Human (GRCh38.p14)
Description

RNA binding motif protein 39 [Source:HGNC Symbol;Acc:HGNC:15923]

Gene Synonyms

CAPER, CAPERALPHA, CC1.3, FSAP59, HCC1, RNPC2

Location
About this transcript

This transcript has 6 exons, is associated with 4277 variant alleles and maps to 518 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000253363.11RBM39-2015060530aaENSP00000253363.6
 
Protein coding
CCDS13266Q14498-1 NM_184234.3MANE SelectEnsembl CanonicalGENCODE basicTSL:1
ENST00000361162.10RBM39-2032831524aaENSP00000354437.6
 
Protein coding
CCDS13265Q14498-2 -GENCODE basicAPPRIS P1TSL:1
ENST00000528062.7RBM39-2432421508aaENSP00000436747.2
 
Protein coding
CCDS56186Q14498-3 -GENCODE basicTSL:1
ENST00000374038.7RBM39-2041026231aaENSP00000363150.3
 
Protein coding
Q5QP23 -TSL:5CDS 3' incomplete
ENST00000448303.5RBM39-2171008336aaENSP00000394824.1
 
Protein coding
H0Y4X3 -TSL:5CDS 5' and 3' incomplete
ENST00000426951.5RBM39-21184086aaENSP00000405916.1
 
Protein coding
H0Y6I9 -TSL:1CDS 5' incomplete
ENST00000434927.5RBM39-214716193aaENSP00000393493.1
 
Protein coding
Q5QP22 -TSL:5CDS 3' incomplete
ENST00000397370.3RBM39-20561295aaENSP00000380527.3
 
Protein coding
A8MYG5 -GENCODE basicTSL:2
ENST00000656873.1RBM39-246313140aaENSP00000499479.1
 
Nonsense mediated decay
F2Z3E6 --
ENST00000403542.6RBM39-206288340aaENSP00000385977.2
 
Nonsense mediated decay
F2Z3E6 -TSL:2
ENST00000338163.10RBM39-2022792423aaENSP00000344581.6
 
Nonsense mediated decay
G3XAC6 -TSL:2
ENST00000429968.5RBM39-212214947aaENSP00000395124.1
 
Nonsense mediated decay
F2Z2Z5 -TSL:2
ENST00000444878.5RBM39-216212440aaENSP00000394602.1
 
Nonsense mediated decay
F2Z3E6 -TSL:2
ENST00000453310.5RBM39-219106840aaENSP00000397443.1
 
Nonsense mediated decay
F2Z3E6 -TSL:2
ENST00000412738.5RBM39-207101840aaENSP00000397917.1
 
Nonsense mediated decay
F2Z3E6 -TSL:3
ENST00000490484.7RBM39-236871245aaENSP00000489005.1
 
Nonsense mediated decay
A0A0U1RQH7 -TSL:5CDS 5' incomplete
ENST00000476806.5RBM39-23075459aaENSP00000483837.1
 
Nonsense mediated decay
A0A087X122 -TSL:5CDS 5' incomplete
ENST00000615771.5RBM39-244686163aaENSP00000489196.1
 
Nonsense mediated decay
A0A0U1RQW2 -TSL:5CDS 5' incomplete
ENST00000433027.5RBM39-21361139aaENSP00000407466.1
 
Nonsense mediated decay
F8WF24 -TSL:5
ENST00000416529.5RBM39-20959462aaENSP00000407150.1
 
Nonsense mediated decay
F8WF73 -TSL:3
ENST00000416108.5RBM39-20857740aaENSP00000406900.1
 
Nonsense mediated decay
F2Z3E6 -TSL:4
ENST00000425184.5RBM39-21052623aaENSP00000389459.1
 
Nonsense mediated decay
H7BZG3 -TSL:3CDS 5' incomplete
ENST00000455343.5RBM39-22044140aaENSP00000395563.1
 
Nonsense mediated decay
F2Z3E6 -TSL:5
ENST00000449489.5RBM39-21843240aaENSP00000390303.1
 
Nonsense mediated decay
F2Z3E6 -TSL:5
ENST00000665058.1RBM39-2471983No protein-
 
Protein coding CDS not defined
---
ENST00000463098.5RBM39-224869No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000494274.5RBM39-239704No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000442447.5RBM39-215644No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000498280.1RBM39-242444No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000470563.5RBM39-227384No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000487604.1RBM39-234370No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000639702.1RBM39-2455914No protein-
 
Retained intron
--TSL:5
ENST00000463004.5RBM39-2234580No protein-
 
Retained intron
--TSL:5
ENST00000461283.5RBM39-2212415No protein-
 
Retained intron
--TSL:5
ENST00000492779.5RBM39-2372316No protein-
 
Retained intron
--TSL:2
ENST00000482563.1RBM39-2331737No protein-
 
Retained intron
--TSL:2
ENST00000477334.1RBM39-231949No protein-
 
Retained intron
--TSL:2
ENST00000461849.1RBM39-222861No protein-
 
Retained intron
--TSL:2
ENST00000465158.5RBM39-225825No protein-
 
Retained intron
--TSL:2
ENST00000495293.5RBM39-240759No protein-
 
Retained intron
--TSL:2
ENST00000481037.5RBM39-232687No protein-
 
Retained intron
--TSL:3
ENST00000496183.5RBM39-241632No protein-
 
Retained intron
--TSL:2
ENST00000493853.1RBM39-238567No protein-
 
Retained intron
--TSL:4
ENST00000475651.5RBM39-229555No protein-
 
Retained intron
--TSL:5
ENST00000471635.5RBM39-228549No protein-
 
Retained intron
--TSL:2
ENST00000468086.1RBM39-226549No protein-
 
Retained intron
--TSL:4
ENST00000490354.5RBM39-235436No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 6, Coding exons: 0, Transcript length: 759 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000495293.5

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.