Human (GRCh38.p14)
Description

CCR4-NOT transcription complex subunit 1 [Source:HGNC Symbol;Acc:HGNC:7877]

Gene Synonyms

AD-005, CDC39, KIAA1007, NOT1, NOT1H

Location
About this transcript

This transcript has 4 exons, is associated with 15400 variant alleles and maps to 60 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000317147.10CNOT1-20184112376aaENSP00000320949.5
 
Protein coding
CCDS10799A5YKK6-1 NM_016284.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000569240.5CNOT1-21676602371aaENSP00000455635.1
 
Protein coding
CCDS58468A5YKK6-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000441024.6CNOT1-20249991551aaENSP00000413113.2
 
Protein coding
CCDS45501A5YKK6-4 -GENCODE basicTSL:1
ENST00000568917.1CNOT1-2141317439aaENSP00000454611.1
 
Protein coding
H3BMZ2 -TSL:5CDS 5' and 3' incomplete
ENST00000569882.1CNOT1-219831277aaENSP00000454377.1
 
Protein coding
H3BMH0 -TSL:3CDS 5' and 3' incomplete
ENST00000567285.1CNOT1-212722241aaENSP00000458057.1
 
Protein coding
H3BVC9 -TSL:4CDS 5' and 3' incomplete
ENST00000564557.1CNOT1-20658262aaENSP00000456975.1
 
Protein coding
H3BT18 -TSL:3CDS 3' incomplete
ENST00000562046.1CNOT1-203578193aaENSP00000456131.1
 
Protein coding
H3BR89 -TSL:5CDS 5' and 3' incomplete
ENST00000567133.1CNOT1-210553185aaENSP00000454763.1
 
Protein coding
H3BNB1 -TSL:5CDS 5' and 3' incomplete
ENST00000569020.5CNOT1-21553525aaENSP00000457869.1
 
Protein coding
H3BPF1 -TSL:4CDS 3' incomplete
ENST00000565697.1CNOT1-20838525aaENSP00000455289.1
 
Protein coding
H3BPF1 -TSL:3CDS 3' incomplete
ENST00000567188.5CNOT1-21178302150aaENSP00000456649.1
 
Nonsense mediated decay
A5YKK6-3 -TSL:1
ENST00000565605.5CNOT1-20773996aaENSP00000457460.1
 
Nonsense mediated decay
H3BU44 -TSL:4
ENST00000566240.1CNOT1-20956768aaENSP00000457173.1
 
Nonsense mediated decay
H3BTH2 -TSL:4CDS 5' incomplete
ENST00000569732.1CNOT1-218906No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000568158.1CNOT1-213496No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000569263.1CNOT1-217304No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000563130.5CNOT1-2042280No protein-
 
Retained intron
--TSL:2
ENST00000569916.1CNOT1-220599No protein-
 
Retained intron
--TSL:3
ENST00000563283.1CNOT1-205551No protein-
 
Retained intron
--TSL:3
ENST00000569924.1CNOT1-221493No protein-
 
Retained intron
--TSL:2
ENST00000570139.1CNOT1-222458No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 4, Coding exons: 0, Transcript length: 496 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000568158.1

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.