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EnsemblEnsembl Home
Description

novel transcript

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
ENST00000509201.1-466No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basicTSL:3
Description

wingless-type MMTV integration site family, member 7A [Source:MGI Symbol;Acc:MGI:98961]

Gene Synonyms

Wnt-7a, tw

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
ENSMUST00000032180.7Wnt7a-2013172349aaENSMUSP00000032180.7
 
Protein coding
CCDS39568P24383 GENCODE basicAPPRIS P1TSL:1
ENSMUST00000132936.3Wnt7a-202297No protein-
 
Processed transcript
--TSL:5
ENSMUST00000133092.3Wnt7a-203293No protein-
 
Processed transcript
--TSL:3
Description

SPG7 matrix AAA peptidase subunit, paraplegin [Source:HGNC Symbol;Acc:HGNC:11237]

Gene Synonyms

CAR, CMAR, SPG5C

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000645818.2SPG7-2683076795aaENSP00000495795.2
 
Protein coding
CCDS10977Q9UQ90-1 NM_003119.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P2
ENST00000341316.6SPG7-2022288489aaENSP00000341157.2
 
Protein coding
CCDS10978Q9UQ90-2 -GENCODE basicTSL:1
ENST00000647079.1SPG7-2903330659aaENSP00000495967.1
 
Protein coding
-A0A2R8Y726 -GENCODE basic
ENST00000645063.1SPG7-2623266809aaENSP00000493590.1
 
Protein coding
-A0A2R8Y3M4 -GENCODE basic
ENST00000646303.1SPG7-2773099751aaENSP00000494160.1
 
Protein coding
-A0A2R8Y4Y7 -GENCODE basic
ENST00000268704.7SPG7-2013026788aaENSP00000268704.3
 
Protein coding
-A0A2U3TZH1 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000644781.1SPG7-2583012780aaENSP00000495473.1
 
Protein coding
-A0A2R8YFW4 -GENCODE basic
ENST00000644671.1SPG7-2552689681aaENSP00000495999.1
 
Protein coding
-A0A2R8Y7B8 -CDS 5' incomplete
ENST00000647032.1SPG7-2892644617aaENSP00000496047.1
 
Protein coding
-A0A2R8Y7E2 -CDS 5' incomplete
ENST00000645897.1SPG7-2712593641aaENSP00000495293.1
 
Protein coding
-A0A2R8Y6K2 -GENCODE basic
ENST00000643649.1SPG7-2402507758aaENSP00000494806.1
 
Protein coding
-A0A2R8YDQ1 -GENCODE basic
ENST00000646716.1SPG7-2852264493aaENSP00000495593.1
 
Protein coding
-A0A2R8YEH4 -GENCODE basic
ENST00000646445.1SPG7-2791890415aaENSP00000496434.1
 
Protein coding
-A0A2R8YGZ0 -CDS 5' incomplete
ENST00000643307.1SPG7-2341794507aaENSP00000495673.1
 
Protein coding
-A0A2R8Y729 -GENCODE basic
ENST00000567138.3SPG7-2161376114aaENSP00000483351.2
 
Protein coding
-A0A087X0F5 -TSL:2CDS 5' incomplete
ENST00000565891.2SPG7-21280781aaENSP00000495004.1
 
Protein coding
-A0A2R8YDW8 -TSL:2CDS 5' incomplete
ENST00000566371.6SPG7-214740238aaENSP00000454475.2
 
Protein coding
-H3BMP1 -TSL:3CDS 3' incomplete
ENST00000646263.1SPG7-2763401489aaENSP00000494119.1
 
Nonsense mediated decay
CCDS10978Q9UQ90-2 --
ENST00000646930.1SPG7-2874321463aaENSP00000495219.1
 
Nonsense mediated decay
-A0A2R8Y632 --
ENST00000644901.1SPG7-2594288278aaENSP00000493797.1
 
Nonsense mediated decay
-A0A2R8Y4L0 --
ENST00000644498.1SPG7-2534255456aaENSP00000496244.1
 
Nonsense mediated decay
-A0A2R8Y7N2 --
ENST00000642334.1SPG7-2264100421aaENSP00000496403.1
 
Nonsense mediated decay
-A0A2R8YFF4 -CDS 5' incomplete
ENST00000643954.1SPG7-2443938383aaENSP00000493826.1
 
Nonsense mediated decay
-A0A2R8Y4M0 -CDS 5' incomplete
ENST00000643668.1SPG7-2413851164aaENSP00000494903.1
 
Nonsense mediated decay
-A0A2R8YDU1 --
ENST00000646399.1SPG7-2783776358aaENSP00000495734.1
 
Nonsense mediated decay
-A0A2R8YG79 -CDS 5' incomplete
ENST00000643105.1SPG7-2323748485aaENSP00000495260.1
 
Nonsense mediated decay
-A0A2R8Y6E8 -CDS 5' incomplete
ENST00000645042.1SPG7-2613367511aaENSP00000493908.1
 
Nonsense mediated decay
-A0A2R8YFJ7 --
ENST00000569820.6SPG7-222331370aaENSP00000454805.1
 
Nonsense mediated decay
-H3BNE4 -TSL:5CDS 5' incomplete
ENST00000646826.1SPG7-2863249511aaENSP00000495123.1
 
Nonsense mediated decay
-A0A2R8YFJ7 --
ENST00000646531.1SPG7-2813216511aaENSP00000495185.1
 
Nonsense mediated decay
-A0A2R8YFJ7 --
ENST00000645354.1SPG7-2642922250aaENSP00000494158.1
 
Nonsense mediated decay
-A0A2R8Y4L7 -CDS 5' incomplete
ENST00000643724.1SPG7-2422882258aaENSP00000496335.1
 
Nonsense mediated decay
-A0A2R8YGV4 --
ENST00000644210.1SPG7-2492817511aaENSP00000495675.1
 
Nonsense mediated decay
-A0A2R8YFJ7 --
ENST00000647227.1SPG7-292267027aaENSP00000495783.1
 
Nonsense mediated decay
-A0A2R8YG90 -CDS 5' incomplete
ENST00000643345.1SPG7-2352665126aaENSP00000493982.1
 
Nonsense mediated decay
-A0A2R8YCU3 --
ENST00000646589.1SPG7-2832565128aaENSP00000494739.1
 
Nonsense mediated decay
-A0A2R8YDM8 --
ENST00000645886.1SPG7-2702537206aaENSP00000494111.1
 
Nonsense mediated decay
-A0A2R8Y4Z7 -CDS 5' incomplete
ENST00000644751.1SPG7-2572233320aaENSP00000493934.1
 
Nonsense mediated decay
-A0A2R8Y4M8 -CDS 5' incomplete
ENST00000566682.2SPG7-2151321357aaENSP00000461979.2
 
Nonsense mediated decay
-J3KRF6 -TSL:3CDS 5' incomplete
ENST00000564409.2SPG7-2101314181aaENSP00000495297.1
 
Nonsense mediated decay
-A0A2R8YFN9 -TSL:3CDS 5' incomplete
ENST00000642371.1SPG7-2271289208aaENSP00000495352.1
 
Nonsense mediated decay
-A0A2R8YFQ9 -CDS 5' incomplete
ENST00000645533.1SPG7-2661225339aaENSP00000495690.1
 
Nonsense mediated decay
-A0A2R8Y6Z7 --
ENST00000561911.5SPG7-2041025210aaENSP00000457387.1
 
Nonsense mediated decay
-H3BTY6 -TSL:5CDS 5' incomplete
ENST00000645258.1SPG7-263986107aaENSP00000496510.1
 
Nonsense mediated decay
-A0A2R8Y856 -CDS 5' incomplete
ENST00000643957.1SPG7-245936107aaENSP00000494246.1
 
Nonsense mediated decay
-A0A2R8Y530 -CDS 5' incomplete
ENST00000566221.5SPG7-213734106aaENSP00000457298.1
 
Nonsense mediated decay
-H3BTR8 -TSL:3CDS 5' incomplete
ENST00000643370.1SPG7-237726162aaENSP00000494895.1
 
Nonsense mediated decay
-A0A2R8Y617 -CDS 5' incomplete
ENST00000644044.1SPG7-24651656aaENSP00000494000.1
 
Nonsense mediated decay
-A0A2R8YDS3 -CDS 5' incomplete
ENST00000611189.2SPG7-2235423No protein-
 
Processed transcript
---TSL:NA
ENST00000643496.1SPG7-2392859No protein-
 
Processed transcript
----
ENST00000645842.1SPG7-2692742No protein-
 
Processed transcript
----
ENST00000643350.1SPG7-2362475No protein-
 
Processed transcript
----
ENST00000645742.1SPG7-2671677No protein-
 
Processed transcript
----
ENST00000568509.3SPG7-2191632No protein-
 
Processed transcript
---TSL:2
ENST00000563783.6SPG7-208931No protein-
 
Processed transcript
---TSL:3
ENST00000646707.1SPG7-284919No protein-
 
Processed transcript
----
ENST00000647239.1SPG7-293821No protein-
 
Processed transcript
----
ENST00000565370.1SPG7-211686No protein-
 
Processed transcript
---TSL:3
ENST00000643178.1SPG7-233669No protein-
 
Processed transcript
----
ENST00000569363.2SPG7-220617No protein-
 
Processed transcript
---TSL:2
ENST00000568151.1SPG7-217544No protein-
 
Processed transcript
---TSL:4
ENST00000642436.1SPG7-229422No protein-
 
Processed transcript
----
ENST00000644556.1SPG7-254323No protein-
 
Processed transcript
----
ENST00000644748.1SPG7-2566369No protein-
 
Retained intron
----
ENST00000643734.1SPG7-2434754No protein-
 
Retained intron
----
ENST00000644225.1SPG7-2504581No protein-
 
Retained intron
----
ENST00000647476.1SPG7-2954252No protein-
 
Retained intron
----
ENST00000645977.1SPG7-2744168No protein-
 
Retained intron
----
ENST00000644171.1SPG7-2483802No protein-
 
Retained intron
----
ENST00000561702.6SPG7-2033729No protein-
 
Retained intron
---TSL:2
ENST00000644281.1SPG7-2513728No protein-
 
Retained intron
----
ENST00000647302.1SPG7-2943692No protein-
 
Retained intron
----
ENST00000643409.1SPG7-2383475No protein-
 
Retained intron
----
ENST00000645392.1SPG7-2653384No protein-
 
Retained intron
----
ENST00000644464.1SPG7-2523119No protein-
 
Retained intron
----
ENST00000642226.1SPG7-2243110No protein-
 
Retained intron
----
ENST00000647123.1SPG7-2912991No protein-
 
Retained intron
----
ENST00000644930.1SPG7-2602969No protein-
 
Retained intron
----
ENST00000646958.1SPG7-2882931No protein-
 
Retained intron
----
ENST00000564047.2SPG7-2092893No protein-
 
Retained intron
---TSL:2
ENST00000646005.1SPG7-2752796No protein-
 
Retained intron
----
ENST00000647491.1SPG7-2962788No protein-
 
Retained intron
----
ENST00000642984.1SPG7-2312765No protein-
 
Retained intron
----
ENST00000645952.1SPG7-2732668No protein-
 
Retained intron
----
ENST00000646543.1SPG7-2822626No protein-
 
Retained intron
----
ENST00000645944.1SPG7-2722249No protein-
 
Retained intron
----
ENST00000642814.1SPG7-2302245No protein-
 
Retained intron
----
ENST00000562775.2SPG7-2061534No protein-
 
Retained intron
---TSL:1
ENST00000569720.2SPG7-2211403No protein-
 
Retained intron
---TSL:2
ENST00000642427.1SPG7-2281317No protein-
 
Retained intron
----
ENST00000642263.1SPG7-2251178No protein-
 
Retained intron
----
ENST00000646454.1SPG7-2801060No protein-
 
Retained intron
----
ENST00000563218.6SPG7-207976No protein-
 
Retained intron
---TSL:5
ENST00000561945.2SPG7-205803No protein-
 
Retained intron
---TSL:3
ENST00000644061.1SPG7-247526No protein-
 
Retained intron
----
ENST00000568205.1SPG7-218463No protein-
 
Retained intron
---TSL:2
Description

ribonuclease H2 subunit B [Source:HGNC Symbol;Acc:HGNC:25671]

Gene Synonyms

AGS2, DLEU8, FLJ11712

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000336617.8RNASEH2B-2011513312aaENSP00000337623.2
 
Protein coding
CCDS9425Q5TBB1-1 NM_024570.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
ENST00000422660.6RNASEH2B-2024885257aaENSP00000389877.1
 
Protein coding
CCDS45047Q5TBB1-2 -GENCODE basicTSL:5
ENST00000646709.1RNASEH2B-2424003282aaENSP00000495278.1
 
Protein coding
-A0A087WXR7 -GENCODE basic
ENST00000616907.2RNASEH2B-2083410289aaENSP00000482701.2
 
Protein coding
-A0A087WZJ6 -GENCODE basicTSL:3
ENST00000643159.1RNASEH2B-2162155324aaENSP00000495587.1
 
Protein coding
-A0A2R8YEH2 -GENCODE basic
ENST00000643774.1RNASEH2B-2221837300aaENSP00000495482.1
 
Protein coding
-A0A2R8Y6Q6 -GENCODE basic
ENST00000645955.1RNASEH2B-2371829289aaENSP00000495755.1
 
Protein coding
-A0A2R8Y761 -GENCODE basic
ENST00000646960.1RNASEH2B-2441711355aaENSP00000496481.1
 
Protein coding
-A0A2R8Y7R8 -GENCODE basic
ENST00000645618.1RNASEH2B-2341700263aaENSP00000495429.1
 
Protein coding
-A0A2R8Y6M7 -GENCODE basic
ENST00000646731.1RNASEH2B-2431567254aaENSP00000493828.1
 
Protein coding
-A0A2R8YCP1 -GENCODE basic
ENST00000645188.1RNASEH2B-2291525309aaENSP00000496224.1
 
Protein coding
-A0A2R8YGP2 -GENCODE basicAPPRIS ALT1
ENST00000642454.1RNASEH2B-2131407227aaENSP00000494221.1
 
Protein coding
-A0A2R8YEC1 -GENCODE basic
ENST00000643682.1RNASEH2B-2211366293aaENSP00000493655.1
 
Protein coding
-A0A2R8YCJ4 -GENCODE basic
ENST00000645990.1RNASEH2B-2381323266aaENSP00000496571.1
 
Protein coding
-A0A2R8Y883 -GENCODE basic
ENST00000611510.5RNASEH2B-2061257282aaENSP00000481236.3
 
Protein coding
-A0A087WXR7 -GENCODE basicTSL:5
ENST00000647387.1RNASEH2B-2461251227aaENSP00000495487.1
 
Protein coding
-A0A2R8YEC1 -GENCODE basic
ENST00000643215.1RNASEH2B-2171185238aaENSP00000495031.1
 
Protein coding
-A0A2R8Y687 -CDS 5' incomplete
ENST00000645370.1RNASEH2B-2321139229aaENSP00000494019.1
 
Protein coding
-A0A2R8Y4S2 -CDS 5' incomplete
ENST00000642721.1RNASEH2B-2141033320aaENSP00000495650.1
 
Protein coding
-A0A2R8Y6Y1 -CDS 3' incomplete
ENST00000642995.1RNASEH2B-215922273aaENSP00000493499.1
 
Protein coding
-A0A2R8YCX2 -GENCODE basic
ENST00000637648.2RNASEH2B-21178089aaENSP00000490077.2
 
Protein coding
-A0A1B0GUE7 -TSL:3CDS 3' incomplete
ENST00000645912.1RNASEH2B-23674692aaENSP00000494091.1
 
Protein coding
-A0A2R8Y4Y9 -CDS 5' incomplete
ENST00000644034.1RNASEH2B-223621128aaENSP00000495456.1
 
Protein coding
-A0A2R8YEB4 -GENCODE basic
ENST00000643529.1RNASEH2B-220508104aaENSP00000495920.1
 
Protein coding
-A0A2R8YEU9 -CDS 5' incomplete
ENST00000643405.1RNASEH2B-218492164aaENSP00000493777.1
 
Protein coding
-A0A2R8Y459 -CDS 5' and 3' incomplete
ENST00000636524.2RNASEH2B-2104666aaENSP00000489723.2
 
Protein coding
-A0A1B0GTJ2 -TSL:4CDS 3' incomplete
ENST00000644183.1RNASEH2B-224173276aaENSP00000495657.1
 
Nonsense mediated decay
-A0A2R8YEK5 -CDS 5' incomplete
ENST00000646092.1RNASEH2B-2391441268aaENSP00000496293.1
 
Nonsense mediated decay
-A0A2R8Y7Q3 --
ENST00000644297.1RNASEH2B-225142848aaENSP00000495519.1
 
Nonsense mediated decay
-A0A2R8YEQ4 --
ENST00000644425.1RNASEH2B-2271166243aaENSP00000495302.1
 
Nonsense mediated decay
-A0A2R8YE60 -CDS 5' incomplete
ENST00000644518.1RNASEH2B-228104448aaENSP00000495793.1
 
Nonsense mediated decay
-A0A2R8YEQ4 --
ENST00000642207.1RNASEH2B-21270763aaENSP00000496227.1
 
Nonsense mediated decay
-A0A2R8Y7M7 -CDS 5' incomplete
ENST00000646339.1RNASEH2B-24163033aaENSP00000495773.1
 
Nonsense mediated decay
-A0A2R8Y6U1 -CDS 5' incomplete
ENST00000643462.1RNASEH2B-21949147aaENSP00000496130.1
 
Nonsense mediated decay
-A0A2R8Y7A3 --
ENST00000645712.1RNASEH2B-2351254No protein-
 
Processed transcript
----
ENST00000495244.7RNASEH2B-205977No protein-
 
Processed transcript
---TSL:5
ENST00000459681.3RNASEH2B-203649No protein-
 
Processed transcript
---TSL:5
ENST00000646279.1RNASEH2B-2407282No protein-
 
Retained intron
----
ENST00000645549.1RNASEH2B-2334881No protein-
 
Retained intron
----
ENST00000613449.4RNASEH2B-2073328No protein-
 
Retained intron
---TSL:2
ENST00000645333.1RNASEH2B-2312196No protein-
 
Retained intron
----
ENST00000645201.1RNASEH2B-2302015No protein-
 
Retained intron
----
ENST00000465541.2RNASEH2B-2041952No protein-
 
Retained intron
---TSL:5
ENST00000644420.1RNASEH2B-2261885No protein-
 
Retained intron
----
ENST00000646964.1RNASEH2B-2451806No protein-
 
Retained intron
----
ENST00000621641.1RNASEH2B-209409No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,567 bps, Translation length: 254 residues

Version

ENST00000646731.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x320b2538)