Human (GRCh38.p14)
Description

DExD-box helicase 39A [Source:HGNC Symbol;Acc:HGNC:17821]

Gene Synonyms

BAT1L, DDX39, DDXL, URH49

Location
About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 5451 variant alleles and maps to 495 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000242776.9DDX39A-2011498427aaENSP00000242776.3
 
Protein coding
CCDS12308O00148-1 NM_005804.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000454233.6DDX39A-203922267aaENSP00000392929.2
 
Protein coding
O00148-3 -GENCODE basicTSL:3
ENST00000589675.5DDX39A-210829255aaENSP00000467911.1
 
Protein coding
K7EQN7 -TSL:3CDS 3' incomplete
ENST00000586993.5DDX39A-205585125aaENSP00000464801.1
 
Protein coding
K7EIL8 -TSL:4CDS 3' incomplete
ENST00000590315.5DDX39A-213566189aaENSP00000467411.1
 
Protein coding
K7EPJ3 -TSL:5CDS 5' and 3' incomplete
ENST00000590239.5DDX39A-211565130aaENSP00000466810.1
 
Protein coding
K7EN69 -TSL:4CDS 3' incomplete
ENST00000590696.1DDX39A-21556392aaENSP00000467040.1
 
Protein coding
K7ENP6 -TSL:4CDS 3' incomplete
ENST00000591275.5DDX39A-216484108aaENSP00000465926.1
 
Protein coding
K7EL56 -TSL:2CDS 3' incomplete
ENST00000588692.5DDX39A-2081478267aaENSP00000467862.1
 
Nonsense mediated decay
O00148-3 -TSL:5
ENST00000324340.13DDX39A-2021355322aaENSP00000322749.8
 
Nonsense mediated decay
O00148-2 -TSL:1
ENST00000592927.5DDX39A-21982396aaENSP00000485838.1
 
Nonsense mediated decay
A0A0D9SEM9 -TSL:3CDS 5' incomplete
ENST00000593008.1DDX39A-220538No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000589318.5DDX39A-2091903No protein-
 
Retained intron
--TSL:1
ENST00000587730.5DDX39A-2061813No protein-
 
Retained intron
--TSL:1
ENST00000588542.5DDX39A-2071297No protein-
 
Retained intron
--TSL:3
ENST00000586558.5DDX39A-2041127No protein-
 
Retained intron
--TSL:2
ENST00000592391.5DDX39A-2171080No protein-
 
Retained intron
--TSL:5
ENST00000590260.5DDX39A-212988No protein-
 
Retained intron
--TSL:2
ENST00000593026.1DDX39A-221657No protein-
 
Retained intron
--TSL:3
ENST00000592632.5DDX39A-218586No protein-
 
Retained intron
--TSL:2
ENST00000590556.1DDX39A-214575No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 11, Coding exons: 10, Transcript length: 1,498 bps, Translation length: 427 residues

MANE

This MANE Select transcript contains ENSP00000242776 and matches to NM_005804.4 and NP_005795.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00148

CCDS

This transcript is a member of the Human CCDS set: CCDS12308

Transcript Support Level (TSL)

TSL:1

Version

ENST00000242776.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.