Human (GRCh38.p14)
Description

integrin subunit alpha 7 [Source:HGNC Symbol;Acc:HGNC:6143]

Location
About this transcript

This transcript has 26 exons, is annotated with 45 domains and features, is associated with 10866 variant alleles and maps to 750 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000257879.11ITGA7-20141261137aaENSP00000257879.7
 
Protein coding
CCDS8888Q13683-7 NM_002206.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENST00000553804.6ITGA7-20641381141aaENSP00000452120.1
 
Protein coding
CCDS55832Q13683-3 -GENCODE basicAPPRIS P3TSL:1
ENST00000347027.10ITGA7-20240841131aaENSP00000343009.6
 
Protein coding
CCDS91703J3KNV4 -GENCODE basicTSL:5
ENST00000555728.5ITGA7-21339301181aaENSP00000452387.1
 
Protein coding
CCDS91704Q13683-1 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000691973.1ITGA7-22738111117aaENSP00000509141.1
 
Protein coding
A0A8I5KSX0 -GENCODE basic
ENST00000452168.6ITGA7-20337631044aaENSP00000393844.2
 
Protein coding
CCDS44914Q13683-13 -GENCODE basicTSL:2
ENST00000557555.3ITGA7-22037391122aaENSP00000451039.3
 
Protein coding
H0YJ98 -GENCODE basicTSL:5
ENST00000557257.2ITGA7-2183056979aaENSP00000450578.2
 
Protein coding
G3V2C6 -GENCODE basicTSL:4
ENST00000686981.1ITGA7-221388048aaENSP00000510795.1
 
Nonsense mediated decay
G3V2Q6 --
ENST00000553893.6ITGA7-207377848aaENSP00000452467.1
 
Nonsense mediated decay
G3V2Q6 -TSL:4
ENST00000691052.1ITGA7-2253753447aaENSP00000508886.1
 
Nonsense mediated decay
A0A8I5KXI3 --
ENST00000691846.1ITGA7-2262700120aaENSP00000508870.1
 
Nonsense mediated decay
A0A8I5QJA5 -CDS 5' incomplete
ENST00000554327.6ITGA7-2082571311aaENSP00000450693.2
 
Nonsense mediated decay
H0YJ26 -TSL:2CDS 5' incomplete
ENST00000555687.5ITGA7-21257355aaENSP00000451311.1
 
Nonsense mediated decay
G3V3L8 -TSL:5
ENST00000555809.1ITGA7-21456148aaENSP00000450798.1
 
Nonsense mediated decay
G3V2Q6 -TSL:3
ENST00000556273.5ITGA7-21555898aaENSP00000450679.1
 
Nonsense mediated decay
G3V2I4 -TSL:4
ENST00000554724.5ITGA7-21155235aaENSP00000452043.1
 
Nonsense mediated decay
H0YJS5 -TSL:5CDS 5' incomplete
ENST00000553276.1ITGA7-204972No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000557058.2ITGA7-2173302No protein-
 
Retained intron
--TSL:5
ENST00000688413.1ITGA7-2232964No protein-
 
Retained intron
---
ENST00000687390.1ITGA7-2221993No protein-
 
Retained intron
---
ENST00000689678.1ITGA7-2241093No protein-
 
Retained intron
---
ENST00000554543.1ITGA7-210707No protein-
 
Retained intron
--TSL:3
ENST00000554359.1ITGA7-209588No protein-
 
Retained intron
--TSL:4
ENST00000553737.5ITGA7-205570No protein-
 
Retained intron
--TSL:3
ENST00000556371.1ITGA7-216493No protein-
 
Retained intron
--TSL:4
ENST00000557488.1ITGA7-219296No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 26, Coding exons: 26, Transcript length: 3,739 bps, Translation length: 1,122 residues

Transcript Support Level (TSL)

TSL:5

Version

ENST00000557555.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred transcript model [Definitions]

not organism-supported

RNA-Seq supported partial

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.