Human (GRCh38.p14)
Description

PATJ crumbs cell polarity complex component [Source:HGNC Symbol;Acc:HGNC:28881]

Gene Synonyms

CIPP, INADL

Location
About this transcript

This transcript has 33 exons, is associated with 150441 variant alleles and maps to 902 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000642238.2PATJ-21586211882aaENSP00000494277.1
 
Protein coding
CCDS85980A0A2R8Y549 NM_001350145.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1
ENST00000371158.6PATJ-20285051801aaENSP00000360200.2
 
Protein coding
CCDS617Q8NI35-1 -GENCODE basicTSL:5
ENST00000646453.1PATJ-2165234666aaENSP00000494824.1
 
Protein coding
A0A2R8Y5I3 -GENCODE basic
ENST00000635137.1PATJ-2132298593aaENSP00000489159.1
 
Protein coding
A0A0U1RQT2 -GENCODE basicTSL:1
ENST00000307297.8PATJ-2011585452aaENSP00000307496.8
 
Protein coding
B4DE90 -GENCODE basicTSL:2
ENST00000494842.2PATJ-211701146aaENSP00000489200.1
 
Protein coding
A0A0U1RQW4 -TSL:5CDS 5' incomplete
ENST00000465798.2PATJ-204569139aaENSP00000489130.1
 
Protein coding
A0A0U1RQR3 -TSL:2CDS 5' incomplete
ENST00000490547.2PATJ-209387111aaENSP00000489475.1
 
Protein coding
A0A0U1RRD7 -TSL:5CDS 5' incomplete
ENST00000635023.1PATJ-2125242683aaENSP00000489335.1
 
Nonsense mediated decay
A0A0U1RR46 -TSL:5
ENST00000484937.5PATJ-20749901134aaENSP00000433669.1
 
Nonsense mediated decay
Q8NI35-5 -TSL:5
ENST00000493967.1PATJ-210574No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000484562.5PATJ-2065448No protein-
 
Retained intron
--TSL:1
ENST00000459752.5PATJ-2035349No protein-
 
Retained intron
--TSL:1
ENST00000635214.1PATJ-2144863No protein-
 
Retained intron
--TSL:1
ENST00000472512.2PATJ-205946No protein-
 
Retained intron
--TSL:2
ENST00000488913.1PATJ-208532No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 33, Coding exons: 27, Transcript length: 4,990 bps, Translation length: 1,134 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NI35

Transcript Support Level (TSL)

TSL:5

Version

ENST00000484937.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.