Human (GRCh38.p14)
Description

integrin subunit alpha 7 [Source:HGNC Symbol;Acc:HGNC:6143]

Location
About this transcript

This transcript has 19 exons, is associated with 6632 variant alleles and maps to 558 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000257879.11ITGA7-20141261137aaENSP00000257879.7
 
Protein coding
CCDS8888Q13683-7 NM_002206.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENST00000553804.6ITGA7-20641381141aaENSP00000452120.1
 
Protein coding
CCDS55832Q13683-3 -GENCODE basicAPPRIS P3TSL:1
ENST00000347027.10ITGA7-20240841131aaENSP00000343009.6
 
Protein coding
CCDS91703J3KNV4 -GENCODE basicTSL:5
ENST00000555728.5ITGA7-21339301181aaENSP00000452387.1
 
Protein coding
CCDS91704Q13683-1 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000691973.1ITGA7-22738111117aaENSP00000509141.1
 
Protein coding
A0A8I5KSX0 -GENCODE basic
ENST00000452168.6ITGA7-20337631044aaENSP00000393844.2
 
Protein coding
CCDS44914Q13683-13 -GENCODE basicTSL:2
ENST00000557555.3ITGA7-22037391122aaENSP00000451039.3
 
Protein coding
H0YJ98 -GENCODE basicTSL:5
ENST00000557257.2ITGA7-2183056979aaENSP00000450578.2
 
Protein coding
G3V2C6 -GENCODE basicTSL:4
ENST00000686981.1ITGA7-221388048aaENSP00000510795.1
 
Nonsense mediated decay
G3V2Q6 --
ENST00000553893.6ITGA7-207377848aaENSP00000452467.1
 
Nonsense mediated decay
G3V2Q6 -TSL:4
ENST00000691052.1ITGA7-2253753447aaENSP00000508886.1
 
Nonsense mediated decay
A0A8I5KXI3 --
ENST00000691846.1ITGA7-2262700120aaENSP00000508870.1
 
Nonsense mediated decay
A0A8I5QJA5 -CDS 5' incomplete
ENST00000554327.6ITGA7-2082571311aaENSP00000450693.2
 
Nonsense mediated decay
H0YJ26 -TSL:2CDS 5' incomplete
ENST00000555687.5ITGA7-21257355aaENSP00000451311.1
 
Nonsense mediated decay
G3V3L8 -TSL:5
ENST00000555809.1ITGA7-21456148aaENSP00000450798.1
 
Nonsense mediated decay
G3V2Q6 -TSL:3
ENST00000556273.5ITGA7-21555898aaENSP00000450679.1
 
Nonsense mediated decay
G3V2I4 -TSL:4
ENST00000554724.5ITGA7-21155235aaENSP00000452043.1
 
Nonsense mediated decay
H0YJS5 -TSL:5CDS 5' incomplete
ENST00000553276.1ITGA7-204972No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000557058.2ITGA7-2173302No protein-
 
Retained intron
--TSL:5
ENST00000688413.1ITGA7-2232964No protein-
 
Retained intron
---
ENST00000687390.1ITGA7-2221993No protein-
 
Retained intron
---
ENST00000689678.1ITGA7-2241093No protein-
 
Retained intron
---
ENST00000554543.1ITGA7-210707No protein-
 
Retained intron
--TSL:3
ENST00000554359.1ITGA7-209588No protein-
 
Retained intron
--TSL:4
ENST00000553737.5ITGA7-205570No protein-
 
Retained intron
--TSL:3
ENST00000556371.1ITGA7-216493No protein-
 
Retained intron
--TSL:4
ENST00000557488.1ITGA7-219296No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 19, Coding exons: 5, Transcript length: 2,700 bps, Translation length: 120 residues

Incomplete CDS

CDS 5' incomplete

Version

ENST00000691846.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.