Human (GRCh38.p14)
Description

PTPRF interacting protein alpha 1 [Source:HGNC Symbol;Acc:HGNC:9245]

Gene Synonyms

LIP.1, LIPRIN

Location
About this transcript

This transcript has 2 exons, is associated with 322 variant alleles and maps to 92 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000253925.12PPFIA1-20152401202aaENSP00000253925.7
 
Protein coding
CCDS31627Q13136-1 NM_003626.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000644155.1PPFIA1-22659961224aaENSP00000496327.1
 
Protein coding
A0A2R8Y7R9 -CDS 5' incomplete
ENST00000389547.7PPFIA1-20241331185aaENSP00000374198.3
 
Protein coding
CCDS31628Q13136-2 -GENCODE basicTSL:1
ENST00000528853.2PPFIA1-2121362253aaENSP00000434692.2
 
Protein coding
H0YDZ8 -TSL:3CDS 5' incomplete
ENST00000528750.1PPFIA1-2111168389aaENSP00000434445.1
 
Protein coding
H0YDW2 -TSL:5CDS 5' and 3' incomplete
ENST00000638133.1PPFIA1-225814271aaENSP00000490647.1
 
Protein coding
A0A1B0GVT3 -TSL:3CDS 5' and 3' incomplete
ENST00000530798.5PPFIA1-217710237aaENSP00000433114.1
 
Protein coding
H0YD72 -TSL:5CDS 5' and 3' incomplete
ENST00000530746.1PPFIA1-216575158aaENSP00000432722.1
 
Protein coding
E9PPF6 -TSL:3CDS 3' incomplete
ENST00000532024.1PPFIA1-22056399aaENSP00000432065.1
 
Protein coding
E9PID5 -TSL:3CDS 3' incomplete
ENST00000648755.1PPFIA1-2276705166aaENSP00000497908.1
 
Nonsense mediated decay
A0A3B3ITS2 --
ENST00000532504.5PPFIA1-2225159583aaENSP00000433619.1
 
Nonsense mediated decay
E9PJZ7 -TSL:1
ENST00000526262.5PPFIA1-2064537387aaENSP00000435752.1
 
Nonsense mediated decay
H0YEF9 -TSL:1CDS 5' incomplete
ENST00000530390.5PPFIA1-21487946aaENSP00000435978.1
 
Nonsense mediated decay
H0YEK0 -TSL:5CDS 5' incomplete
ENST00000526369.3PPFIA1-20856497aaENSP00000437024.1
 
Nonsense mediated decay
H0YF15 -TSL:4CDS 5' incomplete
ENST00000533894.5PPFIA1-22455333aaENSP00000432913.1
 
Nonsense mediated decay
H0YD39 -TSL:4CDS 5' incomplete
ENST00000530548.5PPFIA1-2153774No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000530294.5PPFIA1-213977No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000526347.5PPFIA1-207862No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000532443.1PPFIA1-221587No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000526074.5PPFIA1-205573No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000528284.1PPFIA1-210568No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000530932.1PPFIA1-218536No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000525922.2PPFIA1-204358No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000531657.1PPFIA1-2193036No protein-
 
Retained intron
--TSL:2
ENST00000527612.1PPFIA1-209598No protein-
 
Retained intron
--TSL:3
ENST00000532793.1PPFIA1-223550No protein-
 
Retained intron
--TSL:3
ENST00000525530.1PPFIA1-203514No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 2, Coding exons: 0, Transcript length: 550 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000532793.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.