Human (GRCh38.p14)
Description

sperm antigen with calponin homology and coiled-coil domains 1 [Source:HGNC Symbol;Acc:HGNC:30615]

Gene Synonyms

CYTSB, FLJ36955, HCMOGT-1, NSP

Location
About this transcript

This transcript has 13 exons, is annotated with 32 domains and features, is associated with 137723 variant alleles and maps to 448 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000395527.9SPECC1-20482551068aaENSP00000378898.4
 
Protein coding
CCDS32590Q5M775-1 NM_001243439.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:2
ENST00000395530.6SPECC1-2068133987aaENSP00000378901.2
 
Protein coding
CCDS42281Q5M775-4 -GENCODE basicAPPRIS P2TSL:1
ENST00000676570.1SPECC1-2215482790aaENSP00000503507.1
 
Protein coding
CCDS42280Q5M775-2 -GENCODE basic
ENST00000680374.1SPECC1-2405356790aaENSP00000505715.1
 
Protein coding
CCDS42280Q5M775-2 -GENCODE basic
ENST00000681593.1SPECC1-2495245790aaENSP00000504996.1
 
Protein coding
CCDS42280Q5M775-2 -GENCODE basic
ENST00000679049.1SPECC1-2315143790aaENSP00000503499.1
 
Protein coding
CCDS42280Q5M775-2 -GENCODE basic
ENST00000680572.1SPECC1-2415068790aaENSP00000505383.1
 
Protein coding
CCDS42280Q5M775-2 -GENCODE basic
ENST00000395529.7SPECC1-2054971790aaENSP00000378900.3
 
Protein coding
CCDS42280Q5M775-2 -GENCODE basicTSL:1
ENST00000681202.1SPECC1-2464561784aaENSP00000506319.1
 
Protein coding
CCDS92278A0A7P0TAS3 -GENCODE basic
ENST00000681116.1SPECC1-2454552784aaENSP00000505864.1
 
Protein coding
CCDS92278A0A7P0TAS3 -GENCODE basic
ENST00000680604.1SPECC1-2424378872aaENSP00000506044.1
 
Protein coding
A0A7P0Z4I1 -GENCODE basic
ENST00000679048.1SPECC1-23043161029aaENSP00000503774.1
 
Protein coding
CCDS92277A0A7I2YQJ3 -GENCODE basic
ENST00000678019.1SPECC1-22642841048aaENSP00000503509.1
 
Protein coding
CCDS92276A0A7I2V416 -GENCODE basic
ENST00000677148.1SPECC1-22342811009aaENSP00000503849.1
 
Protein coding
A0A7I2V451 -GENCODE basic
ENST00000680019.1SPECC1-23742771034aaENSP00000506699.1
 
Protein coding
CCDS92275A0A7P0TBP2 -GENCODE basic
ENST00000679255.1SPECC1-23342141068aaENSP00000504211.1
 
Protein coding
CCDS32590Q5M775-1 -GENCODE basicAPPRIS ALT2
ENST00000677914.1SPECC1-22540601068aaENSP00000503971.1
 
Protein coding
CCDS32590Q5M775-1 -GENCODE basicAPPRIS ALT2
ENST00000679058.1SPECC1-23240351068aaENSP00000502924.1
 
Protein coding
CCDS32590Q5M775-1 -GENCODE basicAPPRIS ALT2
ENST00000261503.9SPECC1-20139481068aaENSP00000261503.5
 
Protein coding
CCDS32590Q5M775-1 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000681875.1SPECC1-25139271029aaENSP00000505421.1
 
Protein coding
CCDS92277A0A7I2YQJ3 -GENCODE basic
ENST00000678321.1SPECC1-22837891050aaENSP00000503822.1
 
Protein coding
A0A7I2V486 -GENCODE basic
ENST00000681564.1SPECC1-24836511050aaENSP00000506710.1
 
Protein coding
A0A7I2V486 -GENCODE basic
ENST00000679801.1SPECC1-2353388873aaENSP00000506625.1
 
Protein coding
A0A7P0TB87 -GENCODE basic
ENST00000679740.1SPECC1-2343081130aaENSP00000505905.1
 
Protein coding
A0A7I2V5G2 -GENCODE basic
ENST00000395522.6SPECC1-2022982703aaENSP00000378893.2
 
Protein coding
CCDS58531Q5M775-5 -GENCODE basicTSL:1
ENST00000583463.6SPECC1-2172949783aaENSP00000464489.2
 
Protein coding
J3QS22 -TSL:4CDS 3' incomplete
ENST00000578321.2SPECC1-2102727783aaENSP00000462266.2
 
Protein coding
J3QS22 -TSL:4CDS 3' incomplete
ENST00000679819.1SPECC1-2362726124aaENSP00000506551.1
 
Protein coding
A0A7P0TBD3 -GENCODE basic
ENST00000581973.7SPECC1-2142718783aaENSP00000464341.3
 
Protein coding
J3QS22 -TSL:5CDS 3' incomplete
ENST00000583482.7SPECC1-2182618783aaENSP00000463006.3
 
Protein coding
J3QS22 -TSL:5CDS 3' incomplete
ENST00000580934.2SPECC1-2122592783aaENSP00000461944.2
 
Protein coding
J3QS22 -TSL:4CDS 3' incomplete
ENST00000583528.6SPECC1-2192575574aaENSP00000461918.2
 
Protein coding
CCDS92274J3KRB9 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000395525.7SPECC1-2032536709aaENSP00000378896.3
 
Protein coding
CCDS45628Q5M775-3 -GENCODE basicTSL:1
ENST00000581399.6SPECC1-2132251408aaENSP00000462471.2
 
Protein coding
CCDS92279J3KSG2 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000584527.1SPECC1-220940202aaENSP00000463799.1
 
Protein coding
J3QQM0 -GENCODE basicTSL:3
ENST00000582226.5SPECC1-216732167aaENSP00000462092.1
 
Protein coding
J3KRN9 -TSL:5CDS 5' incomplete
ENST00000472876.5SPECC1-208614130aaENSP00000504477.1
 
Protein coding
A0A7I2V5G2 -GENCODE basicTSL:3
ENST00000678315.1SPECC1-2276380834aaENSP00000504304.1
 
Nonsense mediated decay
A0A7I2V562 --
ENST00000680124.1SPECC1-2384202145aaENSP00000506187.1
 
Nonsense mediated decay
A0A7P0T8Y6 --
ENST00000680830.1SPECC1-2444061145aaENSP00000505376.1
 
Nonsense mediated decay
A0A7P0T8Y6 --
ENST00000680373.1SPECC1-2393754703aaENSP00000506254.1
 
Nonsense mediated decay
CCDS58531Q5M775-5 --
ENST00000681545.1SPECC1-2473599712aaENSP00000505652.1
 
Nonsense mediated decay
A0A7P0T9K0 --
ENST00000467722.3SPECC1-2072875106aaENSP00000463130.2
 
Nonsense mediated decay
J3QKL1 -TSL:2
ENST00000680740.1SPECC1-2432262106aaENSP00000505625.1
 
Nonsense mediated decay
J3QKL1 --
ENST00000678651.1SPECC1-2294149No protein-
 
Protein coding CDS not defined
---
ENST00000579688.2SPECC1-2113730No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000681731.1SPECC1-2502167No protein-
 
Protein coding CDS not defined
---
ENST00000582063.1SPECC1-215580No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000677784.1SPECC1-2243293No protein-
 
Retained intron
---
ENST00000676737.1SPECC1-2222366No protein-
 
Retained intron
---
ENST00000492188.1SPECC1-2091190No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 13, Coding exons: 12, Transcript length: 4,281 bps, Translation length: 1,009 residues

Version

ENST00000677148.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.