Human (GRCh38.p14)
Description

polypeptide N-acetylgalactosaminyltransferase 6 [Source:HGNC Symbol;Acc:HGNC:4128]

Gene Synonyms

GALNAC-T6

Location
About this transcript

This transcript has 11 exons, is annotated with 15 domains and features, is associated with 13689 variant alleles and maps to 596 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000356317.8GALNT6-2015307622aaENSP00000348668.2
 
Protein coding
CCDS8813Q8NCL4 NM_007210.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000543196.6GALNT6-2025207622aaENSP00000444171.1
 
Protein coding
CCDS8813Q8NCL4 -GENCODE basicAPPRIS P1TSL:1
ENST00000603563.5GALNT6-20669755aaENSP00000473948.1
 
Protein coding
S4R355 -TSL:4CDS 3' incomplete
ENST00000605138.5GALNT6-21562639aaENSP00000473981.1
 
Protein coding
S4R370 -TSL:5CDS 3' incomplete
ENST00000605617.5GALNT6-21758268aaENSP00000473836.1
 
Protein coding
S4R310 -TSL:3CDS 3' incomplete
ENST00000603188.5GALNT6-20358162aaENSP00000474052.1
 
Protein coding
S4R396 -TSL:3CDS 3' incomplete
ENST00000604506.5GALNT6-21157423aaENSP00000474163.1
 
Protein coding
S4R3L4 -TSL:4CDS 3' incomplete
ENST00000604381.5GALNT6-209567137aaENSP00000474101.1
 
Protein coding
S4R3A9 -TSL:3CDS 3' incomplete
ENST00000604847.5GALNT6-212554123aaENSP00000474515.1
 
Protein coding
S4R3M3 -TSL:4CDS 3' incomplete
ENST00000605055.5GALNT6-21354823aaENSP00000474483.1
 
Protein coding
S4R3L4 -TSL:5CDS 3' incomplete
ENST00000604426.5GALNT6-21053878aaENSP00000473918.1
 
Protein coding
S4R345 -TSL:4CDS 3' incomplete
ENST00000603641.1GALNT6-2071859365aaENSP00000474670.1
 
Nonsense mediated decay
S4R3S5 -TSL:1
ENST00000603203.5GALNT6-204557No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000605089.5GALNT6-214555No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000605822.5GALNT6-219549No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000605367.5GALNT6-216494No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000605720.1GALNT6-218476No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000603482.5GALNT6-205372No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000603680.5GALNT6-2082206No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 11, Coding exons: 10, Transcript length: 5,207 bps, Translation length: 622 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NCL4

CCDS

This transcript is a member of the Human CCDS set: CCDS8813

Transcript Support Level (TSL)

TSL:1

Version

ENST00000543196.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.