Human (GRCh38.p14)
Description

sodium voltage-gated channel alpha subunit 2 [Source:HGNC Symbol;Acc:HGNC:10588]

Gene Synonyms

HBSCI, HBSCII, NAV1.2, SCN2A1, SCN2A2

About this transcript

This transcript has 27 exons, is annotated with 76 domains and features, is associated with 62250 variant alleles and maps to 868 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000375437.7SCN2A-20287762005aaENSP00000364586.2
 
Protein coding
CCDS33314Q99250-1 NM_001040142.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENST00000636071.2SCN2A-20888812005aaENSP00000490107.1
 
Protein coding
CCDS33313Q99250-2 -GENCODE basicTSL:5
ENST00000636985.2SCN2A-21388561873aaENSP00000490849.1
 
Protein coding
A0A1B0GWA6 -GENCODE basicTSL:5
ENST00000631182.3SCN2A-20687762005aaENSP00000486885.1
 
Protein coding
CCDS33313Q99250-2 NM_001371246.1MANE Plus ClinicalGENCODE basicTSL:5
ENST00000283256.10SCN2A-20186602005aaENSP00000283256.6
 
Protein coding
CCDS33314Q99250-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000637266.2SCN2A-21486102005aaENSP00000490866.1
 
Protein coding
CCDS33314Q99250-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000424833.5SCN2A-2031807505aaENSP00000406454.2
 
Protein coding
F6U291 -TSL:1CDS 3' incomplete
ENST00000486878.2SCN2A-205661178aaENSP00000487466.1
 
Protein coding
A0A0D9SGG2 -TSL:5CDS 5' incomplete
ENST00000636662.2SCN2A-211945692aaENSP00000489873.1
 
Nonsense mediated decay
A0A1B0GTX0 -TSL:5
ENST00000636384.2SCN2A-2109007731aaENSP00000490765.1
 
Nonsense mediated decay
A0A1B0GW40 -TSL:5
ENST00000636769.1SCN2A-2128573730aaENSP00000490800.1
 
Nonsense mediated decay
A0A1B0GW67 -TSL:5
ENST00000636135.1SCN2A-2098519558aaENSP00000489821.1
 
Nonsense mediated decay
A0A1B0GTS6 -TSL:5
ENST00000637367.1SCN2A-215440892aaENSP00000490592.1
 
Nonsense mediated decay
A0A1B0GTX0 -TSL:5
ENST00000674133.1SCN2A-2201455418aaENSP00000500975.1
 
Nonsense mediated decay
A0A669KAR0 -CDS 5' incomplete
ENST00000673831.1SCN2A-2181145130aaENSP00000501305.1
 
Nonsense mediated decay
A0A669KBL5 -CDS 5' incomplete
ENST00000673883.1SCN2A-219964140aaENSP00000501309.1
 
Nonsense mediated decay
A0A669KBM3 -CDS 5' incomplete
ENST00000640791.1SCN2A-2178169No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000635945.1SCN2A-2073119No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000638151.1SCN2A-2162832No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000480032.4SCN2A-20411676No protein-
 
Retained intron
--TSL:1
Statistics

Exons: 27, Coding exons: 26, Transcript length: 8,776 bps, Translation length: 2,005 residues

MANE

This MANE Select transcript contains ENSP00000364586 and matches to NM_001040142.2 and NP_001035232.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99250

CCDS

This transcript is a member of the Human CCDS set: CCDS33314

Transcript Support Level (TSL)

TSL:5

Version

ENST00000375437.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.