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EnsemblEnsembl Home
Description

RB binding protein 8, endonuclease [Source:HGNC Symbol;Acc:HGNC:9891]

Gene Synonyms

COM1, CtIP, RIM, SCKL2

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000327155.10RBBP8-2013275897aaENSP00000323050.5
 
Protein coding
CCDS11875Q99708-1 NM_002894.3MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000399722.6RBBP8-2043293897aaENSP00000382628.2
 
Protein coding
CCDS11875Q99708-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000399725.6RBBP8-2053260867aaENSP00000382630.2
 
Protein coding
CCDS11874Q99708-3 -GENCODE basicTSL:1
ENST00000360790.9RBBP8-2022962902aaENSP00000354024.5
 
Protein coding
-I6L8A6 -GENCODE basicTSL:1
ENST00000399721.6RBBP8-2032229580aaENSP00000382627.2
 
Protein coding
-F6Q6H0 -TSL:1CDS 3' incomplete
ENST00000583057.1RBBP8-2131195324aaENSP00000464691.1
 
Protein coding
-J3QSH7 -TSL:5CDS 5' incomplete
ENST00000582354.5RBBP8-2121019205aaENSP00000463738.1
 
Protein coding
-J3QLW6 -TSL:5CDS 3' incomplete
ENST00000581687.1RBBP8-21061775aaENSP00000463544.1
 
Protein coding
-J3QLH2 -GENCODE basicTSL:2
ENST00000577588.5RBBP8-20757829aaENSP00000464284.1
 
Protein coding
-J3QRM0 -TSL:4CDS 3' incomplete
ENST00000581819.5RBBP8-21157484aaENSP00000463439.1
 
Protein coding
-J3QL93 -TSL:5CDS 3' incomplete
ENST00000583700.5RBBP8-21556410aaENSP00000464628.1
 
Protein coding
-A0A140TA82 -TSL:4CDS 3' incomplete
ENST00000579124.5RBBP8-20854364aaENSP00000462390.1
 
Protein coding
-J3KSA4 -TSL:4CDS 3' incomplete
ENST00000577445.1RBBP8-206480160aaENSP00000463310.1
 
Protein coding
-J3QL00 -TSL:5CDS 5' and 3' incomplete
ENST00000585177.1RBBP8-21660645aaENSP00000477396.1
 
Nonsense mediated decay
-V9GZ40 -TSL:3CDS 5' incomplete
ENST00000583594.4RBBP8-214545No protein-
 
Processed transcript
---TSL:4
ENST00000580892.1RBBP8-209566No protein-
 
Retained intron
---TSL:3
Description

testis expressed 41 [Source:HGNC Symbol;Acc:HGNC:48667]

Gene Synonyms

DKFZp686O1327, LINC00953

Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000653533.1TEX41-3061308No protein-
 
lncRNA
--Ensembl Canonical
ENST00000445791.5TEX41-2074635No protein-
 
lncRNA
--TSL:1
ENST00000665824.1TEX41-3603337No protein-
 
lncRNA
---
ENST00000666826.1TEX41-3642611No protein-
 
lncRNA
--GENCODE basic
ENST00000666917.1TEX41-3662169No protein-
 
lncRNA
---
ENST00000451774.5TEX41-2102098No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000662233.1TEX41-3451971No protein-
 
lncRNA
--GENCODE basic
ENST00000658019.1TEX41-3271901No protein-
 
lncRNA
---
ENST00000654298.1TEX41-3111869No protein-
 
lncRNA
--GENCODE basic
ENST00000670125.1TEX41-3831629No protein-
 
lncRNA
--GENCODE basic
ENST00000671649.1TEX41-3891612No protein-
 
lncRNA
--GENCODE basic
ENST00000663282.1TEX41-3481557No protein-
 
lncRNA
--GENCODE basic
ENST00000657732.1TEX41-3261515No protein-
 
lncRNA
---
ENST00000652981.1TEX41-3041508No protein-
 
lncRNA
--GENCODE basic
ENST00000661398.1TEX41-3411505No protein-
 
lncRNA
--GENCODE basic
ENST00000669646.1TEX41-3791482No protein-
 
lncRNA
---
ENST00000667984.1TEX41-3731476No protein-
 
lncRNA
---
ENST00000660009.1TEX41-3331467No protein-
 
lncRNA
--GENCODE basic
ENST00000655187.1TEX41-3161462No protein-
 
lncRNA
---
ENST00000660169.1TEX41-3341438No protein-
 
lncRNA
--GENCODE basic
ENST00000658898.1TEX41-3291433No protein-
 
lncRNA
--GENCODE basic
ENST00000665081.1TEX41-3571430No protein-
 
lncRNA
--GENCODE basic
ENST00000654442.1TEX41-3141425No protein-
 
lncRNA
--GENCODE basic
ENST00000661697.1TEX41-3431424No protein-
 
lncRNA
---
ENST00000599187.6TEX41-2301423No protein-
 
lncRNA
--TSL:5
ENST00000668319.1TEX41-3751420No protein-
 
lncRNA
---
ENST00000665244.1TEX41-3591415No protein-
 
lncRNA
---
ENST00000666890.1TEX41-3651390No protein-
 
lncRNA
---
ENST00000653941.1TEX41-3091385No protein-
 
lncRNA
---
ENST00000657187.1TEX41-3221368No protein-
 
lncRNA
---
ENST00000653630.1TEX41-3071360No protein-
 
lncRNA
---
ENST00000597655.6TEX41-2241348No protein-
 
lncRNA
--TSL:5
ENST00000653910.1TEX41-3081346No protein-
 
lncRNA
---
ENST00000432608.6TEX41-2061337No protein-
 
lncRNA
--TSL:3
ENST00000657526.1TEX41-3231335No protein-
 
lncRNA
--GENCODE basic
ENST00000665226.1TEX41-3581331No protein-
 
lncRNA
---
ENST00000656881.1TEX41-3201327No protein-
 
lncRNA
---
ENST00000664611.1TEX41-3531316No protein-
 
lncRNA
---
ENST00000666180.1TEX41-3611307No protein-
 
lncRNA
--GENCODE basic
ENST00000664258.1TEX41-3521290No protein-
 
lncRNA
---
ENST00000659777.1TEX41-3311288No protein-
 
lncRNA
---
ENST00000670869.1TEX41-3851273No protein-
 
lncRNA
---
ENST00000666949.1TEX41-3671260No protein-
 
lncRNA
---
ENST00000596747.6TEX41-2201246No protein-
 
lncRNA
--TSL:5
ENST00000666675.1TEX41-3631219No protein-
 
lncRNA
---
ENST00000668187.1TEX41-3741215No protein-
 
lncRNA
---
ENST00000661327.1TEX41-3401214No protein-
 
lncRNA
---
ENST00000671502.1TEX41-3871198No protein-
 
lncRNA
--GENCODE basic
ENST00000666650.1TEX41-3621195No protein-
 
lncRNA
---
ENST00000661482.1TEX41-3421191No protein-
 
lncRNA
--GENCODE basic
ENST00000659773.1TEX41-3301179No protein-
 
lncRNA
---
ENST00000664649.1TEX41-3541175No protein-
 
lncRNA
---
ENST00000661187.1TEX41-3391174No protein-
 
lncRNA
---
ENST00000661920.1TEX41-3441168No protein-
 
lncRNA
---
ENST00000669793.1TEX41-3801162No protein-
 
lncRNA
---
ENST00000627991.3TEX41-2661153No protein-
 
lncRNA
--TSL:5
ENST00000630139.2TEX41-2911146No protein-
 
lncRNA
--TSL:5
ENST00000628136.3TEX41-2681136No protein-
 
lncRNA
--TSL:5
ENST00000597173.5TEX41-2221134No protein-
 
lncRNA
--GENCODE basicTSL:1
ENST00000655563.1TEX41-3171133No protein-
 
lncRNA
---
ENST00000657684.1TEX41-3251124No protein-
 
lncRNA
---
ENST00000629218.2TEX41-2821119No protein-
 
lncRNA
--TSL:5
ENST00000667905.1TEX41-3721119No protein-
 
lncRNA
---
ENST00000661094.1TEX41-3381115No protein-
 
lncRNA
---
ENST00000625362.3TEX41-2441114No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000656353.1TEX41-3191113No protein-
 
lncRNA
---
ENST00000669172.1TEX41-3781111No protein-
 
lncRNA
---
ENST00000668441.1TEX41-3771109No protein-
 
lncRNA
---
ENST00000654410.1TEX41-3131104No protein-
 
lncRNA
---
ENST00000659810.1TEX41-3321086No protein-
 
lncRNA
---
ENST00000631167.3TEX41-3011079No protein-
 
lncRNA
--TSL:5
ENST00000668424.1TEX41-3761076No protein-
 
lncRNA
--GENCODE basic
ENST00000597469.5TEX41-2231073No protein-
 
lncRNA
--TSL:5
ENST00000663303.1TEX41-3491069No protein-
 
lncRNA
---
ENST00000671290.1TEX41-3861060No protein-
 
lncRNA
---
ENST00000667704.1TEX41-3701046No protein-
 
lncRNA
---
ENST00000663323.1TEX41-3501045No protein-
 
lncRNA
---
ENST00000657624.1TEX41-3241045No protein-
 
lncRNA
---
ENST00000631271.3TEX41-3021042No protein-
 
lncRNA
--TSL:5
ENST00000660660.1TEX41-3351024No protein-
 
lncRNA
---
ENST00000629613.3TEX41-2861023No protein-
 
lncRNA
--TSL:5
ENST00000656937.1TEX41-3211017No protein-
 
lncRNA
---
ENST00000653959.1TEX41-3101016No protein-
 
lncRNA
---
ENST00000599072.6TEX41-2291012No protein-
 
lncRNA
--TSL:5
ENST00000628688.2TEX41-2751008No protein-
 
lncRNA
--TSL:5
ENST00000667781.1TEX41-3711000No protein-
 
lncRNA
---
ENST00000600679.5TEX41-233996No protein-
 
lncRNA
--TSL:5
ENST00000628213.2TEX41-271993No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000601578.5TEX41-235987No protein-
 
lncRNA
--TSL:5
ENST00000662271.1TEX41-346987No protein-
 
lncRNA
---
ENST00000626325.3TEX41-252982No protein-
 
lncRNA
--TSL:5
ENST00000670099.1TEX41-382975No protein-
 
lncRNA
---
ENST00000670002.1TEX41-381948No protein-
 
lncRNA
---
ENST00000655165.1TEX41-315948No protein-
 
lncRNA
--GENCODE basic
ENST00000597670.5TEX41-225944No protein-
 
lncRNA
--TSL:5
ENST00000631075.2TEX41-300938No protein-
 
lncRNA
--TSL:5
ENST00000600064.5TEX41-232928No protein-
 
lncRNA
--TSL:5
ENST00000598659.5TEX41-228927No protein-
 
lncRNA
--TSL:5
ENST00000630709.2TEX41-296926No protein-
 
lncRNA
--TSL:5
ENST00000650896.1TEX41-303914No protein-
 
lncRNA
---
ENST00000662863.1TEX41-347914No protein-
 
lncRNA
---
ENST00000626197.2TEX41-250904No protein-
 
lncRNA
--TSL:5
ENST00000602108.5TEX41-237897No protein-
 
lncRNA
--TSL:5
ENST00000671637.1TEX41-388897No protein-
 
lncRNA
---
ENST00000626133.2TEX41-249895No protein-
 
lncRNA
--TSL:5
ENST00000627545.2TEX41-262886No protein-
 
lncRNA
--TSL:5
ENST00000596230.5TEX41-216883No protein-
 
lncRNA
--TSL:5
ENST00000596540.5TEX41-218882No protein-
 
lncRNA
--TSL:5
ENST00000627195.2TEX41-259882No protein-
 
lncRNA
--TSL:5
ENST00000625887.2TEX41-248881No protein-
 
lncRNA
--TSL:5
ENST00000664679.1TEX41-355877No protein-
 
lncRNA
---
ENST00000630651.2TEX41-294874No protein-
 
lncRNA
--TSL:5
ENST00000628775.3TEX41-276874No protein-
 
lncRNA
--TSL:5
ENST00000658352.1TEX41-328866No protein-
 
lncRNA
---
ENST00000664055.1TEX41-351865No protein-
 
lncRNA
---
ENST00000664937.1TEX41-356864No protein-
 
lncRNA
---
ENST00000625651.2TEX41-246841No protein-
 
lncRNA
--TSL:5
ENST00000594471.5TEX41-211840No protein-
 
lncRNA
--TSL:5
ENST00000630959.2TEX41-299838No protein-
 
lncRNA
--TSL:5
ENST00000627757.2TEX41-264837No protein-
 
lncRNA
--TSL:5
ENST00000656317.1TEX41-318825No protein-
 
lncRNA
---
ENST00000629251.2TEX41-283813No protein-
 
lncRNA
--TSL:5
ENST00000630029.2TEX41-289806No protein-
 
lncRNA
--TSL:5
ENST00000660904.1TEX41-337803No protein-
 
lncRNA
---
ENST00000625557.1TEX41-245801No protein-
 
lncRNA
--TSL:5
ENST00000630122.2TEX41-290799No protein-
 
lncRNA
--TSL:5
ENST00000628422.2TEX41-273796No protein-
 
lncRNA
--TSL:5
ENST00000630691.2TEX41-295792No protein-
 
lncRNA
--TSL:5
ENST00000666980.1TEX41-368788No protein-
 
lncRNA
---
ENST00000667423.1TEX41-369777No protein-
 
lncRNA
---
ENST00000660827.1TEX41-336776No protein-
 
lncRNA
---
ENST00000597893.5TEX41-226770No protein-
 
lncRNA
--TSL:5
ENST00000451478.6TEX41-209766No protein-
 
lncRNA
--TSL:2
ENST00000598248.5TEX41-227765No protein-
 
lncRNA
--TSL:5
ENST00000420472.1TEX41-203765No protein-
 
lncRNA
--TSL:3
ENST00000630246.2TEX41-292762No protein-
 
lncRNA
--TSL:5
ENST00000596034.6TEX41-215751No protein-
 
lncRNA
--TSL:5
ENST00000628167.2TEX41-269743No protein-
 
lncRNA
--TSL:5
ENST00000602041.5TEX41-236742No protein-
 
lncRNA
--TSL:5
ENST00000654361.1TEX41-312721No protein-
 
lncRNA
---
ENST00000627675.2TEX41-263719No protein-
 
lncRNA
--TSL:5
ENST00000670681.1TEX41-384719No protein-
 
lncRNA
---
ENST00000604253.5TEX41-238709No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000629460.2TEX41-284707No protein-
 
lncRNA
--TSL:5
ENST00000627785.2TEX41-265704No protein-
 
lncRNA
--TSL:5
ENST00000601277.5TEX41-234700No protein-
 
lncRNA
--TSL:5
ENST00000595686.5TEX41-214693No protein-
 
lncRNA
--TSL:5
ENST00000627051.2TEX41-258691No protein-
 
lncRNA
--TSL:5
ENST00000625671.2TEX41-247690No protein-
 
lncRNA
--TSL:5
ENST00000630451.2TEX41-293690No protein-
 
lncRNA
--TSL:5
ENST00000629997.2TEX41-288689No protein-
 
lncRNA
--TSL:5
ENST00000628985.2TEX41-278688No protein-
 
lncRNA
--TSL:5
ENST00000629585.2TEX41-285680No protein-
 
lncRNA
--TSL:5
ENST00000626952.2TEX41-257679No protein-
 
lncRNA
--TSL:5
ENST00000630724.2TEX41-297677No protein-
 
lncRNA
--TSL:5
ENST00000414195.6TEX41-201674No protein-
 
lncRNA
--TSL:3
ENST00000628237.2TEX41-272672No protein-
 
lncRNA
--TSL:5
ENST00000596278.5TEX41-217669No protein-
 
lncRNA
--TSL:5
ENST00000629194.2TEX41-281661No protein-
 
lncRNA
--TSL:5
ENST00000628794.2TEX41-277654No protein-
 
lncRNA
--TSL:5
ENST00000596970.5TEX41-221646No protein-
 
lncRNA
--TSL:5
ENST00000628057.2TEX41-267645No protein-
 
lncRNA
--TSL:5
ENST00000626239.2TEX41-251640No protein-
 
lncRNA
--TSL:5
ENST00000596589.5TEX41-219636No protein-
 
lncRNA
--TSL:5
ENST00000627419.2TEX41-260631No protein-
 
lncRNA
--TSL:5
ENST00000594626.5TEX41-212627No protein-
 
lncRNA
--TSL:5
ENST00000629631.2TEX41-287613No protein-
 
lncRNA
--TSL:5
ENST00000653186.1TEX41-305613No protein-
 
lncRNA
---
ENST00000626404.1TEX41-255610No protein-
 
lncRNA
--TSL:5
ENST00000629149.1TEX41-279609No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000414256.5TEX41-202604No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000594837.3TEX41-213602No protein-
 
lncRNA
--TSL:5
ENST00000608652.5TEX41-241594No protein-
 
lncRNA
--TSL:5
ENST00000608432.5TEX41-240594No protein-
 
lncRNA
--TSL:5
ENST00000629185.2TEX41-280591No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000627497.2TEX41-261558No protein-
 
lncRNA
--TSL:5
ENST00000609705.5TEX41-242552No protein-
 
lncRNA
--TSL:5
ENST00000451027.5TEX41-208546No protein-
 
lncRNA
--TSL:4
ENST00000605238.3TEX41-239543No protein-
 
lncRNA
--TSL:5
ENST00000431734.5TEX41-205529No protein-
 
lncRNA
--TSL:4
ENST00000628180.2TEX41-270515No protein-
 
lncRNA
--TSL:5
ENST00000423031.1TEX41-204491No protein-
 
lncRNA
--GENCODE basicTSL:4
ENST00000628611.2TEX41-274423No protein-
 
lncRNA
--TSL:5
ENST00000626394.2TEX41-254423No protein-
 
lncRNA
--GENCODE basicTSL:5
ENST00000630732.2TEX41-298380No protein-
 
lncRNA
--TSL:5
ENST00000626411.2TEX41-256368No protein-
 
lncRNA
--TSL:5
ENST00000599358.5TEX41-231366No protein-
 
lncRNA
--TSL:5
ENST00000614173.1TEX41-243190No protein-
 
lncRNA
--TSL:5
ENST00000626363.2TEX41-253144No protein-
 
lncRNA
--TSL:5
Description

lamin A/C [Source:HGNC Symbol;Acc:HGNC:6636]

Gene Synonyms

CMD1A, HGPS, LGMD1B, LMN1, LMNL1, MADA, PRO1

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000368300.9LMNA-2053178664aaENSP00000357283.4
 
Protein coding
CCDS1129P02545-1 NM_170707.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000361308.9LMNA-2012465664aaENSP00000355292.6
 
Protein coding
CCDS1129P02545-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000368301.6LMNA-2062461572aaENSP00000357284.2
 
Protein coding
CCDS1131P02545-2 -GENCODE basicTSL:2
ENST00000675939.1LMNA-2322401664aaENSP00000502256.1
 
Protein coding
CCDS1129P02545-1 -GENCODE basicAPPRIS P1
ENST00000683032.1LMNA-2402329664aaENSP00000506771.1
 
Protein coding
CCDS1129A0A384MQX1 -GENCODE basicAPPRIS P1
ENST00000368299.7LMNA-2042253614aaENSP00000357282.3
 
Protein coding
CCDS72941P02545-6 -GENCODE basicTSL:1
ENST00000677389.1LMNA-2382029572aaENSP00000503633.1
 
Protein coding
CCDS1131P02545-2 NM_005572.4MANE Plus Clinical v0.95GENCODE basic
ENST00000448611.6LMNA-2071943574aaENSP00000395597.2
 
Protein coding
CCDS58038P02545-4 -GENCODE basicTSL:2
ENST00000368297.5LMNA-2021679491aaENSP00000357280.1
 
Protein coding
CCDS72942Q5TCI8 -GENCODE basicTSL:2
ENST00000675667.1LMNA-2292826729aaENSP00000501803.1
 
Protein coding
-A0A6Q8PFJ0 -GENCODE basic
ENST00000676385.2LMNA-2362811634aaENSP00000502091.1
 
Protein coding
-P02545-3 -GENCODE basic
ENST00000682650.1LMNA-2392288634aaENSP00000506904.1
 
Protein coding
---GENCODE basic
ENST00000473598.6LMNA-2122015565aaENSP00000421821.1
 
Protein coding
-P02545-5 -GENCODE basicTSL:2
ENST00000504687.6LMNA-21954643aaENSP00000426535.2
 
Protein coding
-H0YAB0 -TSL:4CDS 3' incomplete
ENST00000675881.1LMNA-2313218342aaENSP00000501670.1
 
Nonsense mediated decay
-A0A6Q8PF80 --
ENST00000676434.1LMNA-2373212342aaENSP00000501648.1
 
Nonsense mediated decay
-A0A6Q8PF80 --
ENST00000684195.1LMNA-2423081540aaENSP00000508220.1
 
Nonsense mediated decay
----
ENST00000674720.1LMNA-2263016516aaENSP00000502798.1
 
Nonsense mediated decay
-A0A6Q8PHQ9 --
ENST00000674600.1LMNA-2252576126aaENSP00000501666.1
 
Nonsense mediated decay
-A0A6Q8PF59 --
ENST00000676208.1LMNA-2342528342aaENSP00000502468.1
 
Nonsense mediated decay
-A0A6Q8PF80 --
ENST00000674518.1LMNA-2242391214aaENSP00000502261.1
 
Nonsense mediated decay
-A0A6Q8PGH0 --
ENST00000675455.1LMNA-228229736aaENSP00000501795.1
 
Nonsense mediated decay
-A0A6Q8PFF5 --
ENST00000675874.1LMNA-2302239123aaENSP00000501851.1
 
Nonsense mediated decay
-A0A6Q8PFM1 --
ENST00000515459.5LMNA-22175738aaENSP00000424518.1
 
Nonsense mediated decay
-D6RB20 -TSL:5
ENST00000469565.6LMNA-209591No protein-
 
Processed transcript
---TSL:4
ENST00000502751.5LMNA-218570No protein-
 
Processed transcript
---TSL:4
ENST00000515711.1LMNA-222569No protein-
 
Processed transcript
---TSL:5
ENST00000470199.2LMNA-210551No protein-
 
Processed transcript
---TSL:4
ENST00000502357.5LMNA-217537No protein-
 
Processed transcript
---TSL:4
ENST00000470835.1LMNA-211472No protein-
 
Processed transcript
---TSL:3
ENST00000495341.5LMNA-214394No protein-
 
Processed transcript
---TSL:5
ENST00000683773.1LMNA-241288No protein-
 
Processed transcript
----
ENST00000478063.2LMNA-213285No protein-
 
Processed transcript
---TSL:5
ENST00000675989.1LMNA-2333616No protein-
 
Retained intron
----
ENST00000676283.1LMNA-2353342No protein-
 
Retained intron
----
ENST00000496738.6LMNA-2152987No protein-
 
Retained intron
---TSL:2
ENST00000675431.1LMNA-2271514No protein-
 
Retained intron
----
ENST00000368298.2LMNA-2031475No protein-
 
Retained intron
---TSL:1
ENST00000498722.3LMNA-2161031No protein-
 
Retained intron
---TSL:2
ENST00000459904.2LMNA-208919No protein-
 
Retained intron
---TSL:2
ENST00000506981.1LMNA-220576No protein-
 
Retained intron
---TSL:2
ENST00000515824.1LMNA-223393No protein-
 
Retained intron
---TSL:2
Description

pogo transposable element derived with KRAB domain [Source:HGNC Symbol;Acc:HGNC:18800]

Gene Synonyms

BASS2, KIAA15131, KRBOX2, LST003

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000367876.9POGK-2025751609aaENSP00000356850.4
 
Protein coding
CCDS1254A0A024R8Y1 Q9P215 NM_017542.5MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000367875.1POGK-2016254609aaENSP00000356849.1
 
Protein coding
CCDS1254A0A024R8Y1 Q9P215 -GENCODE basicAPPRIS P1TSL:5
ENST00000449930.5POGK-203954209aaENSP00000404402.1
 
Protein coding
-Q5TIJ2 -TSL:2CDS 3' incomplete
Description

serine/arginine repetitive matrix 1 [Source:MGI Symbol;Acc:MGI:1858303]

Gene Synonyms

SRm160

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000084846.12Srrm1-2023740918aaENSMUSP00000081906.6
 
Protein coding
CCDS51329A2A8V9 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000136342.9Srrm1-2083152923aaENSMUSP00000125003.2
 
Protein coding
CCDS38919E9PUK6 GENCODE basicAPPRIS P3TSL:5
ENSMUST00000105861.8Srrm1-2033797909aaENSMUSP00000101487.2
 
Protein coding
-A2A8V8 GENCODE basicAPPRIS ALT2TSL:5
ENSMUST00000030613.11Srrm1-2012940897aaENSMUSP00000030613.4
 
Protein coding
-E9QKA4 GENCODE basicAPPRIS ALT2TSL:1
ENSMUST00000140050.3Srrm1-211952318aaENSMUSP00000120952.2
 
Protein coding
-F6UK16 TSL:5CDS 5' and 3' incomplete
ENSMUST00000131373.8Srrm1-205619198aaENSMUSP00000122754.2
 
Protein coding
-A2A983 TSL:3CDS 3' incomplete
ENSMUST00000131301.2Srrm1-204796239aaENSMUSP00000125477.2
 
Nonsense mediated decay
-F7BWM1 TSL:5CDS 5' incomplete
ENSMUST00000136409.2Srrm1-209637140aaENSMUSP00000124450.2
 
Nonsense mediated decay
-F6T4M4 TSL:3CDS 5' incomplete
ENSMUST00000134019.2Srrm1-2061073No protein-
 
Processed transcript
--TSL:2
ENSMUST00000150619.9Srrm1-2124542No protein-
 
Retained intron
--TSL:2
ENSMUST00000134854.8Srrm1-2072847No protein-
 
Retained intron
--TSL:2
ENSMUST00000154788.2Srrm1-214776No protein-
 
Retained intron
--TSL:3
ENSMUST00000151251.2Srrm1-213681No protein-
 
Retained intron
--TSL:2
ENSMUST00000162914.2Srrm1-215512No protein-
 
Retained intron
--TSL:3
ENSMUST00000136570.2Srrm1-210373No protein-
 
Retained intron
--TSL:2
Description

DCC netrin 1 receptor [Source:HGNC Symbol;Acc:HGNC:2701]

Gene Synonyms

IGDCC1, NTN1R1

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000442544.7DCC-203101811447aaENSP00000389140.2
 
Protein coding
CCDS11952P43146 NM_005215.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000412726.5DCC-20295251424aaENSP00000397322.2
 
Protein coding
-E7EQM8 -GENCODE basicTSL:1
ENST00000581580.5DCC-21535171076aaENSP00000464582.1
 
Protein coding
-J3QS93 -GENCODE basicTSL:1
ENST00000579941.1DCC-211750208aaENSP00000464292.1
 
Protein coding
-J3QRM6 -TSL:5CDS 5' incomplete
ENST00000578080.1DCC-205621181aaENSP00000463699.1
 
Protein coding
-J3QLT8 -TSL:3CDS 5' incomplete
ENST00000582875.1DCC-21747088aaENSP00000463131.1
 
Protein coding
-J3QKL2 -TSL:2CDS 5' incomplete
ENST00000578949.1DCC-206444102aaENSP00000463766.1
 
Protein coding
-J3QQJ6 -TSL:3CDS 3' incomplete
ENST00000304775.12DCC-2013132772aaENSP00000304146.8
 
Nonsense mediated decay
-H0Y2Q5 -TSL:1CDS 5' incomplete
ENST00000579349.1DCC-20757674aaENSP00000464277.1
 
Nonsense mediated decay
-J3QRL3 -TSL:4CDS 5' incomplete
ENST00000581559.1DCC-21454670aaENSP00000463463.1
 
Nonsense mediated decay
-J3QLB0 -TSL:4CDS 5' incomplete
ENST00000580146.1DCC-213564No protein-
 
Processed transcript
---TSL:4
ENST00000580024.1DCC-212549No protein-
 
Processed transcript
---TSL:4
ENST00000579666.1DCC-208518No protein-
 
Processed transcript
---TSL:2
ENST00000584710.5DCC-218374No protein-
 
Processed transcript
---TSL:2
ENST00000582595.1DCC-216322No protein-
 
Processed transcript
---TSL:2
ENST00000577224.1DCC-204155No protein-
 
Processed transcript
---TSL:NA
ENST00000579702.1DCC-209528No protein-
 
Retained intron
---TSL:3
ENST00000579883.1DCC-210505No protein-
 
Retained intron
---TSL:4
Description

scavenger receptor class B member 2 [Source:HGNC Symbol;Acc:HGNC:1665]

Gene Synonyms

CD36L2, HLGP85, LIMP-2, LIMPII, SR-BII

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000264896.8SCARB2-2014694478aaENSP00000264896.2
 
Protein coding
CCDS3577Q14108-1 NM_005506.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000452464.6SCARB2-2021495335aaENSP00000399154.2
 
Protein coding
CCDS56335Q14108-2 -GENCODE basicTSL:2
ENST00000640640.1SCARB2-2234608449aaENSP00000492246.1
 
Protein coding
-A0A1W2PQR6 -GENCODE basicTSL:5
ENST00000638295.1SCARB2-2074507320aaENSP00000492288.1
 
Protein coding
-A0A1W2PRF6 -GENCODE basicTSL:5
ENST00000639145.1SCARB2-2154471475aaENSP00000492831.1
 
Protein coding
-A0A1W2PS43 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000638603.1SCARB2-2114284438aaENSP00000491728.1
 
Protein coding
-A0A1W2PPU6 -GENCODE basicTSL:5
ENST00000640957.1SCARB2-2273255470aaENSP00000492004.1
 
Protein coding
-A0A1W2PQB7 -GENCODE basicTSL:5
ENST00000640634.1SCARB2-2221734519aaENSP00000492737.1
 
Protein coding
-A0A1W2PRS1 -TSL:5CDS 5' incomplete
ENST00000639738.1SCARB2-2191517174aaENSP00000491792.1
 
Protein coding
-A0A1W2PQL5 -GENCODE basicTSL:5
ENST00000640880.1SCARB2-22455495aaENSP00000491653.1
 
Protein coding
-A0A1W2PPX6 -TSL:4CDS 5' incomplete
ENST00000639300.1SCARB2-2164554206aaENSP00000492840.1
 
Nonsense mediated decay
-A0A1W2PSE4 -TSL:5
ENST00000639715.1SCARB2-2184355145aaENSP00000491132.1
 
Nonsense mediated decay
-A0A1W2PNX7 -TSL:5CDS 5' incomplete
ENST00000640341.1SCARB2-2213403141aaENSP00000492714.1
 
Nonsense mediated decay
-A0A1W2PS70 -TSL:5
ENST00000638663.1SCARB2-2121922432aaENSP00000491407.1
 
Nonsense mediated decay
-A0A1W2PPX5 -TSL:5
ENST00000509994.2SCARB2-204545106aaENSP00000420988.1
 
Nonsense mediated decay
-D6RDG0 -TSL:4
ENST00000682785.1SCARB2-2283114No protein-
 
Processed transcript
----
ENST00000639324.1SCARB2-217842No protein-
 
Processed transcript
---TSL:5
ENST00000638680.1SCARB2-2135817No protein-
 
Retained intron
---TSL:5
ENST00000638372.1SCARB2-2084811No protein-
 
Retained intron
---TSL:5
ENST00000638567.1SCARB2-2104415No protein-
 
Retained intron
---TSL:2
ENST00000638409.1SCARB2-2092753No protein-
 
Retained intron
---TSL:NA
ENST00000502908.2SCARB2-2032552No protein-
 
Retained intron
---TSL:2
ENST00000640076.1SCARB2-2201991No protein-
 
Retained intron
---TSL:2
ENST00000638843.1SCARB2-2141579No protein-
 
Retained intron
---TSL:5
ENST00000511129.2SCARB2-205860No protein-
 
Retained intron
---TSL:2
ENST00000640916.1SCARB2-226689No protein-
 
Retained intron
---TSL:2
ENST00000638175.1SCARB2-206554No protein-
 
Retained intron
---TSL:5
ENST00000640900.1SCARB2-225531No protein-
 
Retained intron
---TSL:2
Statistics

Exons: 11, Coding exons: 11, Transcript length: 4,284 bps, Translation length: 438 residues

Transcript Support Level (TSL)

TSL:5

Version

ENST00000638603.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x3140f978)