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EnsemblEnsembl Home
Description

claudin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1322]

Gene Synonyms

C3orf4, Z38

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000341181.11CLDND1-2012010253aaENSP00000340247.6
 
Protein coding
CCDS2930Q9NY35-1 NM_001040181.2MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000503004.5CLDND1-2082818253aaENSP00000421226.1
 
Protein coding
CCDS2930Q9NY35-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000394180.6CLDND1-2022228253aaENSP00000377734.2
 
Protein coding
CCDS2930Q9NY35-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000394181.6CLDND1-2032170276aaENSP00000377735.3
 
Protein coding
CCDS46877A0A0R4J2F2 -GENCODE basicTSL:1
ENST00000394185.6CLDND1-2042159253aaENSP00000377739.2
 
Protein coding
CCDS2930Q9NY35-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000510545.5CLDND1-2222124253aaENSP00000423590.1
 
Protein coding
CCDS2930Q9NY35-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000513287.5CLDND1-226999253aaENSP00000426869.1
 
Protein coding
CCDS2930Q9NY35-1 -GENCODE basicAPPRIS P1TSL:2
ENST00000511081.5CLDND1-223642158aaENSP00000424669.1
 
Protein coding
CCDS43116Q9NY35-3 -GENCODE basicTSL:2
ENST00000507874.5CLDND1-2151380210aaENSP00000422428.1
 
Protein coding
-D6RC11 -GENCODE basicTSL:3
ENST00000514537.5CLDND1-2301013213aaENSP00000423151.1
 
Protein coding
-D6R9S8 -TSL:3CDS 3' incomplete
ENST00000508902.5CLDND1-220916236aaENSP00000421413.1
 
Protein coding
-D6RFX6 -TSL:3CDS 3' incomplete
ENST00000507944.5CLDND1-216903177aaENSP00000425204.1
 
Protein coding
-D6RDY1 -TSL:4CDS 3' incomplete
ENST00000511667.5CLDND1-224871223aaENSP00000423732.1
 
Protein coding
-D6RCE6 -TSL:3CDS 3' incomplete
ENST00000502299.5CLDND1-206865239aaENSP00000420913.1
 
Protein coding
-D6RDI6 -TSL:2CDS 3' incomplete
ENST00000513452.5CLDND1-227862244aaENSP00000425539.1
 
Protein coding
-D6RCR8 -TSL:3CDS 3' incomplete
ENST00000506885.5CLDND1-212750155aaENSP00000422116.1
 
Protein coding
-H0Y8T9 -TSL:3CDS 5' incomplete
ENST00000508659.5CLDND1-219681172aaENSP00000427658.1
 
Protein coding
-D6RHU6 -TSL:3CDS 3' incomplete
ENST00000515620.5CLDND1-231663180aaENSP00000423093.1
 
Protein coding
-D6RA76 -TSL:3CDS 3' incomplete
ENST00000512147.5CLDND1-225582121aaENSP00000427119.1
 
Protein coding
-D6RCP3 -TSL:3CDS 3' incomplete
ENST00000510541.5CLDND1-221573100aaENSP00000424484.1
 
Protein coding
-D6RB31 -TSL:4CDS 3' incomplete
ENST00000502288.5CLDND1-20556087aaENSP00000423592.1
 
Protein coding
-D6R9K1 -GENCODE basicTSL:4
ENST00000508071.1CLDND1-217556145aaENSP00000425256.1
 
Protein coding
-D6RDP6 -TSL:4CDS 3' incomplete
ENST00000503621.5CLDND1-209539138aaENSP00000427385.1
 
Protein coding
-D6RIU2 -TSL:4CDS 3' incomplete
ENST00000513873.1CLDND1-22853872aaENSP00000426164.1
 
Protein coding
-H0YA53 -TSL:3CDS 5' incomplete
ENST00000506575.1CLDND1-21141489aaENSP00000427042.1
 
Protein coding
-D6RD48 -TSL:3CDS 3' incomplete
ENST00000503799.5CLDND1-210569106aaENSP00000424589.1
 
Nonsense mediated decay
-D6RAZ7 -TSL:5
ENST00000508503.5CLDND1-218707No protein-
 
Processed transcript
---TSL:2
ENST00000507411.5CLDND1-214815No protein-
 
Retained intron
---TSL:2
ENST00000502980.1CLDND1-207778No protein-
 
Retained intron
---TSL:2
ENST00000513988.1CLDND1-229598No protein-
 
Retained intron
---TSL:2
ENST00000506927.1CLDND1-213520No protein-
 
Retained intron
---TSL:2
Description

ADP ribosylation factor 1 [Source:HGNC Symbol;Acc:HGNC:652]

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000272102.10ARF1-2011840181aaENSP00000272102.5
 
Protein coding
CCDS1565A0A024R3Q0 P84077 NM_001658.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000541182.1ARF1-2142006181aaENSP00000440005.1
 
Protein coding
CCDS1565A0A024R3Q0 P84077 -GENCODE basicAPPRIS P1TSL:2
ENST00000540651.5ARF1-2131972181aaENSP00000442980.1
 
Protein coding
CCDS1565A0A024R3Q0 P84077 -GENCODE basicAPPRIS P1TSL:2
ENST00000478424.5ARF1-2091059No protein-
 
Processed transcript
---TSL:2
ENST00000478336.5ARF1-208930No protein-
 
Processed transcript
---TSL:2
ENST00000490705.1ARF1-211881No protein-
 
Processed transcript
---TSL:3
ENST00000470558.5ARF1-203820No protein-
 
Processed transcript
---TSL:2
ENST00000477451.5ARF1-207789No protein-
 
Processed transcript
---TSL:5
ENST00000470670.5ARF1-204712No protein-
 
Processed transcript
---TSL:3
ENST00000469235.5ARF1-202678No protein-
 
Processed transcript
---TSL:3
ENST00000497165.5ARF1-212675No protein-
 
Processed transcript
---TSL:3
ENST00000482962.5ARF1-210597No protein-
 
Processed transcript
---TSL:3
ENST00000473949.5ARF1-206578No protein-
 
Processed transcript
---TSL:5
ENST00000473546.1ARF1-205291No protein-
 
Processed transcript
---TSL:2
Description

microtubule actin crosslinking factor 1 [Source:HGNC Symbol;Acc:HGNC:13664]

Gene Synonyms

ABP620, ACF7, FLJ45612, FLJ46776, KIAA0465, KIAA1251, Lnc-PMIF, MACF

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000564288.6MACF1-230243407555aaENSP00000455274.1
 
Protein coding
-H3BPE1 NM_001394062.1MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:5
ENST00000361689.7MACF1-203176655430aaENSP00000354573.2
 
Protein coding
CCDS435Q9UPN3-2 -GENCODE basicTSL:5
ENST00000567887.5MACF1-231243197592aaENSP00000455823.1
 
Protein coding
-H3BQK9 -GENCODE basicAPPRIS P5TSL:5
ENST00000372915.8MACF1-204234317385aaENSP00000362006.4
 
Protein coding
---GENCODE basicAPPRIS ALT2TSL:5
ENST00000671089.2MACF1-234174335379aaENSP00000499399.1
 
Protein coding
-A0A590UJG2 -GENCODE basic
ENST00000372925.6MACF1-205144964434aaENSP00000362016.2
 
Protein coding
-H0Y390 -TSL:5CDS 5' incomplete
ENST00000683517.1MACF1-23971042276aaENSP00000508231.1
 
Protein coding
---CDS 5' incomplete
ENST00000672812.1MACF1-23565452146aaENSP00000499888.1
 
Protein coding
-A0A5F9ZGX0 -CDS 3' incomplete
ENST00000530262.5MACF1-22862572028aaENSP00000437059.1
 
Protein coding
-E9PNZ4 -TSL:5CDS 3' incomplete
ENST00000530275.3MACF1-22957671668aaENSP00000431179.3
 
Protein coding
-A0A0A6YYJ5 -TSL:NACDS 3' incomplete
ENST00000524432.5MACF1-22643381375aaENSP00000435070.1
 
Protein coding
-E9PLY5 -TSL:5CDS 3' incomplete
ENST00000360115.8MACF1-2022824543aaENSP00000353231.4
 
Protein coding
-H0Y314 -TSL:5CDS 5' incomplete
ENST00000673706.1MACF1-2362788930aaENSP00000501158.1
 
Protein coding
-A0A669KBB0 -CDS 5' and 3' incomplete
ENST00000446276.5MACF1-2082559455aaENSP00000391512.1
 
Protein coding
-H0Y4F5 -TSL:5CDS 5' incomplete
ENST00000442046.5MACF1-2072299368aaENSP00000407776.1
 
Protein coding
-H0Y6T5 -TSL:5CDS 5' incomplete
ENST00000602528.2MACF1-233211038aaENSP00000501156.1
 
Protein coding
-A0A669KB76 -GENCODE basicTSL:NA
ENST00000602421.5MACF1-2321423121aaENSP00000473615.1
 
Protein coding
-B4DQX9 -GENCODE basicTSL:2
ENST00000484793.5MACF1-219834121aaENSP00000434859.1
 
Protein coding
-B4DQX9 -GENCODE basicTSL:2
ENST00000494012.1MACF1-221667113aaENSP00000435892.1
 
Protein coding
-E9PS75 -TSL:4CDS 3' incomplete
ENST00000422234.2MACF1-206477159aaENSP00000412910.2
 
Protein coding
-H0Y7I1 -TSL:5CDS 5' and 3' incomplete
ENST00000673926.1MACF1-237569351aaENSP00000501154.1
 
Nonsense mediated decay
-A0A669KB84 -CDS 5' incomplete
ENST00000496804.5MACF1-22350651062aaENSP00000435078.1
 
Nonsense mediated decay
-E9PLY0 -TSL:5
ENST00000690939.1MACF1-254204076aaENSP00000509485.1
 
Nonsense mediated decay
----
ENST00000673980.1MACF1-2381893495aaENSP00000501071.1
 
Nonsense mediated decay
-A0A669KB06 -CDS 5' incomplete
ENST00000476350.1MACF1-2165304No protein-
 
Processed transcript
---TSL:2
ENST00000497807.1MACF1-2242689No protein-
 
Processed transcript
---TSL:1
ENST00000496360.5MACF1-2222080No protein-
 
Processed transcript
---TSL:2
ENST00000469490.1MACF1-213842No protein-
 
Processed transcript
---TSL:5
ENST00000480624.5MACF1-217642No protein-
 
Processed transcript
---TSL:3
ENST00000462103.1MACF1-209627No protein-
 
Processed transcript
---TSL:3
ENST00000473843.1MACF1-215598No protein-
 
Processed transcript
---TSL:2
ENST00000462496.5MACF1-210526No protein-
 
Processed transcript
---TSL:3
ENST00000469366.1MACF1-212460No protein-
 
Processed transcript
---TSL:3
ENST00000528611.1MACF1-227380No protein-
 
Processed transcript
---TSL:3
ENST00000289893.8MACF1-20119141No protein-
 
Retained intron
---TSL:5
ENST00000686067.1MACF1-2408828No protein-
 
Retained intron
----
ENST00000687997.1MACF1-2478635No protein-
 
Retained intron
----
ENST00000686657.1MACF1-2428149No protein-
 
Retained intron
----
ENST00000691623.1MACF1-2555849No protein-
 
Retained intron
----
ENST00000693209.1MACF1-2565488No protein-
 
Retained intron
----
ENST00000687271.1MACF1-2455243No protein-
 
Retained intron
----
ENST00000690080.1MACF1-2534222No protein-
 
Retained intron
----
ENST00000497964.1MACF1-2254160No protein-
 
Retained intron
---TSL:2
ENST00000472385.2MACF1-2143660No protein-
 
Retained intron
---TSL:3
ENST00000688426.1MACF1-2493170No protein-
 
Retained intron
----
ENST00000689911.1MACF1-2523046No protein-
 
Retained intron
----
ENST00000686687.1MACF1-2433033No protein-
 
Retained intron
----
ENST00000689726.1MACF1-2512916No protein-
 
Retained intron
----
ENST00000686941.1MACF1-2442819No protein-
 
Retained intron
----
ENST00000686260.1MACF1-2412666No protein-
 
Retained intron
----
ENST00000688212.1MACF1-2482645No protein-
 
Retained intron
----
ENST00000688822.1MACF1-2502603No protein-
 
Retained intron
----
ENST00000693546.1MACF1-2582598No protein-
 
Retained intron
----
ENST00000687885.1MACF1-2461518No protein-
 
Retained intron
----
ENST00000693392.1MACF1-2571481No protein-
 
Retained intron
----
ENST00000467673.5MACF1-211792No protein-
 
Retained intron
---TSL:3
ENST00000484393.1MACF1-218750No protein-
 
Retained intron
---TSL:2
ENST00000485063.1MACF1-220438No protein-
 
Retained intron
---TSL:3
Description

PCBP1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:42948]

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000424748.1PCBP1-AS1-221793No protein-
 
Retained intron
--TSL:5
ENST00000628659.2PCBP1-AS1-331922No protein-
 
lncRNA
--Ensembl CanonicalTSL:5
ENST00000682294.1PCBP1-AS1-4404755No protein-
 
lncRNA
--GENCODE basic
ENST00000684630.1PCBP1-AS1-4414136No protein-
 
lncRNA
--GENCODE basic
ENST00000630975.3PCBP1-AS1-3674088No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000419542.5PCBP1-AS1-2144041No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000666075.1PCBP1-AS1-4233908No protein-
 
lncRNA
--GENCODE basic
ENST00000655086.1PCBP1-AS1-3833899No protein-
 
lncRNA
---
ENST00000653606.1PCBP1-AS1-3753740No protein-
 
lncRNA
---
ENST00000653596.1PCBP1-AS1-3743314No protein-
 
lncRNA
---
ENST00000659941.1PCBP1-AS1-3983305No protein-
 
lncRNA
---
ENST00000629943.3PCBP1-AS1-3553287No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000660903.1PCBP1-AS1-4003285No protein-
 
lncRNA
---
ENST00000669583.1PCBP1-AS1-4313254No protein-
 
lncRNA
---
ENST00000668711.1PCBP1-AS1-4293235No protein-
 
lncRNA
---
ENST00000666167.1PCBP1-AS1-4243185No protein-
 
lncRNA
---
ENST00000654336.1PCBP1-AS1-3773154No protein-
 
lncRNA
---
ENST00000416068.6PCBP1-AS1-2093118No protein-
 
lncRNA
--TSL:3
ENST00000655420.1PCBP1-AS1-3862985No protein-
 
lncRNA
---
ENST00000670785.1PCBP1-AS1-4362825No protein-
 
lncRNA
---
ENST00000664754.1PCBP1-AS1-4152817No protein-
 
lncRNA
---
ENST00000666074.1PCBP1-AS1-4222769No protein-
 
lncRNA
---
ENST00000661703.1PCBP1-AS1-4012760No protein-
 
lncRNA
---
ENST00000625955.3PCBP1-AS1-2872733No protein-
 
lncRNA
--TSL:5
ENST00000655058.1PCBP1-AS1-3822690No protein-
 
lncRNA
---
ENST00000661989.1PCBP1-AS1-4032688No protein-
 
lncRNA
---
ENST00000665838.1PCBP1-AS1-4212679No protein-
 
lncRNA
--GENCODE basic
ENST00000654601.1PCBP1-AS1-3782673No protein-
 
lncRNA
---
ENST00000654878.1PCBP1-AS1-3802658No protein-
 
lncRNA
---
ENST00000665172.1PCBP1-AS1-4182646No protein-
 
lncRNA
---
ENST00000663209.1PCBP1-AS1-4082625No protein-
 
lncRNA
---
ENST00000653064.1PCBP1-AS1-3712612No protein-
 
lncRNA
---
ENST00000654958.1PCBP1-AS1-3812605No protein-
 
lncRNA
---
ENST00000656308.1PCBP1-AS1-3882596No protein-
 
lncRNA
---
ENST00000670313.1PCBP1-AS1-4352575No protein-
 
lncRNA
---
ENST00000687961.1PCBP1-AS1-4552573No protein-
 
lncRNA
---
ENST00000630520.3PCBP1-AS1-3622556No protein-
 
lncRNA
--TSL:5
ENST00000654716.1PCBP1-AS1-3792527No protein-
 
lncRNA
---
ENST00000655140.1PCBP1-AS1-3852521No protein-
 
lncRNA
---
ENST00000689275.1PCBP1-AS1-4642514No protein-
 
lncRNA
---
ENST00000422515.6PCBP1-AS1-2192513No protein-
 
lncRNA
--TSL:4
ENST00000663375.1PCBP1-AS1-4092500No protein-
 
lncRNA
---
ENST00000669896.1PCBP1-AS1-4332499No protein-
 
lncRNA
---
ENST00000664419.1PCBP1-AS1-4122497No protein-
 
lncRNA
---
ENST00000656852.1PCBP1-AS1-3902492No protein-
 
lncRNA
---
ENST00000626509.3PCBP1-AS1-2932481No protein-
 
lncRNA
--TSL:5
ENST00000664773.1PCBP1-AS1-4162475No protein-
 
lncRNA
---
ENST00000416395.6PCBP1-AS1-2102457No protein-
 
lncRNA
--TSL:2
ENST00000662103.1PCBP1-AS1-4042451No protein-
 
lncRNA
---
ENST00000449178.6PCBP1-AS1-2362409No protein-
 
lncRNA
--TSL:4
ENST00000425601.6PCBP1-AS1-2232393No protein-
 
lncRNA
--TSL:4
ENST00000435880.6PCBP1-AS1-2272386No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000669570.1PCBP1-AS1-4302356No protein-
 
lncRNA
---
ENST00000670786.1PCBP1-AS1-4372353No protein-
 
lncRNA
--GENCODE basic
ENST00000659531.1PCBP1-AS1-3962331No protein-
 
lncRNA
---
ENST00000664049.1PCBP1-AS1-4112330No protein-
 
lncRNA
---
ENST00000659305.1PCBP1-AS1-3952315No protein-
 
lncRNA
---
ENST00000657575.2PCBP1-AS1-3932304No protein-
 
lncRNA
---
ENST00000656326.1PCBP1-AS1-3892300No protein-
 
lncRNA
---
ENST00000692733.1PCBP1-AS1-4772295No protein-
 
lncRNA
---
ENST00000686055.1PCBP1-AS1-4492287No protein-
 
lncRNA
---
ENST00000670974.1PCBP1-AS1-4392274No protein-
 
lncRNA
---
ENST00000653289.1PCBP1-AS1-3732259No protein-
 
lncRNA
---
ENST00000658454.1PCBP1-AS1-3942242No protein-
 
lncRNA
---
ENST00000653811.1PCBP1-AS1-3762232No protein-
 
lncRNA
---
ENST00000661863.1PCBP1-AS1-4022216No protein-
 
lncRNA
---
ENST00000626558.3PCBP1-AS1-2952205No protein-
 
lncRNA
--TSL:5
ENST00000693279.1PCBP1-AS1-4802182No protein-
 
lncRNA
---
ENST00000439670.6PCBP1-AS1-2302180No protein-
 
lncRNA
--GENCODE basicTSL:2
ENST00000667952.1PCBP1-AS1-4272170No protein-
 
lncRNA
---
ENST00000670036.1PCBP1-AS1-4342156No protein-
 
lncRNA
---
ENST00000668191.1PCBP1-AS1-4282149No protein-
 
lncRNA
---
ENST00000612202.5PCBP1-AS1-2662131No protein-
 
lncRNA
--TSL:5
ENST00000664958.1PCBP1-AS1-4172112No protein-
 
lncRNA
---
ENST00000655481.1PCBP1-AS1-3872105No protein-
 
lncRNA
---
ENST00000688473.1PCBP1-AS1-4602102No protein-
 
lncRNA
---
ENST00000664014.1PCBP1-AS1-4102091No protein-
 
lncRNA
---
ENST00000655096.1PCBP1-AS1-3842077No protein-
 
lncRNA
---
ENST00000657164.1PCBP1-AS1-3911985No protein-
 
lncRNA
---
ENST00000667307.1PCBP1-AS1-4251958No protein-
 
lncRNA
---
ENST00000657291.1PCBP1-AS1-3921931No protein-
 
lncRNA
---
ENST00000629339.3PCBP1-AS1-3431908No protein-
 
lncRNA
--TSL:5
ENST00000458698.6PCBP1-AS1-2431893No protein-
 
lncRNA
--TSL:3
ENST00000437019.2PCBP1-AS1-2281852No protein-
 
lncRNA
--TSL:3
ENST00000670845.1PCBP1-AS1-4381847No protein-
 
lncRNA
--GENCODE basic
ENST00000667874.1PCBP1-AS1-4261835No protein-
 
lncRNA
--GENCODE basic
ENST00000685037.1PCBP1-AS1-4441755No protein-
 
lncRNA
---
ENST00000692564.1PCBP1-AS1-4761718No protein-
 
lncRNA
---
ENST00000662224.1PCBP1-AS1-4051646No protein-
 
lncRNA
---
ENST00000609543.6PCBP1-AS1-2641639No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000420309.6PCBP1-AS1-2161611No protein-
 
lncRNA
--TSL:4
ENST00000669812.1PCBP1-AS1-4321527No protein-
 
lncRNA
---
ENST00000686517.1PCBP1-AS1-4501526No protein-
 
lncRNA
---
ENST00000664533.1PCBP1-AS1-4141498No protein-
 
lncRNA
---
ENST00000653114.1PCBP1-AS1-3721482No protein-
 
lncRNA
---
ENST00000687011.1PCBP1-AS1-4521439No protein-
 
lncRNA
---
ENST00000692107.1PCBP1-AS1-4741437No protein-
 
lncRNA
---
ENST00000693139.1PCBP1-AS1-4791437No protein-
 
lncRNA
---
ENST00000685127.1PCBP1-AS1-4461422No protein-
 
lncRNA
---
ENST00000693753.1PCBP1-AS1-4831406No protein-
 
lncRNA
---
ENST00000689273.1PCBP1-AS1-4631406No protein-
 
lncRNA
---
ENST00000689138.1PCBP1-AS1-4621405No protein-
 
lncRNA
---
ENST00000693048.1PCBP1-AS1-4781404No protein-
 
lncRNA
---
ENST00000690475.1PCBP1-AS1-4681404No protein-
 
lncRNA
---
ENST00000660404.2PCBP1-AS1-3991397No protein-
 
lncRNA
---
ENST00000665708.1PCBP1-AS1-4201385No protein-
 
lncRNA
---
ENST00000688056.1PCBP1-AS1-4571373No protein-
 
lncRNA
---
ENST00000688045.1PCBP1-AS1-4561365No protein-
 
lncRNA
---
ENST00000693581.1PCBP1-AS1-4811356No protein-
 
lncRNA
---
ENST00000457770.6PCBP1-AS1-2401340No protein-
 
lncRNA
--TSL:4
ENST00000630214.2PCBP1-AS1-3571333No protein-
 
lncRNA
--TSL:5
ENST00000659586.1PCBP1-AS1-3971329No protein-
 
lncRNA
---
ENST00000692333.1PCBP1-AS1-4751299No protein-
 
lncRNA
---
ENST00000691445.1PCBP1-AS1-4711297No protein-
 
lncRNA
---
ENST00000687866.1PCBP1-AS1-4531292No protein-
 
lncRNA
---
ENST00000691678.1PCBP1-AS1-4721292No protein-
 
lncRNA
--GENCODE basic
ENST00000665264.1PCBP1-AS1-4191286No protein-
 
lncRNA
---
ENST00000690200.1PCBP1-AS1-4661283No protein-
 
lncRNA
---
ENST00000685918.1PCBP1-AS1-4481274No protein-
 
lncRNA
---
ENST00000625788.3PCBP1-AS1-2831268No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000691287.1PCBP1-AS1-4701268No protein-
 
lncRNA
---
ENST00000684907.1PCBP1-AS1-4431264No protein-
 
lncRNA
---
ENST00000685079.1PCBP1-AS1-4451261No protein-
 
lncRNA
---
ENST00000627327.2PCBP1-AS1-3131257No protein-
 
lncRNA
--TSL:5
ENST00000691987.1PCBP1-AS1-4731249No protein-
 
lncRNA
---
ENST00000629533.2PCBP1-AS1-3491227No protein-
 
lncRNA
--TSL:5
ENST00000688860.1PCBP1-AS1-4611226No protein-
 
lncRNA
---
ENST00000685803.1PCBP1-AS1-4471215No protein-
 
lncRNA
---
ENST00000693628.1PCBP1-AS1-4821213No protein-
 
lncRNA
---
ENST00000594376.6PCBP1-AS1-2441197No protein-
 
lncRNA
--TSL:5
ENST00000452431.5PCBP1-AS1-2371194No protein-
 
lncRNA
--TSL:4
ENST00000664483.1PCBP1-AS1-4131189No protein-
 
lncRNA
---
ENST00000601431.6PCBP1-AS1-2581163No protein-
 
lncRNA
--TSL:5
ENST00000684857.1PCBP1-AS1-4421156No protein-
 
lncRNA
---
ENST00000627918.2PCBP1-AS1-3201146No protein-
 
lncRNA
--TSL:5
ENST00000663033.1PCBP1-AS1-4071136No protein-
 
lncRNA
---
ENST00000689420.1PCBP1-AS1-4651135No protein-
 
lncRNA
--GENCODE basic
ENST00000442040.5PCBP1-AS1-2321111No protein-
 
lncRNA
--TSL:3
ENST00000627181.2PCBP1-AS1-3101099No protein-
 
lncRNA
--TSL:5
ENST00000687898.1PCBP1-AS1-4541068No protein-
 
lncRNA
---
ENST00000628305.2PCBP1-AS1-3251063No protein-
 
lncRNA
--TSL:5
ENST00000630283.2PCBP1-AS1-3591063No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000429599.6PCBP1-AS1-2241045No protein-
 
lncRNA
--TSL:5
ENST00000626515.2PCBP1-AS1-2941041No protein-
 
lncRNA
--TSL:5
ENST00000625625.2PCBP1-AS1-2791025No protein-
 
lncRNA
--TSL:5
ENST00000458686.5PCBP1-AS1-2421020No protein-
 
lncRNA
--TSL:5
ENST00000628308.2PCBP1-AS1-326996No protein-
 
lncRNA
--TSL:5
ENST00000690464.1PCBP1-AS1-467995No protein-
 
lncRNA
---
ENST00000626898.2PCBP1-AS1-304961No protein-
 
lncRNA
--TSL:5
ENST00000602091.1PCBP1-AS1-260959No protein-
 
lncRNA
--TSL:5
ENST00000629605.2PCBP1-AS1-351954No protein-
 
lncRNA
--TSL:5
ENST00000686800.1PCBP1-AS1-451950No protein-
 
lncRNA
---
ENST00000630746.2PCBP1-AS1-365932No protein-
 
lncRNA
--TSL:5
ENST00000630522.2PCBP1-AS1-363927No protein-
 
lncRNA
--TSL:5
ENST00000625447.2PCBP1-AS1-276923No protein-
 
lncRNA
--TSL:5
ENST00000627398.2PCBP1-AS1-314922No protein-
 
lncRNA
--TSL:5
ENST00000617142.4PCBP1-AS1-271918No protein-
 
lncRNA
--TSL:5
ENST00000627050.2PCBP1-AS1-307912No protein-
 
lncRNA
--TSL:5
ENST00000626343.2PCBP1-AS1-289910No protein-
 
lncRNA
--TSL:5
ENST00000439892.6PCBP1-AS1-231907No protein-
 
lncRNA
--TSL:4
ENST00000628920.2PCBP1-AS1-336895No protein-
 
lncRNA
--TSL:5
ENST00000628883.2PCBP1-AS1-335891No protein-
 
lncRNA
--TSL:5
ENST00000630759.2PCBP1-AS1-366891No protein-
 
lncRNA
--TSL:5
ENST00000626574.2PCBP1-AS1-296887No protein-
 
lncRNA
--TSL:5
ENST00000366234.7PCBP1-AS1-201884No protein-
 
lncRNA
--TSL:5
ENST00000456161.5PCBP1-AS1-238880No protein-
 
lncRNA
--TSL:3
ENST00000629603.2PCBP1-AS1-350874No protein-
 
lncRNA
--TSL:5
ENST00000627074.2PCBP1-AS1-308871No protein-
 
lncRNA
--TSL:5
ENST00000628837.2PCBP1-AS1-334866No protein-
 
lncRNA
--TSL:5
ENST00000625518.2PCBP1-AS1-278864No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000418308.5PCBP1-AS1-212863No protein-
 
lncRNA
--TSL:5
ENST00000600002.5PCBP1-AS1-255861No protein-
 
lncRNA
--TSL:5
ENST00000613944.3PCBP1-AS1-269851No protein-
 
lncRNA
--TSL:5
ENST00000631110.2PCBP1-AS1-370851No protein-
 
lncRNA
--TSL:5
ENST00000596028.5PCBP1-AS1-247847No protein-
 
lncRNA
--TSL:5
ENST00000625215.2PCBP1-AS1-272844No protein-
 
lncRNA
--TSL:5
ENST00000631107.2PCBP1-AS1-369840No protein-
 
lncRNA
--TSL:5
ENST00000601494.1PCBP1-AS1-259834No protein-
 
lncRNA
--TSL:5
ENST00000457870.6PCBP1-AS1-241831No protein-
 
lncRNA
--TSL:3
ENST00000629212.2PCBP1-AS1-341827No protein-
 
lncRNA
--TSL:5
ENST00000625783.2PCBP1-AS1-282826No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000688278.1PCBP1-AS1-458826No protein-
 
lncRNA
---
ENST00000627487.3PCBP1-AS1-315815No protein-
 
lncRNA
--TSL:5
ENST00000628551.2PCBP1-AS1-330813No protein-
 
lncRNA
--TSL:5
ENST00000626609.2PCBP1-AS1-297809No protein-
 
lncRNA
--TSL:5
ENST00000444320.5PCBP1-AS1-234809No protein-
 
lncRNA
--TSL:5
ENST00000629909.2PCBP1-AS1-354807No protein-
 
lncRNA
--TSL:5
ENST00000596665.5PCBP1-AS1-250800No protein-
 
lncRNA
--TSL:5
ENST00000596259.3PCBP1-AS1-248791No protein-
 
lncRNA
--TSL:5
ENST00000626370.2PCBP1-AS1-290784No protein-
 
lncRNA
--TSL:5
ENST00000629485.2PCBP1-AS1-347784No protein-
 
lncRNA
--TSL:5
ENST00000629825.2PCBP1-AS1-352778No protein-
 
lncRNA
--TSL:5
ENST00000596573.5PCBP1-AS1-249774No protein-
 
lncRNA
--TSL:5
ENST00000629407.2PCBP1-AS1-345767No protein-
 
lncRNA
--TSL:5
ENST00000628374.2PCBP1-AS1-328766No protein-
 
lncRNA
--TSL:5
ENST00000626495.2PCBP1-AS1-292765No protein-
 
lncRNA
--TSL:5
ENST00000625888.2PCBP1-AS1-286765No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000629084.2PCBP1-AS1-337761No protein-
 
lncRNA
--TSL:5
ENST00000628263.2PCBP1-AS1-324755No protein-
 
lncRNA
--TSL:5
ENST00000628667.2PCBP1-AS1-332745No protein-
 
lncRNA
--TSL:5
ENST00000625864.2PCBP1-AS1-285744No protein-
 
lncRNA
--TSL:5
ENST00000625227.2PCBP1-AS1-273743No protein-
 
lncRNA
--TSL:5
ENST00000413791.5PCBP1-AS1-205743No protein-
 
lncRNA
--TSL:2
ENST00000626842.2PCBP1-AS1-303741No protein-
 
lncRNA
--TSL:5
ENST00000627189.2PCBP1-AS1-311740No protein-
 
lncRNA
--TSL:5
ENST00000604346.5PCBP1-AS1-262736No protein-
 
lncRNA
--TSL:5
ENST00000629184.2PCBP1-AS1-339731No protein-
 
lncRNA
--TSL:5
ENST00000629836.2PCBP1-AS1-353723No protein-
 
lncRNA
--TSL:5
ENST00000629415.2PCBP1-AS1-346723No protein-
 
lncRNA
--TSL:5
ENST00000626735.2PCBP1-AS1-300717No protein-
 
lncRNA
--TSL:5
ENST00000662425.1PCBP1-AS1-406709No protein-
 
lncRNA
---
ENST00000626632.2PCBP1-AS1-298708No protein-
 
lncRNA
--TSL:5
ENST00000629188.2PCBP1-AS1-340705No protein-
 
lncRNA
--TSL:5
ENST00000627542.2PCBP1-AS1-318702No protein-
 
lncRNA
--TSL:5
ENST00000627037.2PCBP1-AS1-306700No protein-
 
lncRNA
--TSL:5
ENST00000626162.2PCBP1-AS1-288696No protein-
 
lncRNA
--TSL:5
ENST00000628322.2PCBP1-AS1-327694No protein-
 
lncRNA
--TSL:5
ENST00000421255.5PCBP1-AS1-217694No protein-
 
lncRNA
--TSL:5
ENST00000598586.1PCBP1-AS1-252693No protein-
 
lncRNA
--TSL:5
ENST00000594548.5PCBP1-AS1-245692No protein-
 
lncRNA
--TSL:5
ENST00000688311.1PCBP1-AS1-459685No protein-
 
lncRNA
---
ENST00000627528.2PCBP1-AS1-316682No protein-
 
lncRNA
--TSL:4
ENST00000601396.5PCBP1-AS1-257679No protein-
 
lncRNA
--TSL:5
ENST00000629374.2PCBP1-AS1-344676No protein-
 
lncRNA
--TSL:5
ENST00000627325.2PCBP1-AS1-312673No protein-
 
lncRNA
--TSL:5
ENST00000442326.1PCBP1-AS1-233668No protein-
 
lncRNA
--GENCODE basicTSL:3
ENST00000629506.2PCBP1-AS1-348667No protein-
 
lncRNA
--TSL:5
ENST00000627630.2PCBP1-AS1-319666No protein-
 
lncRNA
--TSL:5
ENST00000625490.2PCBP1-AS1-277666No protein-
 
lncRNA
--TSL:5
ENST00000599673.5PCBP1-AS1-254665No protein-
 
lncRNA
--TSL:5
ENST00000421843.5PCBP1-AS1-218664No protein-
 
lncRNA
--TSL:5
ENST00000627540.2PCBP1-AS1-317662No protein-
 
lncRNA
--TSL:5
ENST00000599427.5PCBP1-AS1-253662No protein-
 
lncRNA
--TSL:5
ENST00000625439.2PCBP1-AS1-275651No protein-
 
lncRNA
--TSL:5
ENST00000603347.5PCBP1-AS1-261651No protein-
 
lncRNA
--TSL:5
ENST00000625257.2PCBP1-AS1-274648No protein-
 
lncRNA
--TSL:5
ENST00000628102.2PCBP1-AS1-321644No protein-
 
lncRNA
--TSL:5
ENST00000630206.2PCBP1-AS1-356637No protein-
 
lncRNA
--TSL:2
ENST00000630457.2PCBP1-AS1-361635No protein-
 
lncRNA
--TSL:5
ENST00000630685.2PCBP1-AS1-364633No protein-
 
lncRNA
--TSL:5
ENST00000628201.2PCBP1-AS1-323624No protein-
 
lncRNA
--TSL:5
ENST00000595459.5PCBP1-AS1-246624No protein-
 
lncRNA
--TSL:5
ENST00000628757.2PCBP1-AS1-333623No protein-
 
lncRNA
--TSL:5
ENST00000601395.1PCBP1-AS1-256614No protein-
 
lncRNA
--TSL:5
ENST00000627155.2PCBP1-AS1-309610No protein-
 
lncRNA
--TSL:5
ENST00000625838.2PCBP1-AS1-284609No protein-
 
lncRNA
--TSL:5
ENST00000614826.4PCBP1-AS1-270609No protein-
 
lncRNA
--TSL:5
ENST00000690924.1PCBP1-AS1-469605No protein-
 
lncRNA
---
ENST00000413436.5PCBP1-AS1-204602No protein-
 
lncRNA
--TSL:4
ENST00000626769.2PCBP1-AS1-301602No protein-
 
lncRNA
--TSL:5
ENST00000597318.5PCBP1-AS1-251599No protein-
 
lncRNA
--TSL:5
ENST00000630377.2PCBP1-AS1-360598No protein-
 
lncRNA
--TSL:5
ENST00000630985.2PCBP1-AS1-368594No protein-
 
lncRNA
--TSL:5
ENST00000437456.5PCBP1-AS1-229583No protein-
 
lncRNA
--TSL:4
ENST00000432604.5PCBP1-AS1-225569No protein-
 
lncRNA
--TSL:4
ENST00000630280.2PCBP1-AS1-358566No protein-
 
lncRNA
--TSL:5
ENST00000626683.2PCBP1-AS1-299565No protein-
 
lncRNA
--TSL:5
ENST00000434781.5PCBP1-AS1-226565No protein-
 
lncRNA
--TSL:5
ENST00000419963.5PCBP1-AS1-215564No protein-
 
lncRNA
--TSL:3
ENST00000415742.5PCBP1-AS1-208564No protein-
 
lncRNA
--TSL:4
ENST00000413069.5PCBP1-AS1-203563No protein-
 
lncRNA
--TSL:4
ENST00000625691.2PCBP1-AS1-280561No protein-
 
lncRNA
--TSL:5
ENST00000628147.2PCBP1-AS1-322553No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000423402.5PCBP1-AS1-220553No protein-
 
lncRNA
--TSL:4
ENST00000418564.5PCBP1-AS1-213547No protein-
 
lncRNA
--TSL:5
ENST00000411429.5PCBP1-AS1-202547No protein-
 
lncRNA
--TSL:4
ENST00000425333.5PCBP1-AS1-222546No protein-
 
lncRNA
--TSL:4
ENST00000457076.5PCBP1-AS1-239542No protein-
 
lncRNA
--TSL:4
ENST00000416506.5PCBP1-AS1-211542No protein-
 
lncRNA
--TSL:1
ENST00000609075.5PCBP1-AS1-263520No protein-
 
lncRNA
--TSL:5
ENST00000629178.2PCBP1-AS1-338517No protein-
 
lncRNA
--TSL:5
ENST00000415060.6PCBP1-AS1-206507No protein-
 
lncRNA
--TSL:3
ENST00000415222.5PCBP1-AS1-207502No protein-
 
lncRNA
--TSL:4
ENST00000444410.5PCBP1-AS1-235478No protein-
 
lncRNA
--TSL:5
ENST00000626440.2PCBP1-AS1-291461No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000626834.2PCBP1-AS1-302453No protein-
 
lncRNA
--TSL:5
ENST00000612876.4PCBP1-AS1-268417No protein-
 
lncRNA
--TSL:5
ENST00000629304.1PCBP1-AS1-342397No protein-
 
lncRNA
--TSL:5
ENST00000612430.3PCBP1-AS1-267374No protein-
 
lncRNA
--TSL:5
ENST00000610168.1PCBP1-AS1-265365No protein-
 
lncRNA
--TSL:5
ENST00000628455.2PCBP1-AS1-329361No protein-
 
lncRNA
--TSL:5
ENST00000625724.1PCBP1-AS1-281218No protein-
 
lncRNA
--TSL:5
ENST00000627019.1PCBP1-AS1-305208No protein-
 
lncRNA
--TSL:5
Description

mitogen-activated protein kinase kinase kinase kinase 2 [Source:MGI Symbol;Acc:MGI:1346883]

Gene Synonyms

BL44, Rab8ip

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000025897.13Map4k2-2014644821aaENSMUSP00000025897.7
 
Protein coding
CCDS29503Q61161 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000130382.8Map4k2-2081079351aaENSMUSP00000120123.2
 
Protein coding
-D3YUH9 TSL:5CDS 3' incomplete
ENSMUST00000124556.8Map4k2-204425657aaENSMUSP00000121375.2
 
Nonsense mediated decay
-D6RCZ7 TSL:1
ENSMUST00000142496.8Map4k2-213241357aaENSMUSP00000114243.2
 
Nonsense mediated decay
-D6RCZ7 TSL:5
ENSMUST00000155655.8Map4k2-222226770aaENSMUSP00000158007.2
 
Nonsense mediated decay
-A0A494BAA6 TSL:1CDS 5' incomplete
ENSMUST00000128170.8Map4k2-2071080142aaENSMUSP00000121856.2
 
Nonsense mediated decay
-F6RPB0 TSL:5CDS 5' incomplete
ENSMUST00000236640.2Map4k2-223661138aaENSMUSP00000158086.2
 
Nonsense mediated decay
-A0A494BAL9 CDS 5' incomplete
ENSMUST00000152349.8Map4k2-21848558aaENSMUSP00000115741.2
 
Nonsense mediated decay
-D6RG51 TSL:3
ENSMUST00000155569.8Map4k2-221637No protein-
 
Processed transcript
--TSL:3
ENSMUST00000127809.8Map4k2-206552No protein-
 
Processed transcript
--TSL:5
ENSMUST00000149624.8Map4k2-216398No protein-
 
Processed transcript
--TSL:3
ENSMUST00000142862.2Map4k2-214259No protein-
 
Processed transcript
--TSL:5
ENSMUST00000133696.8Map4k2-2095086No protein-
 
Retained intron
--TSL:2
ENSMUST00000123468.9Map4k2-2022875No protein-
 
Retained intron
--TSL:3
ENSMUST00000152259.8Map4k2-2172119No protein-
 
Retained intron
--TSL:1
ENSMUST00000137095.8Map4k2-2111458No protein-
 
Retained intron
--TSL:2
ENSMUST00000124333.8Map4k2-203775No protein-
 
Retained intron
--TSL:5
ENSMUST00000148410.8Map4k2-215647No protein-
 
Retained intron
--TSL:3
ENSMUST00000152912.2Map4k2-219613No protein-
 
Retained intron
--TSL:5
ENSMUST00000126841.2Map4k2-205611No protein-
 
Retained intron
--TSL:3
ENSMUST00000140098.2Map4k2-212518No protein-
 
Retained intron
--TSL:2
ENSMUST00000154900.8Map4k2-220467No protein-
 
Retained intron
--TSL:3
ENSMUST00000134307.2Map4k2-210223No protein-
 
Retained intron
--TSL:5
Description

high mobility group 20A [Source:HGNC Symbol;Acc:HGNC:5001]

Gene Synonyms

FLJ10739, HMGX1, HMGXB1

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000336216.9HMG20A-2013805347aaENSP00000336856.4
 
Protein coding
CCDS10295Q9NP66-1 NM_001304504.2MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000381714.7HMG20A-2024112347aaENSP00000371133.3
 
Protein coding
CCDS10295Q9NP66-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000558845.1HMG20A-206644118aaENSP00000452847.1
 
Protein coding
-H0YKL0 -TSL:2CDS 5' incomplete
ENST00000560498.5HMG20A-210631100aaENSP00000453498.1
 
Protein coding
-H0YM80 -TSL:4CDS 3' incomplete
ENST00000560867.1HMG20A-211559162aaENSP00000452864.1
 
Protein coding
-H0YKM5 -TSL:4CDS 3' incomplete
ENST00000559099.5HMG20A-208558156aaENSP00000454136.1
 
Protein coding
-H0YNS8 -TSL:5CDS 3' incomplete
ENST00000558651.5HMG20A-20549429aaENSP00000453727.1
 
Protein coding
-H0YMS9 -TSL:4CDS 3' incomplete
ENST00000558176.1HMG20A-20347926aaENSP00000452665.1
 
Protein coding
-H0YK55 -TSL:3CDS 3' incomplete
ENST00000559035.5HMG20A-20756384aaENSP00000453592.1
 
Nonsense mediated decay
-H0YMG2 -TSL:4
ENST00000558288.1HMG20A-2043558No protein-
 
Retained intron
---TSL:NA
ENST00000559728.1HMG20A-209981No protein-
 
Retained intron
---TSL:2
ENST00000560986.1HMG20A-212747No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 5, Coding exons: 4, Transcript length: 559 bps, Translation length: 162 residues

Transcript Support Level (TSL)

TSL:4

Incomplete CDS

CDS 3' incomplete

Version

ENST00000560867.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x32b2c750)