mediated decay
----
ENST00000643958.2DYNC1H1-22060591372aaENSP00000505734.1
 
Nonsense mediated decay
----
ENST00000681668.1DYNC1H1-26052611189aaENSP00000506420.1
 
Nonsense mediated decay
----
ENST00000680001.1DYNC1H1-2425238186aaENSP00000506351.1
 
Nonsense mediated decay
----
ENST00000681751.1DYNC1H1-261505188aaENSP00000506637.1
 
Nonsense mediated decay
----
ENST00000681321.1DYNC1H1-2571890No protein-
 
Processed transcript
----
ENST00000643684.1DYNC1H1-2157596No protein-
 
Retained intron
----
ENST00000647366.1DYNC1H1-2377322No protein-
 
Retained intron
----
ENST00000644794.1DYNC1H1-2234842No protein-
 
Retained intron
----
ENST00000643437.1DYNC1H1-2114773No protein-
 
Retained intron
----
ENST00000647307.1DYNC1H1-2364416No protein-
 
Retained intron
----
ENST00000647204.2DYNC1H1-2354235No protein-
 
Retained intron
----
ENST00000643722.1DYNC1H1-2164102No protein-
 
Retained intron
----
ENST00000643829.1DYNC1H1-2194050No protein-
 
Retained intron
----
ENST00000645697.1DYNC1H1-2303547No protein-
 
Retained intron
----
ENST00000643764.1DYNC1H1-2183314No protein-
 
Retained intron
----
ENST00000643565.1DYNC1H1-2133159No protein-
 
Retained intron
----
ENST00000643591.1DYNC1H1-2142950No protein-
 
Retained intron
----
ENST00000643729.1DYNC1H1-2172863No protein-
 
Retained intron
----
ENST00000680178.1DYNC1H1-2452854No protein-
 
Retained intron
----
ENST00000643279.1DYNC1H1-2102845No protein-
 
Retained intron
----
ENST00000647143.1DYNC1H1-2342554No protein-
 
Retained intron
----
ENST00000645085.1DYNC1H1-2272397No protein-
 
Retained intron
----
ENST00000644239.2DYNC1H1-2222298No protein-
 
Retained intron
----
ENST00000556229.2DYNC1H1-2062292No protein-
 
Retained intron
---TSL:2
ENST00000646418.1DYNC1H1-2322170No protein-
 
Retained intron
----
ENST00000642882.1DYNC1H1-2092111No protein-
 
Retained intron
----
ENST00000644206.1DYNC1H1-2211919No protein-
 
Retained intron
----
ENST00000556499.3DYNC1H1-2071416No protein-
 
Retained intron
---TSL:3
ENST00000555062.2DYNC1H1-2031374No protein-
 
Retained intron
---TSL:2
ENST00000645978.2DYNC1H1-2311355No protein-
 
Retained intron
----
ENST00000642716.1DYNC1H1-2081315No protein-
 
Retained intron
----
ENST00000644888.1DYNC1H1-225968No protein-
 
Retained intron
----
ENST00000556139.2DYNC1H1-205818No protein-
 
Retained intron
---TSL:3
ENST00000554854.1DYNC1H1-202721No protein-
 
Retained intron
---TSL:3
ENST00000647119.1DYNC1H1-233513No protein-
 
Retained intron
----
ENST00000555800.2DYNC1H1-204476No protein-
 
Retained intron
---TSL:2
Description

JPX transcript, XIST activator [Source:HGNC Symbol;Acc:HGNC:37191]

Gene Synonyms

DCBALD06, ENOX, LINC00183, NCRNA00183

Location
Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000602772.5JPX-2071692No protein-
 
lncRNA
--Ensembl CanonicalTSL:1
ENST00000639185.1JPX-2129658No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000654005.1JPX-2195531No protein-
 
lncRNA
--GENCODE basic
ENST00000664637.1JPX-2565488No protein-
 
lncRNA
---
ENST00000657372.1JPX-2325467No protein-
 
lncRNA
---
ENST00000660856.1JPX-2465352No protein-
 
lncRNA
---
ENST00000667886.1JPX-2665350No protein-
 
lncRNA
---
ENST00000657179.1JPX-2315113No protein-
 
lncRNA
---
ENST00000670408.1JPX-2734686No protein-
 
lncRNA
---
ENST00000668590.1JPX-2694628No protein-
 
lncRNA
---
ENST00000655090.1JPX-2243950No protein-
 
lncRNA
---
ENST00000660836.1JPX-2443758No protein-
 
lncRNA
---
ENST00000660840.1JPX-2453571No protein-
 
lncRNA
---
ENST00000669149.1JPX-2703463No protein-
 
lncRNA
---
ENST00000653479.1JPX-2152753No protein-
 
lncRNA
---
ENST00000670506.1JPX-2762112No protein-
 
lncRNA
--GENCODE basic
ENST00000659254.1JPX-2372067No protein-
 
lncRNA
---
ENST00000668488.1JPX-2681947No protein-
 
lncRNA
---
ENST00000414209.6JPX-2011910No protein-
 
lncRNA
--TSL:2
ENST00000671207.1JPX-2811893No protein-
 
lncRNA
---
ENST00000670994.1JPX-2791852No protein-
 
lncRNA
---
ENST00000663027.1JPX-2521818No protein-
 
lncRNA
---
ENST00000655879.1JPX-2251817No protein-
 
lncRNA
---
ENST00000657910.1JPX-2341746No protein-
 
lncRNA
---
ENST00000671336.1JPX-2821746No protein-
 
lncRNA
---
ENST00000665032.1JPX-2571744No protein-
 
lncRNA
---
ENST00000667057.1JPX-2621726No protein-
 
lncRNA
---
ENST00000670685.1JPX-2771689No protein-
 
lncRNA
---
ENST00000661130.1JPX-2471675No protein-
 
lncRNA
---
ENST00000671476.1JPX-2831624No protein-
 
lncRNA
---
ENST00000640437.1JPX-2131620No protein-
 
lncRNA
--TSL:5
ENST00000658649.1JPX-2351561No protein-
 
lncRNA
---
ENST00000667937.1JPX-2671533No protein-
 
lncRNA
---
ENST00000659373.1JPX-2381525No protein-
 
lncRNA
---
ENST00000662120.1JPX-2491492No protein-
 
lncRNA
---
ENST00000659849.1JPX-2401492No protein-
 
lncRNA
---
ENST00000664295.1JPX-2541469No protein-
 
lncRNA
---
ENST00000670192.1JPX-2721452No protein-
 
lncRNA
---
ENST00000662239.1JPX-2501442No protein-
 
lncRNA
---
ENST00000653885.1JPX-2171422No protein-
 
lncRNA
---
ENST00000670464.1JPX-2741395No protein-
 
lncRNA
---
ENST00000670805.1JPX-2781395No protein-
 
lncRNA
---
ENST00000655994.1JPX-2261388No protein-
 
lncRNA
---
ENST00000654137.1JPX-2201377No protein-
 
lncRNA
---
ENST00000667645.1JPX-2651364No protein-
 
lncRNA
---
ENST00000659023.1JPX-2361316No protein-
 
lncRNA
---
ENST00000660546.1JPX-2431292No protein-
 
lncRNA
---
ENST00000669168.1JPX-2711292No protein-
 
lncRNA
---
ENST00000656263.1JPX-2271249No protein-
 
lncRNA
---
ENST00000665345.1JPX-2581244No protein-
 
lncRNA
---
ENST00000602938.6JPX-2101242No protein-
 
lncRNA
--TSL:2
ENST00000666059.1JPX-2591223No protein-
 
lncRNA
---
ENST00000661546.1JPX-2481217No protein-
 
lncRNA
---
ENST00000670503.1JPX-2751216No protein-
 
lncRNA
---
ENST00000653808.1JPX-2161213No protein-
 
lncRNA
---
ENST00000656624.1JPX-2291195No protein-
 
lncRNA
---
ENST00000602737.6JPX-2061166No protein-
 
lncRNA
--TSL:3
ENST00000654995.1JPX-2231162No protein-
 
lncRNA
---
ENST00000656509.1JPX-2281132No protein-
 
lncRNA
---
ENST00000671021.1JPX-2801109No protein-
 
lncRNA
---
ENST00000659622.1JPX-2391100No protein-
 
lncRNA
---
ENST00000659852.1JPX-2411096No protein-
 
lncRNA
---
ENST00000653069.1JPX-2141005No protein-
 
lncRNA
---
ENST00000654196.1JPX-221999No protein-
 
lncRNA
---
ENST00000664328.1JPX-255991No protein-
 
lncRNA
---
ENST00000667573.1JPX-264962No protein-
 
lncRNA
---
ENST00000662543.1JPX-251930No protein-
 
lncRNA
---
ENST00000666493.1JPX-261882No protein-
 
lncRNA
---
ENST00000667294.1JPX-263864No protein-
 
lncRNA
---
ENST00000660087.1JPX-242853No protein-
 
lncRNA
---
ENST00000671518.1JPX-284845No protein-
 
lncRNA
---
ENST00000602895.6JPX-208843No protein-
 
lncRNA
--TSL:3
ENST00000602294.6JPX-204782No protein-
 
lncRNA
--TSL:2
ENST00000602546.5JPX-205762No protein-
 
lncRNA
--TSL:3
ENST00000602920.6JPX-209753No protein-
 
lncRNA
--TSL:2
ENST00000653929.1JPX-218739No protein-
 
lncRNA
---
ENST00000666318.1JPX-260705No protein-
 
lncRNA
---
ENST00000602985.6JPX-211633No protein-
 
lncRNA
--TSL:3
ENST00000654374.1JPX-222606No protein-
 
lncRNA
---
ENST00000657638.1JPX-233561No protein-
 
lncRNA
---
ENST00000663470.1JPX-253554No protein-
 
lncRNA
---
ENST00000657096.1JPX-230488No protein-
 
lncRNA
---
ENST00000453317.1JPX-203483No protein-
 
lncRNA
--TSL:2
ENST00000415215.1JPX-202475No protein-
 
lncRNA
--TSL:5
Description

glucosidase II alpha subunit [Source:HGNC Symbol;Acc:HGNC:4138]

Gene Synonyms

G2AN, GIIA, GluII, KIAA0088

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000356638.8GANAB-2023835944aaENSP00000349053.3
 
Protein coding
CCDS8026Q14697-1 NM_198334.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000346178.8GANAB-2013906966aaENSP00000340466.4
 
Protein coding
CCDS41656Q14697-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000648273.1GANAB-2173846847aaENSP00000497655.1
 
Protein coding
CCDS60817F5H6X6 -GENCODE basic
ENST00000540933.5GANAB-2163836847aaENSP00000442962.1
 
Protein coding
CCDS60817F5H6X6 -GENCODE basicTSL:1
ENST00000534779.5GANAB-2152626852aaENSP00000435306.1
 
Protein coding
CCDS60818E9PKU7 -GENCODE basicTSL:2
ENST00000525994.1GANAB-204390119aaENSP00000434805.1
 
Protein coding
-E9PNH1 -TSL:4CDS 3' incomplete
ENST00000532402.5GANAB-211371852aaENSP00000432181.1
 
Nonsense mediated decay
-Q14697-3 -TSL:1
ENST00000534613.5GANAB-21473752aaENSP00000434921.1
 
Nonsense mediated decay
-Q14697-3 -TSL:5
ENST00000529737.5GANAB-20957776aaENSP00000432593.1
 
Nonsense mediated decay
-E9PQ69 -TSL:4
ENST00000526210.1GANAB-20553352aaENSP00000433799.1
 
Nonsense mediated decay
-Q14697-3 -TSL:4
ENST00000534422.5GANAB-213702No protein-
 
Processed transcript
---TSL:5
ENST00000534419.1GANAB-212640No protein-
 
Processed transcript
---TSL:4
ENST00000526732.5GANAB-207824No protein-
 
Retained intron
---TSL:2
ENST00000524437.5GANAB-203671No protein-
 
Retained intron
---TSL:2
ENST00000528503.1GANAB-208608No protein-
 
Retained intron
---TSL:2
ENST00000531563.1GANAB-210414No protein-
 
Retained intron
---TSL:2
ENST00000526392.1GANAB-206257No protein-
 
Retained intron
---TSL:3
Description

U2 small nuclear RNA auxiliary factor 1 like 4 [Source:HGNC Symbol;Acc:HGNC:23020]

Gene Synonyms

MGC33901, U2AF1L3, U2af26

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000378975.8U2AF1L4-202765181aaENSP00000368258.2
 
Protein coding
CCDS42551Q8WU68-3 NM_001040425.3MANE Select v0.95Ensembl CanonicalGENCODE basicTSL:1
ENST00000292879.9U2AF1L4-201729202aaENSP00000292879.4
 
Protein coding
CCDS12473Q8WU68-2 -GENCODE basicTSL:1
ENST00000412391.6U2AF1L4-203904220aaENSP00000397645.2
 
Protein coding
-Q8WU68-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000587886.2U2AF1L4-20726310aaENSP00000467441.2
 
Protein coding
-A0A1D5RMU4 -TSL:3CDS 3' incomplete
ENST00000587987.5U2AF1L4-208103639aaENSP00000465170.1
 
Nonsense mediated decay
-K7EJH3 -TSL:1
ENST00000591084.5U2AF1L4-21672340aaENSP00000475046.1
 
Nonsense mediated decay
-S4R443 -TSL:3CDS 5' incomplete
ENST00000594792.5U2AF1L4-21970233aaENSP00000471804.1
 
Nonsense mediated decay
-M0R1E1 -TSL:3CDS 5' incomplete
ENST00000591057.5U2AF1L4-21556151aaENSP00000465242.1
 
Nonsense mediated decay
-K7EJM7 -TSL:4
ENST00000600296.5U2AF1L4-22052571aaENSP00000474493.2
 
Nonsense mediated decay
-S4R3L8 -TSL:3CDS 5' incomplete
ENST00000589429.5U2AF1L4-21252536aaENSP00000473940.1
 
Nonsense mediated decay
-S4R353 -TSL:4CDS 5' incomplete
ENST00000601236.1U2AF1L4-22145566aaENSP00000469891.1
 
Nonsense mediated decay
-M0QYK5 -TSL:3
ENST00000588100.1U2AF1L4-209476No protein-
 
Processed transcript
---TSL:2
ENST00000588892.1U2AF1L4-2102582No protein-
 
Retained intron
---TSL:2
ENST00000588980.5U2AF1L4-2112018No protein-
 
Retained intron
---TSL:2
ENST00000586476.5U2AF1L4-2061930No protein-
 
Retained intron
---TSL:2
ENST00000590135.5U2AF1L4-2131763No protein-
 
Retained intron
---TSL:2
ENST00000585554.5U2AF1L4-2041244No protein-
 
Retained intron
---TSL:2
ENST00000592913.5U2AF1L4-218975No protein-
 
Retained intron
---TSL:2
ENST00000591855.5U2AF1L4-217744No protein-
 
Retained intron
---TSL:2
ENST00000585771.5U2AF1L4-205572No protein-
 
Retained intron
---TSL:3
ENST00000590650.1U2AF1L4-214416No protein-
 
Retained intron
---TSL:3
Description

SS18 subunit of BAF chromatin remodeling complex [Source:HGNC Symbol;Acc:HGNC:11340]

Gene Synonyms

SSXT, SYT

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000415083.7SS18-2033402418aaENSP00000414516.2
 
Protein coding
CCDS32807Q15532-1 NM_001007559.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000542420.6SS18-2052321395aaENSP00000438066.2
 
Protein coding
CCDS77168B4DLD3 -GENCODE basicTSL:2
ENST00000269137.11SS18-2011836387aaENSP00000269137.7
 
Protein coding
CCDS54183Q15532-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000584083.5SS18-224663130aaENSP00000463943.1
 
Protein coding
-J3QQX5 -TSL:4CDS 3' incomplete
ENST00000579061.5SS18-212646152aaENSP00000462766.1
 
Protein coding
-J3KT22 -TSL:3CDS 3' incomplete
ENST00000581021.5SS18-21858870aaENSP00000463586.1
 
Protein coding
-J3QLJ7 -TSL:4CDS 3' incomplete
ENST00000579640.5SS18-213184058aaENSP00000462363.1
 
Nonsense mediated decay
-J3KRP6 -TSL:2
ENST00000269138.9SS18-202154861aaENSP00000269138.5
 
Nonsense mediated decay
-X6R3J2 -TSL:2
ENST00000585121.5SS18-225154584aaENSP00000462838.1
 
Nonsense mediated decay
-J3KT74 -TSL:2
ENST00000539244.6SS18-20497741aaENSP00000441760.2
 
Nonsense mediated decay
-F5GWN1 -TSL:1
ENST00000578954.5SS18-21175660aaENSP00000464664.1
 
Nonsense mediated decay
-J3QS72 -TSL:3
ENST00000582448.5SS18-22158535aaENSP00000464609.1
 
Nonsense mediated decay
-J3QSB3 -TSL:5
ENST00000577636.5SS18-20758055aaENSP00000463933.1
 
Nonsense mediated decay
-J3QQW6 -TSL:3
ENST00000578700.5SS18-21057545aaENSP00000464673.1
 
Nonsense mediated decay
-J3QSG1 -TSL:5
ENST00000581570.5SS18-21957160aaENSP00000464556.1
 
Nonsense mediated decay
-J3QS72 -TSL:5
ENST00000580751.5SS18-21654760aaENSP00000464049.1
 
Nonsense mediated decay
-J3QS72 -TSL:4
ENST00000580642.2SS18-21554558aaENSP00000462104.1
 
Nonsense mediated decay
-J3KRP6 -TSL:4
ENST00000582792.5SS18-22253194aaENSP00000463928.1
 
Nonsense mediated decay
-J3QQW2 -TSL:5
ENST00000577572.5SS18-20651068aaENSP00000463802.1
 
Nonsense mediated decay
-J3QQM2 -TSL:4
ENST00000585241.5SS18-226774No protein-
 
Processed transcript
---TSL:5
ENST00000577751.5SS18-208580No protein-
 
Processed transcript
---TSL:4
ENST00000578595.1SS18-209406No protein-
 
Processed transcript
---TSL:3
ENST00000583595.1SS18-223375No protein-
 
Processed transcript
---TSL:3
ENST00000582092.1SS18-220215No protein-
 
Processed transcript
---TSL:1
ENST00000580958.5SS18-217775No protein-
 
Retained intron
---TSL:2
ENST00000580003.1SS18-214609No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 3, Coding exons: 0, Transcript length: 775 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000580958.5

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x31806080)