Human (GRCh38.p14)
Description

low density lipoprotein receptor [Source:HGNC Symbol;Acc:HGNC:6547]

Gene Synonyms

LDLCQ2

Location
About this transcript

This transcript has 17 exons, is annotated with 88 domains and features, is associated with 24519 variant alleles and maps to 469 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000558518.6LDLR-2085173860aaENSP00000454071.1
 
Protein coding
CCDS12254P01130-1 NM_000527.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000252444.10LDLR-2015357946aaENSP00000252444.6
 
Protein coding
J3KMZ9 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000560467.2LDLR-2125048820aaENSP00000453513.2
 
Protein coding
H0YM92 -GENCODE basicTSL:3
ENST00000558013.5LDLR-2073144858aaENSP00000453346.1
 
Protein coding
CCDS58651P01130-5 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000557933.5LDLR-2052941948aaENSP00000453557.1
 
Protein coding
H0YMD1 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000535915.5LDLR-2032768819aaENSP00000440520.1
 
Protein coding
CCDS56085P01130-4 -GENCODE basicTSL:2
ENST00000545707.5LDLR-2042429682aaENSP00000437639.1
 
Protein coding
CCDS56083P01130-2 -GENCODE basicTSL:2
ENST00000455727.6LDLR-2022333692aaENSP00000397829.2
 
Protein coding
CCDS56084P01130-3 -GENCODE basicTSL:2
ENST00000559340.2LDLR-2105054596aaENSP00000453696.2
 
Nonsense mediated decay
H0YMQ3 -TSL:5
ENST00000560628.1LDLR-214535No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000557958.1LDLR-2061881No protein-
 
Retained intron
--TSL:2
ENST00000560502.5LDLR-213509No protein-
 
Retained intron
--TSL:2
ENST00000558528.1LDLR-209456No protein-
 
Retained intron
--TSL:2
ENST00000560173.1LDLR-211389No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,768 bps, Translation length: 819 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P01130

CCDS

This transcript is a member of the Human CCDS set: CCDS56085

Transcript Support Level (TSL)

TSL:2

Version

ENST00000535915.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.