Human (GRCh38.p14)
Description

nucleoporin 54 [Source:HGNC Symbol;Acc:HGNC:17359]

Location
About this transcript

This transcript has 13 exons, is annotated with 6 domains and features, is associated with 15533 variant alleles and maps to 549 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000264883.8NUP54-2012249507aaENSP00000264883.3
 
Protein coding
CCDS3576Q7Z3B4-1 NM_017426.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000695547.1NUP54-2194320561aaENSP00000512004.1
 
Protein coding
A0A8Q3WKJ4 -GENCODE basic
ENST00000695552.2NUP54-2244226289aaENSP00000512010.2
 
Protein coding
A0A8Z5F6C8 -GENCODE basic
ENST00000515460.6NUP54-2172413327aaENSP00000512009.1
 
Protein coding
A0A8Q3WLP2 -GENCODE basicTSL:3
ENST00000514987.6NUP54-2161949459aaENSP00000421304.1
 
Protein coding
CCDS63998Q7Z3B4-3 -GENCODE basicTSL:2
ENST00000508465.6NUP54-2061809438aaENSP00000512008.1
 
Protein coding
A0A8Q3WKK2 -GENCODE basicTSL:3
ENST00000695546.1NUP54-2186815138aaENSP00000512003.1
 
Nonsense mediated decay
D6RFI8 --
ENST00000695553.2NUP54-225255283aaENSP00000512011.1
 
Nonsense mediated decay
A0A8Q3WKL3 --
ENST00000695549.1NUP54-2212411380aaENSP00000512005.1
 
Nonsense mediated decay
A0A8Q3WL42 --
ENST00000695556.1NUP54-2282156303aaENSP00000512014.1
 
Nonsense mediated decay
A0A8Q3SHX2 --
ENST00000695551.1NUP54-2232151243aaENSP00000512007.1
 
Nonsense mediated decay
A0A8Q3WKP8 --
ENST00000507257.6NUP54-2052002102aaENSP00000425243.1
 
Nonsense mediated decay
D6RBF7 -TSL:5
ENST00000695550.2NUP54-2221943102aaENSP00000512006.2
 
Nonsense mediated decay
D6RBF7 --
ENST00000695554.1NUP54-2261917253aaENSP00000512012.1
 
Nonsense mediated decay
A0A8Q3WLY5 --
ENST00000502850.5NUP54-2021604138aaENSP00000426609.1
 
Nonsense mediated decay
D6RFI8 -TSL:1
ENST00000695555.2NUP54-227146884aaENSP00000512013.1
 
Nonsense mediated decay
A0A8Q3SI16 --
ENST00000512151.5NUP54-2111385102aaENSP00000424172.1
 
Nonsense mediated decay
D6RBF7 -TSL:2
ENST00000513352.1NUP54-21357984aaENSP00000424389.1
 
Nonsense mediated decay
D6RB65 -TSL:4
ENST00000695557.2NUP54-2292272No protein-
 
Protein coding CDS not defined
---
ENST00000695548.1NUP54-2202234No protein-
 
Protein coding CDS not defined
---
ENST00000508583.6NUP54-207633No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000514307.5NUP54-214566No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000506098.5NUP54-204548No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000510884.5NUP54-210441No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000514313.2NUP54-2154547No protein-
 
Retained intron
--TSL:2
ENST00000510569.6NUP54-2092754No protein-
 
Retained intron
--TSL:5
ENST00000508604.5NUP54-2081671No protein-
 
Retained intron
--TSL:2
ENST00000513248.1NUP54-212531No protein-
 
Retained intron
--TSL:2
ENST00000504173.1NUP54-203314No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 13, Coding exons: 8, Transcript length: 2,413 bps, Translation length: 327 residues

Transcript Support Level (TSL)

TSL:3

Version

ENST00000515460.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.