Human (GRCh38.p14)
Description

pentatricopeptide repeat domain 3 [Source:HGNC Symbol;Acc:HGNC:24717]

Gene Synonyms

DKFZP666K071, FLJ20758

Location
About this transcript

This transcript has 24 exons, is annotated with 48 domains and features, is associated with 16399 variant alleles and maps to 979 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000254630.12PTCD3-2016681689aaENSP00000254630.7
 
Protein coding
CCDS33235Q96EY7-1 NM_017952.6MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000409783.6PTCD3-203587187aaENSP00000386922.3
 
Protein coding
B8ZZQ4 -TSL:5CDS 3' incomplete
ENST00000627371.1PTCD3-22021069aaENSP00000487135.1
 
Protein coding
F8WE76 -GENCODE basicTSL:5
ENST00000418628.5PTCD3-20453269aaENSP00000394441.1
 
Nonsense mediated decay
F8WE76 -TSL:4
ENST00000409326.6PTCD3-20252278aaENSP00000386963.2
 
Nonsense mediated decay
F8WBP9 -TSL:4
ENST00000465560.5PTCD3-206747No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000488801.5PTCD3-217568No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000477520.1PTCD3-212556No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000494323.5PTCD3-219540No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000487043.5PTCD3-2161054No protein-
 
Retained intron
--TSL:3
ENST00000484203.5PTCD3-215928No protein-
 
Retained intron
--TSL:2
ENST00000464541.5PTCD3-205890No protein-
 
Retained intron
--TSL:5
ENST00000469585.5PTCD3-208885No protein-
 
Retained intron
--TSL:2
ENST00000493430.5PTCD3-218782No protein-
 
Retained intron
--TSL:3
ENST00000467273.5PTCD3-207757No protein-
 
Retained intron
--TSL:3
ENST00000476215.5PTCD3-211754No protein-
 
Retained intron
--TSL:3
ENST00000480102.1PTCD3-213589No protein-
 
Retained intron
--TSL:4
ENST00000473829.1PTCD3-210587No protein-
 
Retained intron
--TSL:3
ENST00000483925.1PTCD3-214576No protein-
 
Retained intron
--TSL:3
ENST00000472044.1PTCD3-209293No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 24, Coding exons: 24, Transcript length: 6,681 bps, Translation length: 689 residues

MANE

This MANE Select transcript contains ENSP00000254630 and matches to NM_017952.6 and NP_060422.4

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96EY7

CCDS

This transcript is a member of the Human CCDS set: CCDS33235

Transcript Support Level (TSL)

TSL:1

Version

ENST00000254630.12

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.