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EnsemblEnsembl Home
Description

SOX2 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:20209]

Gene Synonyms

DKFZp761J1324, NCRNA00043, SOX2OT

Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000626948.3SOX2-OT-2401584No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basicTSL:5
ENST00000656613.1SOX2-OT-2924289No protein-
 
lncRNA
--GENCODE basic
ENST00000670501.1SOX2-OT-3024282No protein-
 
lncRNA
---
ENST00000665187.1SOX2-OT-2984263No protein-
 
lncRNA
--GENCODE basic
ENST00000671456.1SOX2-OT-3034240No protein-
 
lncRNA
---
ENST00000657986.1SOX2-OT-2934162No protein-
 
lncRNA
---
ENST00000646698.1SOX2-OT-2824109No protein-
 
lncRNA
---
ENST00000660576.1SOX2-OT-2944101No protein-
 
lncRNA
---
ENST00000600801.7SOX2-OT-2344085No protein-
 
lncRNA
--TSL:5
ENST00000661842.1SOX2-OT-2954077No protein-
 
lncRNA
---
ENST00000654649.1SOX2-OT-2914032No protein-
 
lncRNA
---
ENST00000596250.7SOX2-OT-2253985No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000498731.6SOX2-OT-2183964No protein-
 
lncRNA
--TSL:1
ENST00000645583.2SOX2-OT-2753870No protein-
 
lncRNA
---
ENST00000646841.2SOX2-OT-2843868No protein-
 
lncRNA
---
ENST00000654538.1SOX2-OT-2903844No protein-
 
lncRNA
--GENCODE basic
ENST00000665033.1SOX2-OT-2963529No protein-
 
lncRNA
---
ENST00000665112.1SOX2-OT-2973462No protein-
 
lncRNA
---
ENST00000647055.1SOX2-OT-2873274No protein-
 
lncRNA
--GENCODE basic
ENST00000476964.6SOX2-OT-2073226No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000647034.2SOX2-OT-2863006No protein-
 
lncRNA
--GENCODE basic
ENST00000493116.6SOX2-OT-2142779No protein-
 
lncRNA
--TSL:4
ENST00000643236.2SOX2-OT-2672454No protein-
 
lncRNA
--GENCODE basic
ENST00000665485.1SOX2-OT-2992297No protein-
 
lncRNA
--GENCODE basic
ENST00000642685.1SOX2-OT-2632276No protein-
 
lncRNA
--GENCODE basic
ENST00000642301.2SOX2-OT-2602271No protein-
 
lncRNA
--GENCODE basic
ENST00000492337.6SOX2-OT-2132184No protein-
 
lncRNA
--TSL:2
ENST00000667332.1SOX2-OT-3002112No protein-
 
lncRNA
---
ENST00000646296.2SOX2-OT-2792094No protein-
 
lncRNA
---
ENST00000642652.2SOX2-OT-2622042No protein-
 
lncRNA
--GENCODE basic
ENST00000646949.2SOX2-OT-2851980No protein-
 
lncRNA
--GENCODE basic
ENST00000643769.1SOX2-OT-2691967No protein-
 
lncRNA
--GENCODE basic
ENST00000644582.1SOX2-OT-2721884No protein-
 
lncRNA
--GENCODE basic
ENST00000466034.7SOX2-OT-2031772No protein-
 
lncRNA
--TSL:1
ENST00000646683.1SOX2-OT-2811766No protein-
 
lncRNA
--GENCODE basic
ENST00000644358.1SOX2-OT-2711703No protein-
 
lncRNA
--GENCODE basic
ENST00000628810.2SOX2-OT-2481675No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000643667.1SOX2-OT-2681622No protein-
 
lncRNA
---
ENST00000645423.2SOX2-OT-2741583No protein-
 
lncRNA
---
ENST00000642218.1SOX2-OT-2591500No protein-
 
lncRNA
--GENCODE basic
ENST00000642922.1SOX2-OT-2651468No protein-
 
lncRNA
--GENCODE basic
ENST00000642823.1SOX2-OT-2641444No protein-
 
lncRNA
--GENCODE basic
ENST00000626299.4SOX2-OT-2371412No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000646508.1SOX2-OT-2801390No protein-
 
lncRNA
--GENCODE basic
ENST00000597347.5SOX2-OT-2261342No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000690586.1SOX2-OT-3131327No protein-
 
lncRNA
--GENCODE basic
ENST00000642429.1SOX2-OT-2611279No protein-
 
lncRNA
---
ENST00000644732.1SOX2-OT-2731242No protein-
 
lncRNA
---
ENST00000691318.1SOX2-OT-3141240No protein-
 
lncRNA
---
ENST00000493521.5SOX2-OT-2151239No protein-
 
lncRNA
--TSL:3
ENST00000647552.1SOX2-OT-2891238No protein-
 
lncRNA
---
ENST00000645960.1SOX2-OT-2761199No protein-
 
lncRNA
---
ENST00000485035.3SOX2-OT-2091162No protein-
 
lncRNA
--TSL:4
ENST00000644304.1SOX2-OT-2701115No protein-
 
lncRNA
---
ENST00000643131.2SOX2-OT-2661097No protein-
 
lncRNA
---
ENST00000647179.1SOX2-OT-2881068No protein-
 
lncRNA
---
ENST00000693669.1SOX2-OT-3151055No protein-
 
lncRNA
---
ENST00000491282.6SOX2-OT-2121040No protein-
 
lncRNA
--TSL:1
ENST00000627501.4SOX2-OT-2411036No protein-
 
lncRNA
--TSL:5
ENST00000630482.2SOX2-OT-2551012No protein-
 
lncRNA
--TSL:5
ENST00000646712.1SOX2-OT-283989No protein-
 
lncRNA
---
ENST00000476125.5SOX2-OT-206979No protein-
 
lncRNA
--TSL:3
ENST00000631025.2SOX2-OT-258954No protein-
 
lncRNA
--TSL:5
ENST00000630553.1SOX2-OT-256905No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000477928.1SOX2-OT-208902No protein-
 
lncRNA
--TSL:2
ENST00000627530.3SOX2-OT-242873No protein-
 
lncRNA
--TSL:5
ENST00000597828.5SOX2-OT-228864No protein-
 
lncRNA
--TSL:5
ENST00000685767.1SOX2-OT-306859No protein-
 
lncRNA
---
ENST00000595084.3SOX2-OT-222850No protein-
 
lncRNA
--TSL:5
ENST00000628211.2SOX2-OT-244847No protein-
 
lncRNA
--TSL:5
ENST00000599082.2SOX2-OT-231836No protein-
 
lncRNA
--TSL:5
ENST00000685509.1SOX2-OT-305831No protein-
 
lncRNA
---
ENST00000629781.4SOX2-OT-252818No protein-
 
lncRNA
--TSL:5
ENST00000628496.3SOX2-OT-247798No protein-
 
lncRNA
--TSL:5
ENST00000646056.1SOX2-OT-278796No protein-
 
lncRNA
---
ENST00000686782.1SOX2-OT-308794No protein-
 
lncRNA
---
ENST00000688647.1SOX2-OT-310792No protein-
 
lncRNA
---
ENST00000600386.6SOX2-OT-232789No protein-
 
lncRNA
--TSL:5
ENST00000629112.4SOX2-OT-249782No protein-
 
lncRNA
--TSL:5
ENST00000600778.3SOX2-OT-233762No protein-
 
lncRNA
--TSL:5
ENST00000593549.6SOX2-OT-220753No protein-
 
lncRNA
--TSL:5
ENST00000487240.3SOX2-OT-210751No protein-
 
lncRNA
--TSL:5
ENST00000630887.3SOX2-OT-257745No protein-
 
lncRNA
--TSL:5
ENST00000628343.3SOX2-OT-245743No protein-
 
lncRNA
--TSL:5
ENST00000626802.2SOX2-OT-239737No protein-
 
lncRNA
--TSL:5
ENST00000595313.5SOX2-OT-224716No protein-
 
lncRNA
--TSL:5
ENST00000689495.1SOX2-OT-311705No protein-
 
lncRNA
---
ENST00000685088.1SOX2-OT-304694No protein-
 
lncRNA
---
ENST00000627738.1SOX2-OT-243692No protein-
 
lncRNA
--TSL:5
ENST00000686214.1SOX2-OT-307679No protein-
 
lncRNA
---
ENST00000629830.3SOX2-OT-253677No protein-
 
lncRNA
--TSL:5
ENST00000594942.5SOX2-OT-221675No protein-
 
lncRNA
--TSL:5
ENST00000668295.2SOX2-OT-301671No protein-
 
lncRNA
---
ENST00000626619.2SOX2-OT-238660No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630150.2SOX2-OT-254649No protein-
 
lncRNA
--TSL:5
ENST00000597651.6SOX2-OT-227626No protein-
 
lncRNA
--TSL:5
ENST00000693697.1SOX2-OT-316610No protein-
 
lncRNA
---
ENST00000460739.5SOX2-OT-201609No protein-
 
lncRNA
--TSL:4
ENST00000689942.1SOX2-OT-312585No protein-
 
lncRNA
---
ENST00000595287.1SOX2-OT-223581No protein-
 
lncRNA
--TSL:5
ENST00000497122.5SOX2-OT-216578No protein-
 
lncRNA
--TSL:4
ENST00000629273.2SOX2-OT-250575No protein-
 
lncRNA
--TSL:5
ENST00000629552.2SOX2-OT-251572No protein-
 
lncRNA
--TSL:5
ENST00000687464.1SOX2-OT-309569No protein-
 
lncRNA
---
ENST00000461063.6SOX2-OT-202566No protein-
 
lncRNA
--TSL:3
ENST00000469278.5SOX2-OT-204561No protein-
 
lncRNA
--TSL:4
ENST00000498226.5SOX2-OT-217560No protein-
 
lncRNA
--TSL:4
ENST00000598474.4SOX2-OT-229512No protein-
 
lncRNA
--TSL:5
ENST00000625581.2SOX2-OT-236495No protein-
 
lncRNA
--TSL:5
ENST00000600962.6SOX2-OT-235469No protein-
 
lncRNA
--TSL:5
ENST00000593330.1SOX2-OT-219468No protein-
 
lncRNA
--TSL:3
ENST00000472856.1SOX2-OT-205454No protein-
 
lncRNA
--TSL:2
ENST00000628347.1SOX2-OT-246445No protein-
 
lncRNA
--TSL:5
ENST00000645983.1SOX2-OT-277392No protein-
 
lncRNA
---
ENST00000490005.2SOX2-OT-211383No protein-
 
lncRNA
--TSL:2
ENST00000598867.1SOX2-OT-230348No protein-
 
lncRNA
--TSL:5
Description

nascent polypeptide associated complex subunit alpha [Source:HGNC Symbol;Acc:HGNC:7629]

Gene Synonyms

NACA1

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000454682.6NACA-20363872078aaENSP00000403817.1
 
Protein coding
-E9PAV3-1 NM_001365896.1MANE Select v0.95Ensembl CanonicalGENCODE basicTSL:5
ENST00000550952.6NACA-2152918925aaENSP00000448035.1
 
Protein coding
CCDS44925E9PAV3-2 -GENCODE basicTSL:2
ENST00000356769.7NACA-2012690215aaENSP00000349212.3
 
Protein coding
CCDS31837Q13765-1 -GENCODE basicAPPRIS P2TSL:1
ENST00000678066.1NACA-2231242215aaENSP00000503345.1
 
Protein coding
CCDS31837Q13765-1 -GENCODE basicAPPRIS P2
ENST00000552540.5NACA-2201074215aaENSP00000447821.1
 
Protein coding
CCDS31837Q13765-1 -GENCODE basicAPPRIS P2TSL:1
ENST00000393891.8NACA-2021059215aaENSP00000377469.4
 
Protein coding
CCDS31837Q13765-1 -GENCODE basicAPPRIS P2TSL:1
ENST00000546392.6NACA-204964215aaENSP00000446801.1
 
Protein coding
CCDS31837Q13765-1 -GENCODE basicAPPRIS P2TSL:2
ENST00000678047.1NACA-2221417295aaENSP00000503914.1
 
Protein coding
-A0A7I2V473 -GENCODE basic
ENST00000678416.1NACA-2251107136aaENSP00000503685.1
 
Protein coding
-F8VZJ2 -GENCODE basic
ENST00000546862.6NACA-206934136aaENSP00000446933.2
 
Protein coding
-F8VZJ2 -GENCODE basicTSL:3
ENST00000679092.1NACA-226932211aaENSP00000502951.1
 
Protein coding
-A0A7I2V2K5 -GENCODE basicAPPRIS ALT1
ENST00000550920.6NACA-214844235aaENSP00000448039.2
 
Protein coding
-H0YHX9 -GENCODE basicTSL:5
ENST00000548563.5NACA-210827136aaENSP00000447705.1
 
Protein coding
-F8VZJ2 -GENCODE basicTSL:5
ENST00000678376.1NACA-224712136aaENSP00000503564.1
 
Protein coding
-F8VZJ2 -GENCODE basic
ENST00000549855.5NACA-212711126aaENSP00000447764.1
 
Protein coding
-F8VZ58 -TSL:5CDS 3' incomplete
ENST00000549259.5NACA-211690198aaENSP00000447133.1
 
Protein coding
-F8W0W4 -TSL:5CDS 3' incomplete
ENST00000552055.5NACA-219521148aaENSP00000450383.1
 
Protein coding
-F8VNW4 -TSL:5CDS 3' incomplete
ENST00000547914.5NACA-20754372aaENSP00000446745.1
 
Nonsense mediated decay
-F8W029 -TSL:5
ENST00000548084.1NACA-20854234aaENSP00000447207.1
 
Nonsense mediated decay
-F8W0C7 -TSL:3
ENST00000551793.5NACA-218768No protein-
 
Processed transcript
---TSL:2
ENST00000551775.5NACA-217449No protein-
 
Processed transcript
---TSL:5
ENST00000550343.1NACA-213343No protein-
 
Processed transcript
---TSL:2
ENST00000548386.6NACA-2092283No protein-
 
Retained intron
---TSL:2
ENST00000676873.1NACA-2211491No protein-
 
Retained intron
----
ENST00000546410.1NACA-205600No protein-
 
Retained intron
---TSL:2
ENST00000551520.1NACA-216544No protein-
 
Retained intron
---TSL:2
Description

cAMP responsive element modulator [Source:HGNC Symbol;Acc:HGNC:2352]

Gene Synonyms

hCREM-2

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000685392.1CREM-2492857299aaENSP00000509489.1
 
Protein coding
CCDS7181-NM_183011.2MANE Select v0.95Ensembl CanonicalGENCODE basic
ENST00000439705.5CREM-2172306248aaENSP00000409220.2
 
Protein coding
CCDS7182Q03060-26 -GENCODE basicTSL:5
ENST00000686585.1CREM-2502232300aaENSP00000510546.1
 
Protein coding
CCDS7180--GENCODE basicAPPRIS ALT1
ENST00000345491.7CREM-2042220300aaENSP00000265372.5
 
Protein coding
CCDS7180Q03060-16 -GENCODE basicAPPRIS P3TSL:1
ENST00000361599.8CREM-2082170270aaENSP00000354593.4
 
Protein coding
CCDS7185Q03060-12 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000374728.7CREM-2121933221aaENSP00000363860.3
 
Protein coding
CCDS7183Q03060-30 -GENCODE basicTSL:5
ENST00000356917.9CREM-2071895108aaENSP00000349387.5
 
Protein coding
CCDS53518Q03060-9 -GENCODE basicTSL:2
ENST00000348787.6CREM-2051821221aaENSP00000345384.2
 
Protein coding
CCDS7183Q03060-30 -GENCODE basicTSL:1
ENST00000344351.5CREM-203162595aaENSP00000344365.5
 
Protein coding
CCDS53522E9PAR2 -GENCODE basicTSL:2
ENST00000354759.7CREM-2061589248aaENSP00000346804.3
 
Protein coding
CCDS7182Q03060-26 -GENCODE basicTSL:1
ENST00000342105.7CREM-2021541245aaENSP00000341875.3
 
Protein coding
CCDS7186Q03060-7 -GENCODE basicTSL:1
ENST00000460270.5CREM-218141695aaENSP00000420437.1
 
Protein coding
CCDS53522E9PAR2 -GENCODE basicTSL:2
ENST00000374726.7CREM-2111207137aaENSP00000363858.3
 
Protein coding
CCDS7184Q03060-25 -GENCODE basicTSL:1
ENST00000473940.5CREM-2281182120aaENSP00000420681.1
 
Protein coding
CCDS7187Q03060-8 -GENCODE basicTSL:1
ENST00000488328.5CREM-2371049109aaENSP00000417460.1
 
Protein coding
CCDS53519Q03060-11 -GENCODE basicTSL:2
ENST00000474362.5CREM-229103096aaENSP00000419018.1
 
Protein coding
CCDS53523E9PB41 -GENCODE basicTSL:2
ENST00000463314.5CREM-220964138aaENSP00000418336.1
 
Protein coding
CCDS58075Q03060-28 -GENCODE basicTSL:2
ENST00000337656.8CREM-201900299aaENSP00000337138.4
 
Protein coding
CCDS7181Q03060-31 -GENCODE basicTSL:5
ENST00000395887.7CREM-214849282aaENSP00000379225.3
 
Protein coding
CCDS58074Q03060-22 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000489321.5CREM-239731137aaENSP00000419924.1
 
Protein coding
CCDS7184Q03060-25 -GENCODE basicTSL:3
ENST00000374734.7CREM-213711236aaENSP00000363866.3
 
Protein coding
CCDS31181Q03060-32 -GENCODE basicTSL:5
ENST00000488741.5CREM-238651102aaENSP00000419075.1
 
Protein coding
CCDS53521Q03060-23 -GENCODE basicTSL:2
ENST00000474931.5CREM-230626112aaENSP00000417562.1
 
Protein coding
CCDS7188Q03060-24 -GENCODE basicTSL:2
ENST00000468236.5CREM-224582125aaENSP00000419810.1
 
Protein coding
CCDS58076Q03060-29 -GENCODE basicTSL:3
ENST00000490511.1CREM-242469113aaENSP00000417327.1
 
Protein coding
CCDS53520Q03060-27 -GENCODE basicTSL:2
ENST00000487763.5CREM-236429121aaENSP00000417807.1
 
Protein coding
CCDS53517Q03060-10 -GENCODE basicTSL:1
ENST00000374721.7CREM-2102020269aaENSP00000363853.3
 
Protein coding
-G5E998 -GENCODE basicTSL:5
ENST00000429130.7CREM-2161476345aaENSP00000393538.2
 
Protein coding
-Q03060-5 -GENCODE basicTSL:5
ENST00000479070.5CREM-231939312aaENSP00000420511.1
 
Protein coding
-Q03060-15 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000469949.6CREM-22672159aaENSP00000473519.1
 
Protein coding
-R4GN75 -GENCODE basicTSL:3
ENST00000484283.5CREM-234660219aaENSP00000417165.1
 
Protein coding
-J3KR46 -GENCODE basicTSL:5
ENST00000487132.5CREM-235655186aaENSP00000418798.1
 
Protein coding
-C9IYM9 -TSL:5CDS 3' incomplete
ENST00000427847.6CREM-215635156aaENSP00000403938.2
 
Protein coding
-A0A0A0MSU8 -TSL:3CDS 3' incomplete
ENST00000463960.5CREM-221582193aaENSP00000419684.2
 
Protein coding
-C9K092 -TSL:5CDS 5' incomplete
ENST00000494479.5CREM-243563115aaENSP00000417399.1
 
Protein coding
-C9J2J0 -TSL:3CDS 3' incomplete
ENST00000495301.1CREM-24455578aaENSP00000417130.1
 
Protein coding
-C9J5A7 -TSL:4CDS 3' incomplete
ENST00000490460.5CREM-241107462aaENSP00000417058.1
 
Nonsense mediated decay
-F8WB03 -TSL:3
ENST00000495960.5CREM-24589546aaENSP00000420453.1
 
Nonsense mediated decay
-F8WDF2 -TSL:5
ENST00000464475.1CREM-22245353aaENSP00000418450.1
 
Nonsense mediated decay
-H7C4X0 -TSL:5CDS 5' incomplete
ENST00000489388.5CREM-2401022No protein-
 
Processed transcript
---TSL:2
ENST00000472813.1CREM-227955No protein-
 
Processed transcript
---TSL:5
ENST00000469517.1CREM-225910No protein-
 
Processed transcript
---TSL:3
ENST00000497686.1CREM-248839No protein-
 
Processed transcript
---TSL:3
ENST00000461968.5CREM-219747No protein-
 
Processed transcript
---TSL:2
ENST00000374711.5CREM-209722No protein-
 
Processed transcript
---TSL:5
ENST00000482646.5CREM-233715No protein-
 
Processed transcript
---TSL:3
ENST00000496626.5CREM-247596No protein-
 
Processed transcript
---TSL:4
ENST00000496019.5CREM-246563No protein-
 
Processed transcript
---TSL:3
ENST00000466251.5CREM-223485No protein-
 
Processed transcript
---TSL:5
ENST00000482633.5CREM-232415No protein-
 
Retained intron
---TSL:2
Description

JPX transcript, XIST activator [Source:HGNC Symbol;Acc:HGNC:37191]

Gene Synonyms

DCBALD06, ENOX, LINC00183, NCRNA00183

Location
Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000602772.5JPX-2071692No protein-
 
lncRNA
--Ensembl CanonicalTSL:1
ENST00000639185.1JPX-2129658No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000654005.1JPX-2195531No protein-
 
lncRNA
--GENCODE basic
ENST00000664637.1JPX-2565488No protein-
 
lncRNA
---
ENST00000657372.1JPX-2325467No protein-
 
lncRNA
---
ENST00000660856.1JPX-2465352No protein-
 
lncRNA
---
ENST00000667886.1JPX-2665350No protein-
 
lncRNA
---
ENST00000657179.1JPX-2315113No protein-
 
lncRNA
---
ENST00000670408.1JPX-2734686No protein-
 
lncRNA
---
ENST00000668590.1JPX-2694628No protein-
 
lncRNA
---
ENST00000655090.1JPX-2243950No protein-
 
lncRNA
---
ENST00000660836.1JPX-2443758No protein-
 
lncRNA
---
ENST00000660840.1JPX-2453571No protein-
 
lncRNA
---
ENST00000669149.1JPX-2703463No protein-
 
lncRNA
---
ENST00000653479.1JPX-2152753No protein-
 
lncRNA
---
ENST00000670506.1JPX-2762112No protein-
 
lncRNA
--GENCODE basic
ENST00000659254.1JPX-2372067No protein-
 
lncRNA
---
ENST00000668488.1JPX-2681947No protein-
 
lncRNA
---
ENST00000414209.6JPX-2011910No protein-
 
lncRNA
--TSL:2
ENST00000671207.1JPX-2811893No protein-
 
lncRNA
---
ENST00000670994.1JPX-2791852No protein-
 
lncRNA
---
ENST00000663027.1JPX-2521818No protein-
 
lncRNA
---
ENST00000655879.1JPX-2251817No protein-
 
lncRNA
---
ENST00000657910.1JPX-2341746No protein-
 
lncRNA
---
ENST00000671336.1JPX-2821746No protein-
 
lncRNA
---
ENST00000665032.1JPX-2571744No protein-
 
lncRNA
---
ENST00000667057.1JPX-2621726No protein-
 
lncRNA
---
ENST00000670685.1JPX-2771689No protein-
 
lncRNA
---
ENST00000661130.1JPX-2471675No protein-
 
lncRNA
---
ENST00000671476.1JPX-2831624No protein-
 
lncRNA
---
ENST00000640437.1JPX-2131620No protein-
 
lncRNA
--TSL:5
ENST00000658649.1JPX-2351561No protein-
 
lncRNA
---
ENST00000667937.1JPX-2671533No protein-
 
lncRNA
---
ENST00000659373.1JPX-2381525No protein-
 
lncRNA
---
ENST00000662120.1JPX-2491492No protein-
 
lncRNA
---
ENST00000659849.1JPX-2401492No protein-
 
lncRNA
---
ENST00000664295.1JPX-2541469No protein-
 
lncRNA
---
ENST00000670192.1JPX-2721452No protein-
 
lncRNA
---
ENST00000662239.1JPX-2501442No protein-
 
lncRNA
---
ENST00000653885.1JPX-2171422No protein-
 
lncRNA
---
ENST00000670464.1JPX-2741395No protein-
 
lncRNA
---
ENST00000670805.1JPX-2781395No protein-
 
lncRNA
---
ENST00000655994.1JPX-2261388No protein-
 
lncRNA
---
ENST00000654137.1JPX-2201377No protein-
 
lncRNA
---
ENST00000667645.1JPX-2651364No protein-
 
lncRNA
---
ENST00000659023.1JPX-2361316No protein-
 
lncRNA
---
ENST00000660546.1JPX-2431292No protein-
 
lncRNA
---
ENST00000669168.1JPX-2711292No protein-
 
lncRNA
---
ENST00000656263.1JPX-2271249No protein-
 
lncRNA
---
ENST00000665345.1JPX-2581244No protein-
 
lncRNA
---
ENST00000602938.6JPX-2101242No protein-
 
lncRNA
--TSL:2
ENST00000666059.1JPX-2591223No protein-
 
lncRNA
---
ENST00000661546.1JPX-2481217No protein-
 
lncRNA
---
ENST00000670503.1JPX-2751216No protein-
 
lncRNA
---
ENST00000653808.1JPX-2161213No protein-
 
lncRNA
---
ENST00000656624.1JPX-2291195No protein-
 
lncRNA
---
ENST00000602737.6JPX-2061166No protein-
 
lncRNA
--TSL:3
ENST00000654995.1JPX-2231162No protein-
 
lncRNA
---
ENST00000656509.1JPX-2281132No protein-
 
lncRNA
---
ENST00000671021.1JPX-2801109No protein-
 
lncRNA
---
ENST00000659622.1JPX-2391100No protein-
 
lncRNA
---
ENST00000659852.1JPX-2411096No protein-
 
lncRNA
---
ENST00000653069.1JPX-2141005No protein-
 
lncRNA
---
ENST00000654196.1JPX-221999No protein-
 
lncRNA
---
ENST00000664328.1JPX-255991No protein-
 
lncRNA
---
ENST00000667573.1JPX-264962No protein-
 
lncRNA
---
ENST00000662543.1JPX-251930No protein-
 
lncRNA
---
ENST00000666493.1JPX-261882No protein-
 
lncRNA
---
ENST00000667294.1JPX-263864No protein-
 
lncRNA
---
ENST00000660087.1JPX-242853No protein-
 
lncRNA
---
ENST00000671518.1JPX-284845No protein-
 
lncRNA
---
ENST00000602895.6JPX-208843No protein-
 
lncRNA
--TSL:3
ENST00000602294.6JPX-204782No protein-
 
lncRNA
--TSL:2
ENST00000602546.5JPX-205762No protein-
 
lncRNA
--TSL:3
ENST00000602920.6JPX-209753No protein-
 
lncRNA
--TSL:2
ENST00000653929.1JPX-218739No protein-
 
lncRNA
---
ENST00000666318.1JPX-260705No protein-
 
lncRNA
---
ENST00000602985.6JPX-211633No protein-
 
lncRNA
--TSL:3
ENST00000654374.1JPX-222606No protein-
 
lncRNA
---
ENST00000657638.1JPX-233561No protein-
 
lncRNA
---
ENST00000663470.1JPX-253554No protein-
 
lncRNA
---
ENST00000657096.1JPX-230488No protein-
 
lncRNA
---
ENST00000453317.1JPX-203483No protein-
 
lncRNA
--TSL:2
ENST00000415215.1JPX-202475No protein-
 
lncRNA
--TSL:5
Description

SOX2 overlapping transcript [Source:HGNC Symbol;Acc:HGNC:20209]

Gene Synonyms

DKFZp761J1324, NCRNA00043, SOX2OT

Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000626948.3SOX2-OT-2401584No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basicTSL:5
ENST00000656613.1SOX2-OT-2924289No protein-
 
lncRNA
--GENCODE basic
ENST00000670501.1SOX2-OT-3024282No protein-
 
lncRNA
---
ENST00000665187.1SOX2-OT-2984263No protein-
 
lncRNA
--GENCODE basic
ENST00000671456.1SOX2-OT-3034240No protein-
 
lncRNA
---
ENST00000657986.1SOX2-OT-2934162No protein-
 
lncRNA
---
ENST00000646698.1SOX2-OT-2824109No protein-
 
lncRNA
---
ENST00000660576.1SOX2-OT-2944101No protein-
 
lncRNA
---
ENST00000600801.7SOX2-OT-2344085No protein-
 
lncRNA
--TSL:5
ENST00000661842.1SOX2-OT-2954077No protein-
 
lncRNA
---
ENST00000654649.1SOX2-OT-2914032No protein-
 
lncRNA
---
ENST00000596250.7SOX2-OT-2253985No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000498731.6SOX2-OT-2183964No protein-
 
lncRNA
--TSL:1
ENST00000645583.2SOX2-OT-2753870No protein-
 
lncRNA
---
ENST00000646841.2SOX2-OT-2843868No protein-
 
lncRNA
---
ENST00000654538.1SOX2-OT-2903844No protein-
 
lncRNA
--GENCODE basic
ENST00000665033.1SOX2-OT-2963529No protein-
 
lncRNA
---
ENST00000665112.1SOX2-OT-2973462No protein-
 
lncRNA
---
ENST00000647055.1SOX2-OT-2873274No protein-
 
lncRNA
--GENCODE basic
ENST00000476964.6SOX2-OT-2073226No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000647034.2SOX2-OT-2863006No protein-
 
lncRNA
--GENCODE basic
ENST00000493116.6SOX2-OT-2142779No protein-
 
lncRNA
--TSL:4
ENST00000643236.2SOX2-OT-2672454No protein-
 
lncRNA
--GENCODE basic
ENST00000665485.1SOX2-OT-2992297No protein-
 
lncRNA
--GENCODE basic
ENST00000642685.1SOX2-OT-2632276No protein-
 
lncRNA
--GENCODE basic
ENST00000642301.2SOX2-OT-2602271No protein-
 
lncRNA
--GENCODE basic
ENST00000492337.6SOX2-OT-2132184No protein-
 
lncRNA
--TSL:2
ENST00000667332.1SOX2-OT-3002112No protein-
 
lncRNA
---
ENST00000646296.2SOX2-OT-2792094No protein-
 
lncRNA
---
ENST00000642652.2SOX2-OT-2622042No protein-
 
lncRNA
--GENCODE basic
ENST00000646949.2SOX2-OT-2851980No protein-
 
lncRNA
--GENCODE basic
ENST00000643769.1SOX2-OT-2691967No protein-
 
lncRNA
--GENCODE basic
ENST00000644582.1SOX2-OT-2721884No protein-
 
lncRNA
--GENCODE basic
ENST00000466034.7SOX2-OT-2031772No protein-
 
lncRNA
--TSL:1
ENST00000646683.1SOX2-OT-2811766No protein-
 
lncRNA
--GENCODE basic
ENST00000644358.1SOX2-OT-2711703No protein-
 
lncRNA
--GENCODE basic
ENST00000628810.2SOX2-OT-2481675No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000643667.1SOX2-OT-2681622No protein-
 
lncRNA
---
ENST00000645423.2SOX2-OT-2741583No protein-
 
lncRNA
---
ENST00000642218.1SOX2-OT-2591500No protein-
 
lncRNA
--GENCODE basic
ENST00000642922.1SOX2-OT-2651468No protein-
 
lncRNA
--GENCODE basic
ENST00000642823.1SOX2-OT-2641444No protein-
 
lncRNA
--GENCODE basic
ENST00000626299.4SOX2-OT-2371412No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000646508.1SOX2-OT-2801390No protein-
 
lncRNA
--GENCODE basic
ENST00000597347.5SOX2-OT-2261342No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000690586.1SOX2-OT-3131327No protein-
 
lncRNA
--GENCODE basic
ENST00000642429.1SOX2-OT-2611279No protein-
 
lncRNA
---
ENST00000644732.1SOX2-OT-2731242No protein-
 
lncRNA
---
ENST00000691318.1SOX2-OT-3141240No protein-
 
lncRNA
---
ENST00000493521.5SOX2-OT-2151239No protein-
 
lncRNA
--TSL:3
ENST00000647552.1SOX2-OT-2891238No protein-
 
lncRNA
---
ENST00000645960.1SOX2-OT-2761199No protein-
 
lncRNA
---
ENST00000485035.3SOX2-OT-2091162No protein-
 
lncRNA
--TSL:4
ENST00000644304.1SOX2-OT-2701115No protein-
 
lncRNA
---
ENST00000643131.2SOX2-OT-2661097No protein-
 
lncRNA
---
ENST00000647179.1SOX2-OT-2881068No protein-
 
lncRNA
---
ENST00000693669.1SOX2-OT-3151055No protein-
 
lncRNA
---
ENST00000491282.6SOX2-OT-2121040No protein-
 
lncRNA
--TSL:1
ENST00000627501.4SOX2-OT-2411036No protein-
 
lncRNA
--TSL:5
ENST00000630482.2SOX2-OT-2551012No protein-
 
lncRNA
--TSL:5
ENST00000646712.1SOX2-OT-283989No protein-
 
lncRNA
---
ENST00000476125.5SOX2-OT-206979No protein-
 
lncRNA
--TSL:3
ENST00000631025.2SOX2-OT-258954No protein-
 
lncRNA
--TSL:5
ENST00000630553.1SOX2-OT-256905No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000477928.1SOX2-OT-208902No protein-
 
lncRNA
--TSL:2
ENST00000627530.3SOX2-OT-242873No protein-
 
lncRNA
--TSL:5
ENST00000597828.5SOX2-OT-228864No protein-
 
lncRNA
--TSL:5
ENST00000685767.1SOX2-OT-306859No protein-
 
lncRNA
---
ENST00000595084.3SOX2-OT-222850No protein-
 
lncRNA
--TSL:5
ENST00000628211.2SOX2-OT-244847No protein-
 
lncRNA
--TSL:5
ENST00000599082.2SOX2-OT-231836No protein-
 
lncRNA
--TSL:5
ENST00000685509.1SOX2-OT-305831No protein-
 
lncRNA
---
ENST00000629781.4SOX2-OT-252818No protein-
 
lncRNA
--TSL:5
ENST00000628496.3SOX2-OT-247798No protein-
 
lncRNA
--TSL:5
ENST00000646056.1SOX2-OT-278796No protein-
 
lncRNA
---
ENST00000686782.1SOX2-OT-308794No protein-
 
lncRNA
---
ENST00000688647.1SOX2-OT-310792No protein-
 
lncRNA
---
ENST00000600386.6SOX2-OT-232789No protein-
 
lncRNA
--TSL:5
ENST00000629112.4SOX2-OT-249782No protein-
 
lncRNA
--TSL:5
ENST00000600778.3SOX2-OT-233762No protein-
 
lncRNA
--TSL:5
ENST00000593549.6SOX2-OT-220753No protein-
 
lncRNA
--TSL:5
ENST00000487240.3SOX2-OT-210751No protein-
 
lncRNA
--TSL:5
ENST00000630887.3SOX2-OT-257745No protein-
 
lncRNA
--TSL:5
ENST00000628343.3SOX2-OT-245743No protein-
 
lncRNA
--TSL:5
ENST00000626802.2SOX2-OT-239737No protein-
 
lncRNA
--TSL:5
ENST00000595313.5SOX2-OT-224716No protein-
 
lncRNA
--TSL:5
ENST00000689495.1SOX2-OT-311705No protein-
 
lncRNA
---
ENST00000685088.1SOX2-OT-304694No protein-
 
lncRNA
---
ENST00000627738.1SOX2-OT-243692No protein-
 
lncRNA
--TSL:5
ENST00000686214.1SOX2-OT-307679No protein-
 
lncRNA
---
ENST00000629830.3SOX2-OT-253677No protein-
 
lncRNA
--TSL:5
ENST00000594942.5SOX2-OT-221675No protein-
 
lncRNA
--TSL:5
ENST00000668295.2SOX2-OT-301671No protein-
 
lncRNA
---
ENST00000626619.2SOX2-OT-238660No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630150.2SOX2-OT-254649No protein-
 
lncRNA
--TSL:5
ENST00000597651.6SOX2-OT-227626No protein-
 
lncRNA
--TSL:5
ENST00000693697.1SOX2-OT-316610No protein-
 
lncRNA
---
ENST00000460739.5SOX2-OT-201609No protein-
 
lncRNA
--TSL:4
ENST00000689942.1SOX2-OT-312585No protein-
 
lncRNA
---
ENST00000595287.1SOX2-OT-223581No protein-
 
lncRNA
--TSL:5
ENST00000497122.5SOX2-OT-216578No protein-
 
lncRNA
--TSL:4
ENST00000629273.2SOX2-OT-250575No protein-
 
lncRNA
--TSL:5
ENST00000629552.2SOX2-OT-251572No protein-
 
lncRNA
--TSL:5
ENST00000687464.1SOX2-OT-309569No protein-
 
lncRNA
---
ENST00000461063.6SOX2-OT-202566No protein-
 
lncRNA
--TSL:3
ENST00000469278.5SOX2-OT-204561No protein-
 
lncRNA
--TSL:4
ENST00000498226.5SOX2-OT-217560No protein-
 
lncRNA
--TSL:4
ENST00000598474.4SOX2-OT-229512No protein-
 
lncRNA
--TSL:5
ENST00000625581.2SOX2-OT-236495No protein-
 
lncRNA
--TSL:5
ENST00000600962.6SOX2-OT-235469No protein-
 
lncRNA
--TSL:5
ENST00000593330.1SOX2-OT-219468No protein-
 
lncRNA
--TSL:3
ENST00000472856.1SOX2-OT-205454No protein-
 
lncRNA
--TSL:2
ENST00000628347.1SOX2-OT-246445No protein-
 
lncRNA
--TSL:5
ENST00000645983.1SOX2-OT-277392No protein-
 
lncRNA
---
ENST00000490005.2SOX2-OT-211383No protein-
 
lncRNA
--TSL:2
ENST00000598867.1SOX2-OT-230348No protein-
 
lncRNA
--TSL:5
Description

paired box 6 [Source:HGNC Symbol;Acc:HGNC:8620]

Gene Synonyms

AN, AN1, AN2, D11S812E, WAGR

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000640368.2PAX6-2682743436aaENSP00000492024.1
 
Protein coding
CCDS31452P26367-2 NM_001368894.2MANE Select v0.95Ensembl CanonicalGENCODE basicTSL:5
ENST00000643871.1PAX6-2816944422aaENSP00000495109.1
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1
ENST00000638914.3PAX6-2436922436aaENSP00000492315.2
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:1
ENST00000606377.7PAX6-2306888436aaENSP00000480026.1
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:5
ENST00000419022.6PAX6-2096888436aaENSP00000404100.1
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:1
ENST00000639386.2PAX6-2536509286aaENSP00000492658.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:5
ENST00000379109.7PAX6-2033182422aaENSP00000368403.2
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:2
ENST00000638629.1PAX6-2342844286aaENSP00000490971.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:2
ENST00000640610.1PAX6-2712730422aaENSP00000491295.1
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000639916.1PAX6-2572622422aaENSP00000490963.1
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000379129.7PAX6-2072614436aaENSP00000368424.2
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:5
ENST00000379107.7PAX6-2022579436aaENSP00000368401.2
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:5
ENST00000379132.8PAX6-2082576422aaENSP00000368427.2
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000640975.1PAX6-2802553436aaENSP00000491872.1
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:1
ENST00000639409.1PAX6-2552450436aaENSP00000492476.1
 
Protein coding
CCDS31452P26367-2 -GENCODE basicTSL:1
ENST00000639034.2PAX6-2471794401aaENSP00000491679.1
 
Protein coding
CCDS86190D1KF47 -GENCODE basicTSL:5
ENST00000241001.13PAX6-2011736422aaENSP00000241001.8
 
Protein coding
CCDS31451P26367-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000481563.6PAX6-2171587286aaENSP00000492205.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:5
ENST00000639548.1PAX6-2561417286aaENSP00000491944.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:5
ENST00000640125.1PAX6-2621375286aaENSP00000492166.1
 
Protein coding
CCDS86189A0A1W2PRA8 -GENCODE basicTSL:5
ENST00000639109.1PAX6-2512734277aaENSP00000491904.1
 
Protein coding
-A0A1W2PQ31 -TSL:5CDS 3' incomplete
ENST00000639079.1PAX6-2502608263aaENSP00000492129.1
 
Protein coding
-A0A1W2PQJ8 -TSL:5CDS 3' incomplete
ENST00000639943.1PAX6-2592584314aaENSP00000491229.1
 
Protein coding
-A0A1W2PPM5 -TSL:5CDS 3' incomplete
ENST00000638762.1PAX6-2382580238aaENSP00000491517.1
 
Protein coding
-A0A1W2PPG3 -TSL:5CDS 3' incomplete
ENST00000638685.1PAX6-2352372302aaENSP00000492316.1
 
Protein coding
-A0A1W2PRH6 -GENCODE basicTSL:5
ENST00000640872.1PAX6-2782367281aaENSP00000491065.1
 
Protein coding
-A0A1W2PNS7 -TSL:1CDS 3' incomplete
ENST00000524853.6PAX6-2192221417aaENSP00000431585.2
 
Protein coding
-E9PKM0 -TSL:5CDS 3' incomplete
ENST00000639950.1PAX6-2602133419aaENSP00000491862.1
 
Protein coding
-A0A1W2PQA8 -TSL:5CDS 3' incomplete
ENST00000640431.1PAX6-2692037370aaENSP00000491779.1
 
Protein coding
-A0A1W2PQL7 -TSL:5CDS 3' incomplete
ENST00000379123.10PAX6-2061923282aaENSP00000368418.6
 
Protein coding
-A0A1W2PPJ2 -TSL:5CDS 3' incomplete
ENST00000638346.1PAX6-2331863260aaENSP00000491267.1
 
Protein coding
-A0A1W2PP27 -TSL:5CDS 3' incomplete
ENST00000640766.1PAX6-2761797283aaENSP00000491214.1
 
Protein coding
-A0A1W2PPH0 -TSL:5CDS 3' incomplete
ENST00000640460.1PAX6-2701736413aaENSP00000492802.1
 
Protein coding
-A0A1W2PSA8 -TSL:5CDS 3' incomplete
ENST00000379111.7PAX6-2041718419aaENSP00000368406.3
 
Protein coding
-A0A1W2PQA8 -TSL:5CDS 3' incomplete
ENST00000638963.1PAX6-2441580473aaENSP00000491948.1
 
Protein coding
-A0A1W2PQG7 -GENCODE basicTSL:5
ENST00000640684.1PAX6-2741557415aaENSP00000491492.1
 
Protein coding
-A0A1W2PPN2 -GENCODE basicTSL:5
ENST00000379115.9PAX6-2051531335aaENSP00000368410.5
 
Protein coding
-A0A1X7SBT0 -TSL:5CDS 3' incomplete
ENST00000640613.1PAX6-2721525368aaENSP00000492587.1
 
Protein coding
-A0A1W2PRG3 -TSL:5CDS 3' incomplete
ENST00000423822.7PAX6-2101521367aaENSP00000388132.3
 
Protein coding
-B1B1I9 -TSL:5CDS 3' incomplete
ENST00000639006.1PAX6-2461507249aaENSP00000491210.1
 
Protein coding
-A0A1W2PP89 -TSL:5CDS 3' incomplete
ENST00000638802.1PAX6-2391505263aaENSP00000492437.1
 
Protein coding
-A0A1W2PRU4 -TSL:5CDS 3' incomplete
ENST00000640287.1PAX6-2661485422aaENSP00000492822.1
 
Protein coding
-P26367-1 -TSL:1CDS 3' incomplete
ENST00000638250.1PAX6-2311483282aaENSP00000491365.1
 
Protein coding
-A0A1W2PPJ2 -TSL:5CDS 3' incomplete
ENST00000639061.1PAX6-2491473283aaENSP00000491324.1
 
Protein coding
-A0A1W2PPH0 -TSL:5CDS 3' incomplete
ENST00000438681.6PAX6-2111395320aaENSP00000404356.2
 
Protein coding
-B1B1I8 -TSL:5CDS 3' incomplete
ENST00000638878.1PAX6-2411369231aaENSP00000492081.1
 
Protein coding
-A0A1W2PQG3 -TSL:5CDS 3' incomplete
ENST00000640242.1PAX6-2641298341aaENSP00000492409.1
 
Protein coding
-A0A1W2PRS6 -TSL:5CDS 3' incomplete
ENST00000640963.1PAX6-2791267382aaENSP00000492397.1
 
Protein coding
-A0A1W2PRA4 -TSL:5CDS 3' incomplete
ENST00000638853.1PAX6-2401248277aaENSP00000491280.1
 
Protein coding
-A0A1W2PQ31 -TSL:5CDS 3' incomplete
ENST00000638696.1PAX6-2361203400aaENSP00000492756.1
 
Protein coding
-A0A1W2PS91 -GENCODE basicTSL:5
ENST00000455099.6PAX6-2121202241aaENSP00000397384.2
 
Protein coding
-B1B1J0 -TSL:5CDS 3' incomplete
ENST00000638755.1PAX6-2371161386aaENSP00000492181.1
 
Protein coding
-A0A1W2PQM7 -GENCODE basicTSL:5
ENST00000638965.1PAX6-245979221aaENSP00000492769.1
 
Protein coding
-A0A1W2PSB5 -GENCODE basicTSL:5
ENST00000640335.1PAX6-267964205aaENSP00000492808.1
 
Protein coding
-A0A1W2PRW7 -TSL:5CDS 3' incomplete
ENST00000639920.1PAX6-25867672aaENSP00000492111.1
 
Protein coding
-A0A1W2PR58 -TSL:5CDS 3' incomplete
ENST00000639394.1PAX6-2541988163aaENSP00000492177.1
 
Nonsense mediated decay
-A0A1W2PQW3 -TSL:5
ENST00000533156.2PAX6-226848No protein-
 
Processed transcript
---TSL:5
ENST00000464174.6PAX6-213846No protein-
 
Processed transcript
---TSL:5
ENST00000530373.6PAX6-221785No protein-
 
Processed transcript
---TSL:5
ENST00000530714.6PAX6-222650No protein-
 
Processed transcript
---TSL:5
ENST00000640251.1PAX6-265649No protein-
 
Processed transcript
---TSL:5
ENST00000534353.5PAX6-228540No protein-
 
Processed transcript
---TSL:4
ENST00000639203.1PAX6-252532No protein-
 
Processed transcript
---TSL:5
ENST00000638278.1PAX6-232417No protein-
 
Processed transcript
---TSL:NA
ENST00000640617.1PAX6-273412No protein-
 
Processed transcript
---TSL:4
ENST00000640819.1PAX6-277368No protein-
 
Processed transcript
---TSL:5
ENST00000533333.5PAX6-2276173No protein-
 
Retained intron
---TSL:2
ENST00000474783.2PAX6-2164392No protein-
 
Retained intron
---TSL:5
ENST00000470027.7PAX6-2143587No protein-
 
Retained intron
---TSL:2
ENST00000640172.1PAX6-2632525No protein-
 
Retained intron
---TSL:5
ENST00000471303.6PAX6-2152423No protein-
 
Retained intron
---TSL:5
ENST00000638913.1PAX6-2422390No protein-
 
Retained intron
---TSL:5
ENST00000639054.1PAX6-2482254No protein-
 
Retained intron
---TSL:5
ENST00000640735.1PAX6-2752060No protein-
 
Retained intron
---TSL:5
ENST00000531910.6PAX6-2231958No protein-
 
Retained intron
---TSL:5
ENST00000494377.7PAX6-2181911No protein-
 
Retained intron
---TSL:5
ENST00000534390.2PAX6-2291084No protein-
 
Retained intron
---TSL:5
ENST00000640038.1PAX6-261781No protein-
 
Retained intron
---TSL:2
ENST00000532916.5PAX6-225627No protein-
 
Retained intron
---TSL:3
ENST00000532175.5PAX6-224524No protein-
 
Retained intron
---TSL:3
ENST00000527769.5PAX6-220487No protein-
 
Retained intron
---TSL:3
Description

dachsous cadherin-related 2 [Source:HGNC Symbol;Acc:HGNC:23111]

Gene Synonyms

CDH27, CDHJ, CDHR7, FLJ20047, PCDH23, PCDHJ

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000639062.3DCHS2-211133543371aaENSP00000491252.2
 
Protein coding
-Q6V1P9-1 -Ensembl CanonicalGENCODE basic
ENST00000639512.1DCHS2-21250641369aaENSP00000492852.1
 
Protein coding
-Q6V1P9-5 -GENCODE basic
ENST00000638949.2DCHS2-21011249No protein-
 
Processed transcript
----
ENST00000640896.1DCHS2-2162109No protein-
 
Processed transcript
----
ENST00000640742.1DCHS2-215857No protein-
 
Processed transcript
----
ENST00000638365.1DCHS2-209569No protein-
 
Processed transcript
----
ENST00000640328.1DCHS2-214512No protein-
 
Processed transcript
----
ENST00000640089.1DCHS2-2132280No protein-
 
Retained intron
----
Description

scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]

Gene Synonyms

CD36L2, HLGP85, LIMP-2, LIMPII, SR-BII

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000264896.8SCARB2-2014694478aaENSP00000264896.2
 
Protein coding
CCDS3577Q14108-1 NM_005506.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000452464.6SCARB2-2021495335aaENSP00000399154.2
 
Protein coding
CCDS56335Q14108-2 -GENCODE basicTSL:2
ENST00000640640.1SCARB2-2234608449aaENSP00000492246.1
 
Protein coding
-A0A1W2PQR6 -GENCODE basicTSL:5
ENST00000638295.1SCARB2-2074507320aaENSP00000492288.1
 
Protein coding
-A0A1W2PRF6 -GENCODE basicTSL:5
ENST00000639145.1SCARB2-2154471475aaENSP00000492831.1
 
Protein coding
-A0A1W2PS43 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000638603.1SCARB2-2114284438aaENSP00000491728.1
 
Protein coding
-A0A1W2PPU6 -GENCODE basicTSL:5
ENST00000640957.1SCARB2-2273255470aaENSP00000492004.1
 
Protein coding
-A0A1W2PQB7 -GENCODE basicTSL:5
ENST00000640634.1SCARB2-2221734519aaENSP00000492737.1
 
Protein coding
-A0A1W2PRS1 -TSL:5CDS 5' incomplete
ENST00000639738.1SCARB2-2191517174aaENSP00000491792.1
 
Protein coding
-A0A1W2PQL5 -GENCODE basicTSL:5
ENST00000640880.1SCARB2-22455495aaENSP00000491653.1
 
Protein coding
-A0A1W2PPX6 -TSL:4CDS 5' incomplete
ENST00000639300.1SCARB2-2164554206aaENSP00000492840.1
 
Nonsense mediated decay
-A0A1W2PSE4 -TSL:5
ENST00000639715.1SCARB2-2184355145aaENSP00000491132.1
 
Nonsense mediated decay
-A0A1W2PNX7 -TSL:5CDS 5' incomplete
ENST00000640341.1SCARB2-2213403141aaENSP00000492714.1
 
Nonsense mediated decay
-A0A1W2PS70 -TSL:5
ENST00000638663.1SCARB2-2121922432aaENSP00000491407.1
 
Nonsense mediated decay
-A0A1W2PPX5 -TSL:5
ENST00000509994.2SCARB2-204545106aaENSP00000420988.1
 
Nonsense mediated decay
-D6RDG0 -TSL:4
ENST00000682785.1SCARB2-2283114No protein-
 
Processed transcript
----
ENST00000639324.1SCARB2-217842No protein-
 
Processed transcript
---TSL:5
ENST00000638680.1SCARB2-2135817No protein-
 
Retained intron
---TSL:5
ENST00000638372.1SCARB2-2084811No protein-
 
Retained intron
---TSL:5
ENST00000638567.1SCARB2-2104415No protein-
 
Retained intron
---TSL:2
ENST00000638409.1SCARB2-2092753No protein-
 
Retained intron
---TSL:NA
ENST00000502908.2SCARB2-2032552No protein-
 
Retained intron
---TSL:2
ENST00000640076.1SCARB2-2201991No protein-
 
Retained intron
---TSL:2
ENST00000638843.1SCARB2-2141579No protein-
 
Retained intron
---TSL:5
ENST00000511129.2SCARB2-205860No protein-
 
Retained intron
---TSL:2
ENST00000640916.1SCARB2-226689No protein-
 
Retained intron
---TSL:2
ENST00000638175.1SCARB2-206554No protein-
 
Retained intron
---TSL:5
ENST00000640900.1SCARB2-225531No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 12, Coding exons: 4, Transcript length: 4,355 bps, Translation length: 145 residues

Transcript Support Level (TSL)

TSL:5

Incomplete CDS

CDS 5' incomplete

Version

ENST00000639715.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript-based displays

    HASH(0x3191f488)