Human (GRCh38.p14)
Description

signaling receptor and transporter of retinol STRA6 [Source:HGNC Symbol;Acc:HGNC:30650]

Gene Synonyms

FLJ12541

Location
About this transcript

This transcript has 19 exons, is annotated with 20 domains and features, is associated with 10678 variant alleles and maps to 585 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000395105.9STRA6-2022708667aaENSP00000378537.4
 
Protein coding
CCDS10261Q9BX79-1 NM_022369.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000323940.9STRA6-2012864667aaENSP00000326085.5
 
Protein coding
CCDS10261Q9BX79-1 -GENCODE basicAPPRIS P1TSL:2
ENST00000616000.4STRA6-2222843667aaENSP00000479112.1
 
Protein coding
CCDS10261Q9BX79-1 -GENCODE basicAPPRIS P1TSL:2
ENST00000423167.6STRA6-2042776658aaENSP00000413012.2
 
Protein coding
CCDS45301Q9BX79-3 -GENCODE basicTSL:1
ENST00000416286.7STRA6-2032750659aaENSP00000400403.3
 
Protein coding
J3KQI6 -GENCODE basicTSL:5
ENST00000449139.6STRA6-2062732667aaENSP00000410221.2
 
Protein coding
CCDS10261Q9BX79-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000535552.5STRA6-2072631704aaENSP00000440238.1
 
Protein coding
CCDS55974Q9BX79-5 -GENCODE basicTSL:2
ENST00000563965.5STRA6-2092565706aaENSP00000456609.1
 
Protein coding
CCDS55973Q9BX79-4 -GENCODE basicTSL:1
ENST00000574278.5STRA6-2182455682aaENSP00000458827.1
 
Protein coding
CCDS58387Q9BX79-6 -GENCODE basicTSL:2
ENST00000432245.6STRA6-2051889159aaENSP00000407176.2
 
Protein coding
CCDS45302Q9BX79-2 -GENCODE basicTSL:1
ENST00000572785.1STRA6-212797266aaENSP00000459546.1
 
Protein coding
I3L2B6 -TSL:3CDS 5' and 3' incomplete
ENST00000571341.1STRA6-21144988aaENSP00000458204.1
 
Protein coding
I3L0M6 -TSL:4CDS 3' incomplete
ENST00000569936.5STRA6-2102151477aaENSP00000461799.1
 
Nonsense mediated decay
I3NI08 -TSL:1
ENST00000573391.1STRA6-21556687aaENSP00000458734.1
 
Nonsense mediated decay
I3L1C7 -TSL:4
ENST00000574439.5STRA6-2192887No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000573456.5STRA6-216760No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000574570.1STRA6-220569No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000545137.5STRA6-2082324No protein-
 
Retained intron
--TSL:2
ENST00000572975.1STRA6-213795No protein-
 
Retained intron
--TSL:5
ENST00000573724.1STRA6-217596No protein-
 
Retained intron
--TSL:3
ENST00000573214.5STRA6-214577No protein-
 
Retained intron
--TSL:3
ENST00000575272.1STRA6-221572No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 19, Coding exons: 18, Transcript length: 2,708 bps, Translation length: 667 residues

MANE

This MANE Select transcript contains ENSP00000378537 and matches to NM_022369.4 and NP_071764.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BX79

CCDS

This transcript is a member of the Human CCDS set: CCDS10261

Transcript Support Level (TSL)

TSL:1

Version

ENST00000395105.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.