Human (GRCh38.p14)
Description

NOVA alternative splicing regulator 1 [Source:HGNC Symbol;Acc:HGNC:7886]

Gene Synonyms

NOVA-1

Location
About this transcript

This transcript has 5 exons, is annotated with 29 domains and features, is associated with 67575 variant alleles and maps to 492 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000539517.7NOVA1-2066990507aaENSP00000438875.2
 
Protein coding
CCDS32061P51513-4 NM_002515.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000465357.6NOVA1-2043573483aaENSP00000447391.1
 
Protein coding
CCDS32060P51513-5 -GENCODE basicTSL:3
ENST00000574031.1NOVA1-2131431152aaENSP00000459545.1
 
Protein coding
I3L2B5 -GENCODE basicTSL:2
ENST00000549571.5NOVA1-2111005173aaENSP00000449185.1
 
Protein coding
F8VWX1 -TSL:4CDS 3' incomplete
ENST00000449198.6NOVA1-203959277aaENSP00000408914.2
 
Protein coding
J3KQU3 -TSL:3CDS 3' incomplete
ENST00000547619.5NOVA1-209947211aaENSP00000448157.1
 
Protein coding
F8W659 -GENCODE basicTSL:3
ENST00000344429.9NOVA1-201896181aaENSP00000342387.5
 
Protein coding
CCDS9635P51513-2 -GENCODE basicTSL:2
ENST00000549146.5NOVA1-21059296aaENSP00000449113.1
 
Protein coding
F8VW64 -TSL:4CDS 3' incomplete
ENST00000347476.10NOVA1-202549109aaENSP00000299472.8
 
Protein coding
G8JLA5 -TSL:4CDS 3' incomplete
ENST00000483536.6NOVA1-2056575121aaENSP00000448956.1
 
Nonsense mediated decay
F8VYI3 -TSL:1
ENST00000546546.1NOVA1-20756349aaENSP00000448144.1
 
Nonsense mediated decay
H0YHZ1 -TSL:4CDS 5' incomplete
ENST00000551754.1NOVA1-212488No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000547415.1NOVA1-208500No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 5, Coding exons: 5, Transcript length: 6,990 bps, Translation length: 507 residues

MANE

This MANE Select transcript contains ENSP00000438875 and matches to NM_002515.3 and NP_002506.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51513

CCDS

This transcript is a member of the Human CCDS set: CCDS32061

Transcript Support Level (TSL)

TSL:1

Version

ENST00000539517.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.