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Description

sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]

Gene Synonyms

FEB3, GEFSP2, HBSCI, NAC1, Nav1.1, SCN1, SMEI

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000674923.1SCN1A-224119402009aaENSP00000501589.1
 
Protein coding
CCDS54413P35498-1 NM_001165963.4MANE Select v0.95Ensembl CanonicalGENCODE basicAPPRIS ALT1
ENST00000641575.1SCN1A-218128741997aaENSP00000492917.1
 
Protein coding
CCDS86891A0A286YF26 -GENCODE basicAPPRIS ALT1
ENST00000303395.9SCN1A-201118532009aaENSP00000303540.4
 
Protein coding
CCDS54413P35498-1 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000637988.1SCN1A-21685621998aaENSP00000490780.1
 
Protein coding
CCDS33316P35498-2 -GENCODE basicAPPRIS P3TSL:5
ENST00000635750.1SCN1A-20882991998aaENSP00000490799.1
 
Protein coding
CCDS33316P35498-2 -GENCODE basicAPPRIS P3TSL:5
ENST00000375405.7SCN1A-20280971998aaENSP00000364554.3
 
Protein coding
CCDS33316P35498-2 -GENCODE basicAPPRIS P3TSL:5
ENST00000409050.1SCN1A-20359461981aaENSP00000386312.1
 
Protein coding
CCDS54414P35498-3 -GENCODE basicTSL:5
ENST00000641603.1SCN1A-219125061915aaENSP00000492945.1
 
Protein coding
-A0A286YEQ8 -GENCODE basic
ENST00000635776.1SCN1A-209101071618aaENSP00000490692.1
 
Protein coding
-A0A1B0GVX7 -GENCODE basicTSL:5
ENST00000640036.1SCN1A-21781311998aaENSP00000491573.1
 
Protein coding
-A0A1W2PPJ3 -GENCODE basicTSL:5
ENST00000637285.2SCN1A-2141333aaENSP00000490612.1
 
Protein coding
---TSL:5CDS 3' incomplete
ENST00000641996.1SCN1A-22012903149aaENSP00000493054.1
 
Nonsense mediated decay
-A0A286YFA8 --
ENST00000636194.1SCN1A-2118508829aaENSP00000490288.1
 
Nonsense mediated decay
-A0A1B0GUX7 -TSL:5
ENST00000671940.1SCN1A-2228315629aaENSP00000500336.1
 
Nonsense mediated decay
-A0A5F9ZHI6 --
ENST00000689288.1SCN1A-2258258685aaENSP00000509637.1
 
Nonsense mediated decay
----
ENST00000637038.1SCN1A-2134268331aaENSP00000490184.1
 
Nonsense mediated decay
-A0A1B0GUN7 -TSL:5CDS 5' incomplete
ENST00000636759.1SCN1A-2123606145aaENSP00000490895.1
 
Nonsense mediated decay
-A0A1B0GWE6 -TSL:5
ENST00000635893.1SCN1A-21016830aaENSP00000489986.1
 
Nonsense mediated decay
-A0A1B0GU68 -TSL:5CDS 5' incomplete
ENST00000642141.1SCN1A-221921No protein-
 
Processed transcript
----
ENST00000673490.1SCN1A-22310569No protein-
 
Retained intron
----
ENST00000637968.1SCN1A-2154614No protein-
 
Retained intron
---TSL:5
ENST00000507401.2SCN1A-206711No protein-
 
Retained intron
---TSL:3
ENST00000625916.1SCN1A-207560No protein-
 
Retained intron
---TSL:4
ENST00000473295.2SCN1A-204544No protein-
 
Retained intron
---TSL:4
ENST00000491429.1SCN1A-205542No protein-
 
Retained intron
---TSL:4
Description

coiled-coil alpha-helical rod protein 1 [Source:HGNC Symbol;Acc:HGNC:13930]

Gene Synonyms

C6orf18, HCR

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000610825.1CCHCR1-3152954870aaENSP00000479660.1
 
Protein coding
-A0A0G2JPU2 -Ensembl CanonicalGENCODE basicTSL:5
ENST00000416163.6CCHCR1-3012958782aaENSP00000408012.2
 
Protein coding
-M1T2K8 Q8TD31 -GENCODE basicTSL:1
ENST00000425620.6CCHCR1-3022600782aaENSP00000393042.2
 
Protein coding
-M1T2K8 Q8TD31 -GENCODE basicTSL:1
ENST00000400351.5CCHCR1-3002494729aaENSP00000383204.1
 
Protein coding
-A0A0G2JII5 -GENCODE basicTSL:5
ENST00000444737.5CCHCR1-3031000316aaENSP00000409157.1
 
Protein coding
-A0A0G2JJK2 -TSL:5CDS 3' incomplete
ENST00000451470.5CCHCR1-306922256aaENSP00000390313.1
 
Protein coding
-A0A0G2JHL3 -TSL:5CDS 5' incomplete
ENST00000451337.5CCHCR1-305838118aaENSP00000396155.1
 
Protein coding
-A0A0G2JI86 -TSL:2CDS 3' incomplete
ENST00000450631.5CCHCR1-304740171aaENSP00000399391.1
 
Protein coding
-A0A0G2JI40 -TSL:5CDS 3' incomplete
ENST00000454570.5CCHCR1-308700188aaENSP00000401869.1
 
Protein coding
-A0A0G2JIT9 -TSL:5CDS 3' incomplete
ENST00000455669.5CCHCR1-309646152aaENSP00000408590.1
 
Protein coding
-A0A0G2JJK7 -TSL:4CDS 3' incomplete
ENST00000452419.1CCHCR1-307470126aaENSP00000389758.1
 
Protein coding
-Q5STF0 -TSL:3CDS 3' incomplete
ENST00000466904.5CCHCR1-312601No protein-
 
Processed transcript
---TSL:3
ENST00000488698.1CCHCR1-313582No protein-
 
Processed transcript
---TSL:3
ENST00000461293.1CCHCR1-310780No protein-
 
Retained intron
---TSL:2
ENST00000494515.1CCHCR1-314577No protein-
 
Retained intron
---TSL:5
ENST00000463211.1CCHCR1-311512No protein-
 
Retained intron
---TSL:2
Description

dystrobrevin alpha [Source:HGNC Symbol;Acc:HGNC:3057]

Gene Synonyms

D18S892E, DRP3, DTN, DTN-1, DTN-2, DTN-3

Location
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000444659.6DTNA-2076572770aaENSP00000405819.2
 
Protein coding
-Q9Y4J8-1 NM_001386795.1MANE Select v0.95Ensembl CanonicalGENCODE basicTSL:5
ENST00000399121.9DTNA-2066490690aaENSP00000382072.5
 
Protein coding
CCDS56061Q9Y4J8-14 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000595022.5DTNA-2256016683aaENSP00000473078.1
 
Protein coding
CCDS59311Q9Y4J8-13 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000283365.14DTNA-2025912683aaENSP00000283365.10
 
Protein coding
CCDS59311Q9Y4J8-2 -GENCODE basicAPPRIS ALT1TSL:5
ENST00000683379.1DTNA-2565888686aaENSP00000507995.1
 
Protein coding
CCDS45848--GENCODE basicAPPRIS ALT1
ENST00000348997.9DTNA-2044518567aaENSP00000336682.4
 
Protein coding
CCDS11908Q9Y4J8-4 -GENCODE basicTSL:1
ENST00000683705.1DTNA-2573429683aaENSP00000507911.1
 
Protein coding
CCDS59311--GENCODE basicAPPRIS ALT1
ENST00000684359.1DTNA-2613353686aaENSP00000507300.1
 
Protein coding
CCDS45848--GENCODE basicAPPRIS ALT1
ENST00000681241.1DTNA-2453276683aaENSP00000506495.1
 
Protein coding
CCDS59311--GENCODE basicAPPRIS ALT1
ENST00000598334.5DTNA-2303201724aaENSP00000470152.1
 
Protein coding
CCDS59312Q9Y4J8-15 -GENCODE basicTSL:1
ENST00000679936.1DTNA-2392707513aaENSP00000506586.1
 
Protein coding
CCDS59309--GENCODE basicAPPRIS ALT1
ENST00000598774.6DTNA-2312671513aaENSP00000472031.1
 
Protein coding
CCDS59309Q9Y4J8-5 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000682483.1DTNA-2512607510aaENSP00000508159.1
 
Protein coding
CCDS59310--GENCODE basicAPPRIS ALT1
ENST00000680346.1DTNA-2402511513aaENSP00000505947.1
 
Protein coding
CCDS59309--GENCODE basicAPPRIS ALT1
ENST00000598142.5DTNA-2292509686aaENSP00000470716.1
 
Protein coding
CCDS45848Q9Y4J8-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000683370.1DTNA-2552455510aaENSP00000507104.1
 
Protein coding
CCDS59310--GENCODE basicAPPRIS ALT1
ENST00000684734.1DTNA-2652012371aaENSP00000506928.1
 
Protein coding
CCDS56060--GENCODE basicAPPRIS ALT1
ENST00000269192.11DTNA-2011964452aaENSP00000269192.7
 
Protein coding
CCDS56062Q9Y4J8-11 -GENCODE basicTSL:2
ENST00000597599.5DTNA-2271869510aaENSP00000473119.1
 
Protein coding
CCDS59310Q9Y4J8-16 -GENCODE basicAPPRIS ALT1TSL:2
ENST00000684610.1DTNA-2641834371aaENSP00000508348.1
 
Protein coding
CCDS56060--GENCODE basicAPPRIS ALT1
ENST00000683876.1DTNA-2581809192aaENSP00000507423.1
 
Protein coding
CCDS59314--GENCODE basic
ENST00000591182.5DTNA-2211787391aaENSP00000467720.1
 
Protein coding
CCDS11909Q9Y4J8-6 -GENCODE basicTSL:1
ENST00000597674.5DTNA-2281732192aaENSP00000471783.1
 
Protein coding
CCDS59314Q9Y4J8-8 -GENCODE basicTSL:1
ENST00000315456.10DTNA-2031706374aaENSP00000322519.5
 
Protein coding
CCDS42426Q9Y4J8-7 -GENCODE basicAPPRIS P3TSL:1
ENST00000554864.7DTNA-2081680371aaENSP00000451516.2
 
Protein coding
CCDS56060Q9Y4J8-9 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000556414.7DTNA-2091626395aaENSP00000452255.2
 
Protein coding
CCDS56063Q9Y4J8-10 -GENCODE basicTSL:2
ENST00000596745.5DTNA-2261508320aaENSP00000469121.1
 
Protein coding
CCDS59313Q9Y4J8-12 -GENCODE basicTSL:2
ENST00000684377.1DTNA-2626139618aaENSP00000506757.1
 
Protein coding
---GENCODE basic
ENST00000681470.1DTNA-2475776682aaENSP00000505722.1
 
Protein coding
---GENCODE basicAPPRIS ALT1
ENST00000682129.1DTNA-2495154422aaENSP00000506763.1
 
Protein coding
---GENCODE basic
ENST00000681759.1DTNA-2484685403aaENSP00000506633.1
 
Protein coding
---CDS 5' incomplete
ENST00000680767.2DTNA-2423783617aaENSP00000505379.2
 
Protein coding
---GENCODE basic
ENST00000684266.1DTNA-2603464713aaENSP00000507106.1
 
Protein coding
---GENCODE basic
ENST00000679796.1DTNA-2383452770aaENSP00000506659.1
 
Protein coding
---GENCODE basic
ENST00000680822.1DTNA-2433303713aaENSP00000505718.1
 
Protein coding
---GENCODE basic
ENST00000682581.1DTNA-2523167418aaENSP00000507924.1
 
Protein coding
---GENCODE basic
ENST00000682923.1DTNA-2533110418aaENSP00000508131.1
 
Protein coding
---GENCODE basic
ENST00000681274.1DTNA-2462923415aaENSP00000505183.1
 
Protein coding
---GENCODE basic
ENST00000679678.1DTNA-2362241279aaENSP00000505120.1
 
Protein coding
---GENCODE basic
ENST00000399113.7DTNA-2052232743aaENSP00000382064.3
 
Protein coding
-Q9Y4J8-1 -GENCODE basicTSL:5
ENST00000601632.6DTNA-2341954218aaENSP00000507080.1
 
Protein coding
---GENCODE basicTSL:1
ENST00000684228.1DTNA-2591933187aaENSP00000508278.1
 
Protein coding
---GENCODE basic
ENST00000601125.5DTNA-2331931365aaENSP00000470247.1
 
Protein coding
-M0QZ28 -GENCODE basicTSL:2
ENST00000680366.1DTNA-2411592373aaENSP00000506271.1
 
Protein coding
---CDS 3' incomplete
ENST00000684560.1DTNA-2631457327aaENSP00000507082.1
 
Protein coding
---CDS 3' incomplete
ENST00000683092.1DTNA-2541391330aaENSP00000508057.1
 
Protein coding
---CDS 3' incomplete
ENST00000599844.5DTNA-232853162aaENSP00000470934.1
 
Protein coding
-M0R021 -GENCODE basicTSL:1
ENST00000590598.5DTNA-218682133aaENSP00000468473.1
 
Protein coding
-K7ERZ2 -TSL:5CDS 3' incomplete
ENST00000679731.1DTNA-23766053aaENSP00000506345.1
 
Protein coding
---GENCODE basic
ENST00000590412.5DTNA-217604119aaENSP00000465063.1
 
Protein coding
-K7EJ84 -TSL:3CDS 3' incomplete
ENST00000588125.5DTNA-21258743aaENSP00000466978.1
 
Protein coding
-K7ENJ7 -TSL:4CDS 3' incomplete
ENST00000588684.5DTNA-21457618aaENSP00000464904.1
 
Protein coding
-K7EIV1 -TSL:4CDS 3' incomplete
ENST00000585446.1DTNA-21056087aaENSP00000507645.1
 
Protein coding
---TSL:4CDS 3' incomplete
ENST00000591816.6DTNA-22253444aaENSP00000466573.2
 
Protein coding
-K7EMN1 -TSL:4CDS 3' incomplete
ENST00000679372.1DTNA-235328839aaENSP00000506098.1
 
Nonsense mediated decay
----
ENST00000682406.1DTNA-250123439aaENSP00000506790.1
 
Nonsense mediated decay
----
ENST00000681065.1DTNA-2441026249aaENSP00000504909.1
 
Nonsense mediated decay
----
ENST00000588949.6DTNA-21657839aaENSP00000468631.2
 
Nonsense mediated decay
-K7ESB2 -TSL:4
ENST00000592449.1DTNA-224954No protein-
 
Processed transcript
---TSL:2
ENST00000588771.1DTNA-215593No protein-
 
Processed transcript
---TSL:4
ENST00000587723.1DTNA-211555No protein-
 
Processed transcript
---TSL:4
ENST00000588506.1DTNA-213528No protein-
 
Processed transcript
---TSL:4
ENST00000590831.2DTNA-220847No protein-
 
Retained intron
---TSL:2
ENST00000592114.1DTNA-223653No protein-
 
Retained intron
---TSL:4
ENST00000590727.1DTNA-219556No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 22, Coding exons: 19, Transcript length: 5,888 bps, Translation length: 686 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS45848

Version

ENST00000683379.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript-based displays

    HASH(0x285090d0)