Human (GRCh38.p14)
Description

synaptotagmin binding cytoplasmic RNA interacting protein [Source:HGNC Symbol;Acc:HGNC:16918]

Gene Synonyms

DJ3J17.2, GRY-RBP, HNRNP-Q, HNRNPQ, HNRPQ1, NSAP1

Location
About this transcript

This transcript has 11 exons, is annotated with 32 domains and features, is associated with 16602 variant alleles and maps to 559 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000369622.8SYNCRIP-2022754623aaENSP00000358635.3
 
Protein coding
CCDS5005O60506-1 NM_006372.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000616122.5SYNCRIP-2046770464aaENSP00000484577.1
 
Protein coding
CCDS75491B7Z645 -GENCODE basicTSL:1
ENST00000676637.1SYNCRIP-2076591562aaENSP00000502974.1
 
Protein coding
CCDS55041O60506-3 -GENCODE basicAPPRIS ALT1
ENST00000678528.1SYNCRIP-2156511562aaENSP00000503246.1
 
Protein coding
CCDS55041O60506-3 -GENCODE basicAPPRIS ALT1
ENST00000355238.11SYNCRIP-2016443562aaENSP00000347380.6
 
Protein coding
CCDS55041O60506-3 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000678878.1SYNCRIP-2196427561aaENSP00000504086.1
 
Protein coding
CCDS93966A0A7I2YQN2 -GENCODE basicAPPRIS ALT1
ENST00000677771.1SYNCRIP-2136336561aaENSP00000504816.1
 
Protein coding
CCDS93966A0A7I2YQN2 -GENCODE basicAPPRIS ALT1
ENST00000676630.1SYNCRIP-2063314524aaENSP00000503268.1
 
Protein coding
A0A7I2V346 -GENCODE basic
ENST00000678899.1SYNCRIP-2203310525aaENSP00000503183.1
 
Protein coding
CCDS93965A0A7I2V309 -GENCODE basic
ENST00000678618.1SYNCRIP-2173098465aaENSP00000504657.1
 
Protein coding
A0A7I2YQV8 -GENCODE basic
ENST00000710383.1SYNCRIP-2222859678aaENSP00000518240.1
 
Protein coding
--GENCODE basic
ENST00000678355.1SYNCRIP-2142561623aaENSP00000503783.1
 
Protein coding
CCDS5005O60506-1 -GENCODE basicAPPRIS P3
ENST00000676688.1SYNCRIP-2082552623aaENSP00000504706.1
 
Protein coding
CCDS5005O60506-1 -GENCODE basicAPPRIS P3
ENST00000678816.1SYNCRIP-2182317337aaENSP00000504718.1
 
Protein coding
A0A7I2V5Q6 -GENCODE basic
ENST00000677059.1SYNCRIP-2092161545aaENSP00000504133.1
 
Protein coding
A0A7I2V4Z0 -GENCODE basic
ENST00000676542.1SYNCRIP-2052158545aaENSP00000504277.1
 
Protein coding
A0A7I2V4Z0 -GENCODE basic
ENST00000678930.1SYNCRIP-2212128588aaENSP00000504120.1
 
Protein coding
CCDS93967O60506-2 -GENCODE basic
ENST00000678589.1SYNCRIP-2161823490aaENSP00000502879.1
 
Protein coding
A0A7I2V2F2 -GENCODE basic
ENST00000444272.2SYNCRIP-2031804562aaENSP00000397782.2
 
Protein coding
CCDS55041O60506-3 -GENCODE basicAPPRIS ALT1TSL:3
ENST00000677481.1SYNCRIP-2106044165aaENSP00000503778.1
 
Nonsense mediated decay
A0A7I2V4J0 --
ENST00000677514.1SYNCRIP-211242167aaENSP00000502885.1
 
Nonsense mediated decay
A0A7I2V2F0 --
ENST00000677646.1SYNCRIP-2125951No protein-
 
Retained intron
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Statistics

Exons: 11, Coding exons: 10, Transcript length: 2,552 bps, Translation length: 623 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60506

CCDS

This transcript is a member of the Human CCDS set: CCDS5005

Version

ENST00000676688.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.