Human (GRCh38.p14)
Description

CLN6 transmembrane ER protein [Source:HGNC Symbol;Acc:HGNC:2077]

Gene Synonyms

FLJ20561, HST18960, NCLF

Location
About this transcript

This transcript has 3 exons, is annotated with 1 domain and feature, is associated with 16670 variant alleles and maps to 50 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000249806.11CLN6-2012228311aaENSP00000249806.5
 
Protein coding
CCDS10227Q9NWW5-1 NM_017882.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000538696.5CLN6-2021343343aaENSP00000445770.1
 
Protein coding
CCDS92032Q9NWW5-2 -GENCODE basicTSL:2
ENST00000565471.6CLN6-2061075158aaENSP00000457384.1
 
Protein coding
H3BTY4 -GENCODE basicTSL:2
ENST00000566347.5CLN6-207981248aaENSP00000457783.1
 
Protein coding
H3BUT1 -GENCODE basicTSL:1
ENST00000564752.1CLN6-204900213aaENSP00000457822.1
 
Protein coding
H3BUV4 -GENCODE basicTSL:3
ENST00000637667.1CLN6-222874251aaENSP00000489843.1
 
Protein coding
A0A1B0GTU6 -TSL:1CDS 3' incomplete
ENST00000637494.1CLN6-221765215aaENSP00000490057.1
 
Protein coding
A0A1B0GUD2 -GENCODE basicTSL:5
ENST00000636314.1CLN6-214442103aaENSP00000490295.1
 
Protein coding
A0A1B0GUY3 -GENCODE basicTSL:3
ENST00000638076.1CLN6-2242323171aaENSP00000490373.1
 
Nonsense mediated decay
A0A0S2Z5D0 -TSL:1
ENST00000637329.1CLN6-219120486aaENSP00000489649.1
 
Nonsense mediated decay
A0A1B0GTD3 -TSL:5CDS 5' incomplete
ENST00000635747.1CLN6-210118161aaENSP00000490627.1
 
Nonsense mediated decay
A0A1B0GVR8 -TSL:5
ENST00000636212.1CLN6-2131053108aaENSP00000489851.1
 
Nonsense mediated decay
A0A1B0GTV3 -TSL:5
ENST00000567060.5CLN6-208945105aaENSP00000454818.1
 
Nonsense mediated decay
H3BNF1 -TSL:2
ENST00000637450.1CLN6-22086876aaENSP00000490204.1
 
Nonsense mediated decay
A0A1B0GUQ7 -TSL:3
ENST00000637823.1CLN6-22371776aaENSP00000490011.1
 
Nonsense mediated decay
A0A1B0GU90 -TSL:5CDS 5' incomplete
ENST00000636876.1CLN6-21665567aaENSP00000489950.1
 
Nonsense mediated decay
A0A1B0GU39 -TSL:5
ENST00000637223.1CLN6-21865261aaENSP00000490010.1
 
Nonsense mediated decay
A0A1B0GVR8 -TSL:5
ENST00000638144.1CLN6-225576No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000563917.2CLN6-203557No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000636964.1CLN6-2173335No protein-
 
Retained intron
--TSL:2
ENST00000636674.1CLN6-2152005No protein-
 
Retained intron
--TSL:5
ENST00000564846.1CLN6-2051762No protein-
 
Retained intron
--TSL:2
ENST00000635754.1CLN6-2111441No protein-
 
Retained intron
--TSL:NA
ENST00000636020.1CLN6-212894No protein-
 
Retained intron
--TSL:2
ENST00000569336.2CLN6-209557No protein-
 
Retained intron
--TSL:NA
Statistics

Exons: 3, Coding exons: 2, Transcript length: 655 bps, Translation length: 67 residues

Transcript Support Level (TSL)

TSL:5

Version

ENST00000636876.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.