Human (GRCh38.p14)
Description

spectrin repeat containing nuclear envelope protein 1 [Source:HGNC Symbol;Acc:HGNC:17089]

Gene Synonyms

8B, ARCA1, C6ORF98, CPG2, DJ45H2.2, ENAPTIN, KIAA0796, MYNE1, NESP1, NESPRIN-1, SCAR8, SYNE-1B

About this transcript

This transcript has 8 exons, is associated with 5786 variant alleles and maps to 196 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000367255.10SYNE1-206277088797aaENSP00000356224.5
 
Protein coding
CCDS5236Q8NF91-1 NM_182961.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000423061.6SYNE1-211274758749aaENSP00000396024.1
 
Protein coding
A0A0C4DG40 -GENCODE basicTSL:1
ENST00000367248.7SYNE1-20371651433aaENSP00000356217.3
 
Protein coding
F5GXQ8 -GENCODE basicTSL:5
ENST00000672122.1SYNE1-24166601424aaENSP00000500559.1
 
Protein coding
A0A5F9ZHR3 -GENCODE basic
ENST00000367251.7SYNE1-20458371654aaENSP00000356220.3
 
Protein coding
H0Y325 -TSL:1CDS 5' incomplete
ENST00000367253.8SYNE1-20551891725aaENSP00000356222.4
 
Protein coding
Q8NF91-6 -GENCODE basicTSL:5
ENST00000367257.8SYNE1-20850221355aaENSP00000356226.4
 
Protein coding
H0Y326 -TSL:5CDS 5' incomplete
ENST00000413186.6SYNE1-21048601443aaENSP00000414510.2
 
Protein coding
Q8NF91-5 -GENCODE basicTSL:5
ENST00000673281.1SYNE1-24647701528aaENSP00000500893.1
 
Protein coding
A0A5F9ZI52 -CDS 3' incomplete
ENST00000354674.5SYNE1-2023785975aaENSP00000346701.4
 
Protein coding
CCDS87458F8WAI0 NM_001347702.2MANE Plus ClinicalGENCODE basicTSL:5
ENST00000671915.1SYNE1-2403779542aaENSP00000500319.1
 
Protein coding
A0A5F9ZHI3 -CDS 5' incomplete
ENST00000539504.5SYNE1-2363768952aaENSP00000441052.1
 
Protein coding
Q5JV20 -GENCODE basicTSL:5
ENST00000536990.5SYNE1-2333003911aaENSP00000516090.1
 
Protein coding
CCDS94022B7Z9Y6 -GENCODE basicTSL:2
ENST00000537750.5SYNE1-2352850615aaENSP00000441264.1
 
Protein coding
F5GYQ7 -TSL:5CDS 3' incomplete
ENST00000535896.7SYNE1-2322802752aaENSP00000500235.1
 
Protein coding
A0A5F9ZHD7 -GENCODE basicTSL:5
ENST00000672169.1SYNE1-2432789635aaENSP00000500287.1
 
Protein coding
A0A5F9ZHE1 -CDS 5' incomplete
ENST00000610489.2SYNE1-2392688494aaENSP00000481873.2
 
Protein coding
I6XKI8 -GENCODE basicTSL:5
ENST00000673173.1SYNE1-2452663591aaENSP00000500180.1
 
Protein coding
A0A5F9ZHB2 -CDS 5' incomplete
ENST00000466159.6SYNE1-2162610754aaENSP00000446021.1
 
Protein coding
F5H4Q0 -GENCODE basicTSL:1
ENST00000672154.1SYNE1-2422350510aaENSP00000500128.1
 
Protein coding
A0A5F9ZH86 -CDS 5' incomplete
ENST00000495090.6SYNE1-2291907612aaENSP00000438508.1
 
Protein coding
F5H422 -GENCODE basicTSL:1
ENST00000454018.7SYNE1-2131549511aaENSP00000390858.4
 
Protein coding
A0A0C4DH48 -TSL:1CDS 5' incomplete
ENST00000540663.5SYNE1-237776242aaENSP00000437411.1
 
Protein coding
F5H6R8 -TSL:4CDS 3' incomplete
ENST00000537033.1SYNE1-234647195aaENSP00000443879.1
 
Protein coding
F5GZ83 -TSL:4CDS 3' incomplete
ENST00000469439.1SYNE1-218630207aaENSP00000442805.1
 
Protein coding
H0YGD3 -TSL:3CDS 5' incomplete
ENST00000673163.1SYNE1-244552836aaENSP00000499934.1
 
Nonsense mediated decay
A0A5F9ZH00 --
ENST00000673451.1SYNE1-2472851542aaENSP00000500189.1
 
Nonsense mediated decay
A0A5F9ZH87 -CDS 5' incomplete
ENST00000474655.6SYNE1-221179862aaENSP00000440193.1
 
Nonsense mediated decay
H0YFT4 -TSL:1CDS 5' incomplete
ENST00000347037.9SYNE1-2013798No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000460912.6SYNE1-2143664No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000481502.5SYNE1-224585No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000476519.1SYNE1-222582No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000498751.1SYNE1-230578No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000367256.9SYNE1-20710742No protein-
 
Retained intron
--TSL:1
ENST00000409694.6SYNE1-20910634No protein-
 
Retained intron
--TSL:1
ENST00000461872.6SYNE1-21510075No protein-
 
Retained intron
--TSL:1
ENST00000478916.5SYNE1-2237780No protein-
 
Retained intron
--TSL:2
ENST00000471834.1SYNE1-2197229No protein-
 
Retained intron
--TSL:1
ENST00000490135.6SYNE1-2275707No protein-
 
Retained intron
--TSL:1
ENST00000489156.1SYNE1-2261891No protein-
 
Retained intron
--TSL:1
ENST00000684643.1SYNE1-2511629No protein-
 
Retained intron
---
ENST00000682252.1SYNE1-2491540No protein-
 
Retained intron
---
ENST00000684208.1SYNE1-2501540No protein-
 
Retained intron
---
ENST00000448038.3SYNE1-2121275No protein-
 
Retained intron
--TSL:5
ENST00000682179.1SYNE1-248868No protein-
 
Retained intron
---
ENST00000468937.2SYNE1-217688No protein-
 
Retained intron
--TSL:2
ENST00000490866.2SYNE1-228581No protein-
 
Retained intron
--TSL:2
ENST00000535081.1SYNE1-231561No protein-
 
Retained intron
--TSL:2
ENST00000545694.1SYNE1-238526No protein-
 
Retained intron
--TSL:3
ENST00000472563.2SYNE1-220525No protein-
 
Retained intron
--TSL:2
ENST00000488376.2SYNE1-225414No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 8, Coding exons: 0, Transcript length: 1,629 bps,

Version

ENST00000684643.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.