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Description

cysteine sulfinic acid decarboxylase [Source:MGI Symbol;Acc:MGI:2180098]

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Csad-201ENSMUST00000023805.32279493aaENSMUSP00000023805.2
 
Protein coding
CCDS27873Q9DBE0 GENCODE basicAPPRIS P1TSL:1
Csad-211ENSMUST00000230288.21786463aaENSMUSP00000155492.2
 
Protein coding
-A0A2R8VHX0 GENCODE basic
Csad-202ENSMUST00000229043.21061189aaENSMUSP00000155509.2
 
Protein coding
-A0A2R8VHW7 CDS 3' incomplete
Csad-222ENSMUST00000231030.2888150aaENSMUSP00000155394.2
 
Protein coding
-A0A2R8VI50 CDS 3' incomplete
Csad-218ENSMUST00000230687.2825210aaENSMUSP00000155153.2
 
Protein coding
-A0A2R8VHJ2 CDS 3' incomplete
Csad-206ENSMUST00000229514.2813162aaENSMUSP00000155067.2
 
Protein coding
-A0A2R8VHG5 CDS 3' incomplete
Csad-216ENSMUST00000230656.2794119aaENSMUSP00000155633.2
 
Protein coding
-A0A2R8VI19 CDS 3' incomplete
Csad-207ENSMUST00000229770.264535aaENSMUSP00000155075.2
 
Protein coding
-A0A2R8VHG9 CDS 3' incomplete
Csad-221ENSMUST00000231029.2623107aaENSMUSP00000155282.2
 
Protein coding
-A0A2R8VHN7 CDS 5' incomplete
Csad-205ENSMUST00000229470.2581150aaENSMUSP00000155756.2
 
Protein coding
-A0A2R8VI50 CDS 3' incomplete
Csad-203ENSMUST00000229252.232369aaENSMUSP00000154991.2
 
Protein coding
-A0A2R8VHD3 CDS 3' incomplete
Csad-204ENSMUST00000229345.232164aaENSMUSP00000155560.2
 
Protein coding
-A0A2R8W6X8 CDS 3' incomplete
Csad-212ENSMUST00000230322.21391174aaENSMUSP00000155715.2
 
Nonsense mediated decay
-A0A2R8VI48 -
Csad-223ENSMUST00000231048.21309232aaENSMUSP00000155192.2
 
Nonsense mediated decay
-A0A2R8VK32 -
Csad-219ENSMUST00000230708.2772135aaENSMUSP00000155265.2
 
Nonsense mediated decay
-A0A2R8VK60 CDS 5' incomplete
Csad-208ENSMUST00000229938.249545aaENSMUSP00000155645.2
 
Nonsense mediated decay
-A0A2R8VI21 -
Csad-214ENSMUST00000230342.246560aaENSMUSP00000155558.2
 
Nonsense mediated decay
-A0A2R8VHX6 CDS 5' incomplete
Csad-213ENSMUST00000230328.2691No protein-
 
Processed transcript
---
Csad-209ENSMUST00000230008.2492No protein-
 
Processed transcript
---
Csad-220ENSMUST00000230895.2421No protein-
 
Processed transcript
---
Csad-217ENSMUST00000230665.2346No protein-
 
Processed transcript
---
Csad-215ENSMUST00000230644.2342No protein-
 
Processed transcript
---
Csad-210ENSMUST00000230253.2593No protein-
 
Retained intron
---
Description

G-protein signalling modulator 1 (AGS3-like, C. elegans) [Source:MGI Symbol;Acc:MGI:1915089]

Gene Synonyms

1810037C22Rik, Ags3

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Gpsm1-201ENSMUST00000066889.133432705aaENSMUSP00000067964.7
 
Protein coding
CCDS57159Q6IR34-5 GENCODE basicTSL:1
Gpsm1-202ENSMUST00000066936.93384673aaENSMUSP00000065000.3
 
Protein coding
CCDS15800Q6IR34-1 GENCODE basicAPPRIS P1TSL:1
Gpsm1-203ENSMUST00000078616.123127613aaENSMUSP00000077686.6
 
Protein coding
CCDS57158Q6IR34-2 GENCODE basicTSL:1
Gpsm1-210ENSMUST00000145884.82717497aaENSMUSP00000115680.2
 
Protein coding
-F6SX81 TSL:1CDS 5' incomplete
Gpsm1-204ENSMUST00000114134.92043236aaENSMUSP00000109769.3
 
Protein coding
-A2AIV3 GENCODE basicTSL:3
Gpsm1-206ENSMUST00000127453.233088aaENSMUSP00000120934.2
 
Protein coding
-A2AIV4 TSL:3CDS 3' incomplete
Gpsm1-211ENSMUST00000147873.8977No protein-
 
Processed transcript
--TSL:1
Gpsm1-209ENSMUST00000142057.2834No protein-
 
Processed transcript
--TSL:2
Gpsm1-205ENSMUST00000123981.8794No protein-
 
Processed transcript
--TSL:2
Gpsm1-212ENSMUST00000152895.8720No protein-
 
Processed transcript
--TSL:2
Gpsm1-213ENSMUST00000153064.2698No protein-
 
Processed transcript
--TSL:3
Gpsm1-208ENSMUST00000132638.2664No protein-
 
Processed transcript
--TSL:1
Gpsm1-207ENSMUST00000132276.2382No protein-
 
Processed transcript
--TSL:3
Description

non-homologous end joining factor [Source:MGI Symbol;Acc:MGI:2442831]

Gene Synonyms

BC029214, D930050G13Rik, paralog of XRCC4 and XLF

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Paxx-201ENSMUST00000114261.9981205aaENSMUSP00000109899.3
 
Protein coding
CCDS15775Q8K0Y7 GENCODE basicAPPRIS P1TSL:1
Paxx-213ENSMUST00000151239.2592157aaENSMUSP00000120533.2
 
Protein coding
-A2AJ30 TSL:3CDS 3' incomplete
Paxx-209ENSMUST00000133919.81254No protein-
 
Processed transcript
--TSL:1
Paxx-203ENSMUST00000124172.21245No protein-
 
Processed transcript
--TSL:3
Paxx-204ENSMUST00000125710.8917No protein-
 
Processed transcript
--TSL:3
Paxx-210ENSMUST00000135915.8896No protein-
 
Processed transcript
--TSL:3
Paxx-211ENSMUST00000138079.8765No protein-
 
Processed transcript
--TSL:2
Paxx-206ENSMUST00000130130.8744No protein-
 
Processed transcript
--TSL:3
Paxx-207ENSMUST00000132561.8610No protein-
 
Processed transcript
--TSL:2
Paxx-208ENSMUST00000132596.8608No protein-
 
Processed transcript
--TSL:5
Paxx-212ENSMUST00000141613.8554No protein-
 
Processed transcript
--TSL:5
Paxx-202ENSMUST00000123986.2532No protein-
 
Processed transcript
--TSL:5
Paxx-205ENSMUST00000128560.2521No protein-
 
Processed transcript
--TSL:2
Description

long intergenic non-protein coding RNA 511 [Source:HGNC Symbol;Acc:HGNC:43564]

Gene Synonyms

onco-lncRNA-12

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
LINC00511-279ENST00000650033.13766No protein-
 
Retained intron
---
LINC00511-278ENST00000650016.1508No protein-
 
Retained intron
---
LINC00511-244ENST00000648631.12929No protein-
 
lncRNA
--Ensembl CanonicalGENCODE basic
LINC00511-220ENST00000647652.13700No protein-
 
lncRNA
--GENCODE basic
LINC00511-215ENST00000582712.22586No protein-
 
lncRNA
--GENCODE basicTSL:3
LINC00511-221ENST00000647706.22532No protein-
 
lncRNA
---
LINC00511-261ENST00000649350.12527No protein-
 
lncRNA
---
LINC00511-243ENST00000648623.22522No protein-
 
lncRNA
---
LINC00511-225ENST00000647953.12292No protein-
 
lncRNA
--GENCODE basic
LINC00511-283ENST00000650131.22282No protein-
 
lncRNA
---
LINC00511-213ENST00000581549.22266No protein-
 
lncRNA
--GENCODE basicTSL:2
LINC00511-235ENST00000648401.12214No protein-
 
lncRNA
--GENCODE basic
LINC00511-274ENST00000649793.22208No protein-
 
lncRNA
---
LINC00511-280ENST00000650051.12207No protein-
 
lncRNA
---
LINC00511-289ENST00000650212.12174No protein-
 
lncRNA
--GENCODE basic
LINC00511-276ENST00000649881.12078No protein-
 
lncRNA
---
LINC00511-294ENST00000650371.12061No protein-
 
lncRNA
---
LINC00511-272ENST00000649647.12060No protein-
 
lncRNA
---
LINC00511-302ENST00000650550.22041No protein-
 
lncRNA
--GENCODE basic
LINC00511-262ENST00000649366.12028No protein-
 
lncRNA
---
LINC00511-292ENST00000650313.11995No protein-
 
lncRNA
--GENCODE basic
LINC00511-255ENST00000649250.11978No protein-
 
lncRNA
---
LINC00511-224ENST00000647871.21958No protein-
 
lncRNA
--GENCODE basic
LINC00511-252ENST00000649074.11905No protein-
 
lncRNA
--GENCODE basic
LINC00511-249ENST00000648952.11893No protein-
 
lncRNA
---
LINC00511-299ENST00000650483.11888No protein-
 
lncRNA
---
LINC00511-240ENST00000648520.11888No protein-
 
lncRNA
--GENCODE basic
LINC00511-237ENST00000648411.11843No protein-
 
lncRNA
--GENCODE basic
LINC00511-264ENST00000649433.11836No protein-
 
lncRNA
--GENCODE basic
LINC00511-234ENST00000648297.11823No protein-
 
lncRNA
---
LINC00511-257ENST00000649311.11815No protein-
 
lncRNA
---
LINC00511-253ENST00000649172.11788No protein-
 
lncRNA
---
LINC00511-216ENST00000583460.21778No protein-
 
lncRNA
--GENCODE basicTSL:5
LINC00511-275ENST00000649833.11772No protein-
 
lncRNA
---
LINC00511-245ENST00000648667.11751No protein-
 
lncRNA
--GENCODE basic
LINC00511-273ENST00000649733.11742No protein-
 
lncRNA
---
LINC00511-205ENST00000578206.21732No protein-
 
lncRNA
--TSL:3
LINC00511-201ENST00000453722.61716No protein-
 
lncRNA
--TSL:2
LINC00511-227ENST00000648069.11713No protein-
 
lncRNA
--GENCODE basic
LINC00511-218ENST00000647593.11690No protein-
 
lncRNA
---
LINC00511-266ENST00000649489.11682No protein-
 
lncRNA
---
LINC00511-230ENST00000648176.21647No protein-
 
lncRNA
---
LINC00511-202ENST00000457958.71626No protein-
 
lncRNA
--TSL:1
LINC00511-236ENST00000648403.11556No protein-
 
lncRNA
--GENCODE basic
LINC00511-260ENST00000649343.11552No protein-
 
lncRNA
---
LINC00511-306ENST00000650602.21510No protein-
 
lncRNA
--GENCODE basic
LINC00511-233ENST00000648248.11468No protein-
 
lncRNA
---
LINC00511-296ENST00000650423.11455No protein-
 
lncRNA
---
LINC00511-241ENST00000648522.11351No protein-
 
lncRNA
---
LINC00511-281ENST00000650083.11329No protein-
 
lncRNA
---
LINC00511-229ENST00000648104.21264No protein-
 
lncRNA
---
LINC00511-270ENST00000649597.11206No protein-
 
lncRNA
---
LINC00511-298ENST00000650482.11202No protein-
 
lncRNA
---
LINC00511-265ENST00000649440.21159No protein-
 
lncRNA
---
LINC00511-290ENST00000650227.11126No protein-
 
lncRNA
---
LINC00511-271ENST00000649614.11098No protein-
 
lncRNA
---
LINC00511-267ENST00000649532.11045No protein-
 
lncRNA
---
LINC00511-263ENST00000649407.11045No protein-
 
lncRNA
---
LINC00511-226ENST00000648054.11027No protein-
 
lncRNA
---
LINC00511-288ENST00000650211.1977No protein-
 
lncRNA
---
LINC00511-286ENST00000650191.1951No protein-
 
lncRNA
---
LINC00511-254ENST00000649197.1937No protein-
 
lncRNA
--GENCODE basic
LINC00511-291ENST00000650289.2862No protein-
 
lncRNA
---
LINC00511-212ENST00000581183.3860No protein-
 
lncRNA
--TSL:3
LINC00511-295ENST00000650419.1853No protein-
 
lncRNA
---
LINC00511-246ENST00000648672.2841No protein-
 
lncRNA
---
LINC00511-297ENST00000650476.1826No protein-
 
lncRNA
---
LINC00511-268ENST00000649553.1819No protein-
 
lncRNA
---
LINC00511-277ENST00000649936.1796No protein-
 
lncRNA
---
LINC00511-284ENST00000650161.1791No protein-
 
lncRNA
---
LINC00511-256ENST00000649269.1789No protein-
 
lncRNA
---
LINC00511-238ENST00000648428.1780No protein-
 
lncRNA
---
LINC00511-219ENST00000647611.1762No protein-
 
lncRNA
---
LINC00511-287ENST00000650194.2762No protein-
 
lncRNA
---
LINC00511-214ENST00000581801.6749No protein-
 
lncRNA
--TSL:3
LINC00511-231ENST00000648203.1746No protein-
 
lncRNA
---
LINC00511-248ENST00000648907.1736No protein-
 
lncRNA
---
LINC00511-210ENST00000580861.2701No protein-
 
lncRNA
--GENCODE basicTSL:4
LINC00511-301ENST00000650510.1692No protein-
 
lncRNA
---
LINC00511-285ENST00000650180.1691No protein-
 
lncRNA
---
LINC00511-250ENST00000648954.1689No protein-
 
lncRNA
---
LINC00511-208ENST00000580199.7678No protein-
 
lncRNA
--TSL:3
LINC00511-228ENST00000648088.1669No protein-
 
lncRNA
---
LINC00511-232ENST00000648220.1668No protein-
 
lncRNA
---
LINC00511-204ENST00000577828.6656No protein-
 
lncRNA
--TSL:3
LINC00511-304ENST00000650570.1617No protein-
 
lncRNA
---
LINC00511-209ENST00000580500.5561No protein-
 
lncRNA
--TSL:4
LINC00511-203ENST00000577773.2532No protein-
 
lncRNA
--GENCODE basicTSL:3
LINC00511-303ENST00000650554.1514No protein-
 
lncRNA
---
LINC00511-259ENST00000649332.1509No protein-
 
lncRNA
---
LINC00511-247ENST00000648840.1502No protein-
 
lncRNA
---
LINC00511-222ENST00000647735.1496No protein-
 
lncRNA
--GENCODE basic
LINC00511-211ENST00000580948.1475No protein-
 
lncRNA
--TSL:3
LINC00511-269ENST00000649595.2471No protein-
 
lncRNA
---
LINC00511-206ENST00000579631.2448No protein-
 
lncRNA
--TSL:2
LINC00511-293ENST00000650357.1325No protein-
 
lncRNA
---
LINC00511-251ENST00000649013.1266No protein-
 
lncRNA
---
LINC00511-242ENST00000648559.1261No protein-
 
lncRNA
---
LINC00511-300ENST00000650499.1231No protein-
 
lncRNA
---
LINC00511-258ENST00000649330.1230No protein-
 
lncRNA
---
LINC00511-239ENST00000648500.1219No protein-
 
lncRNA
---
LINC00511-207ENST00000580175.2208No protein-
 
lncRNA
--TSL:3
LINC00511-217ENST00000584749.2173No protein-
 
lncRNA
--TSL:3
LINC00511-305ENST00000650600.1117No protein-
 
lncRNA
---
LINC00511-223ENST00000647850.1111No protein-
 
lncRNA
---
LINC00511-282ENST00000650121.1108No protein-
 
lncRNA
---
Description

Fc fragment of IgA receptor [Source:HGNC Symbol;Acc:HGNC:3608]

Gene Synonyms

CD89

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
FCAR-306ENST00000614226.41483287aaENSP00000483099.1
 
Protein coding
-P24071-1 -Ensembl CanonicalGENCODE basicTSL:1
FCAR-309ENST00000615800.41432239aaENSP00000483841.1
 
Protein coding
-P24071-4 -GENCODE basicTSL:1
FCAR-307ENST00000614433.4830265aaENSP00000480748.1
 
Protein coding
-P24071-2 -GENCODE basicTSL:1
FCAR-312ENST00000618328.4828275aaENSP00000480496.1
 
Protein coding
-P24071-10 -GENCODE basicTSL:1
FCAR-313ENST00000620270.4762253aaENSP00000482022.1
 
Protein coding
-P24071-11 -GENCODE basicTSL:1
FCAR-304ENST00000612505.4754209aaENSP00000479792.1
 
Protein coding
-P24071-8 -GENCODE basicTSL:1
FCAR-303ENST00000612159.4609179aaENSP00000484662.1
 
Protein coding
-P24071-9 -GENCODE basicTSL:1
FCAR-310ENST00000617025.4608191aaENSP00000481129.1
 
Protein coding
-P24071-3 -GENCODE basicTSL:1
FCAR-311ENST00000618271.1537178aaENSP00000484741.1
 
Protein coding
-P24071-7 -GENCODE basicTSL:1
FCAR-314ENST00000620397.41063227aaENSP00000477584.1
 
Nonsense mediated decay
-P24071-5 -TSL:1
FCAR-308ENST00000615109.1876No protein-
 
Processed transcript
---TSL:1
FCAR-315ENST00000620956.4654No protein-
 
Processed transcript
---TSL:1
FCAR-305ENST00000614202.4628No protein-
 
Processed transcript
---TSL:1
Description

coiled-coil domain containing 88A [Source:HGNC Symbol;Acc:HGNC:25523]

Gene Synonyms

APE, FLJ10392, GIV, GRDN, HkRP1, KIAA1212

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
CCDC88A-207ENST00000436346.797511871aaENSP00000410608.1
 
Protein coding
-Q3V6T2-1 NM_001365480.1MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT1TSL:5
CCDC88A-201ENST00000263630.1396991843aaENSP00000263630.8
 
Protein coding
CCDS33203Q3V6T2-2 -GENCODE basicAPPRIS P4TSL:1
CCDC88A-202ENST00000336838.1095051870aaENSP00000338728.6
 
Protein coding
CCDS46288Q3V6T2-3 -GENCODE basicAPPRIS ALT1TSL:1
CCDC88A-260ENST00000646796.163781796aaENSP00000493703.1
 
Protein coding
CCDS58710Q3V6T2-5 -GENCODE basicAPPRIS ALT2
CCDC88A-204ENST00000413716.795451797aaENSP00000404431.3
 
Protein coding
-A0A2U3TZV9 -GENCODE basicAPPRIS ALT2TSL:1
CCDC88A-226ENST00000643413.188811842aaENSP00000494811.1
 
Protein coding
-Q3V6T2-4 -GENCODE basicAPPRIS ALT1
CCDC88A-266ENST00000647401.186471604aaENSP00000496148.1
 
Protein coding
-A0A2R8Y7B1 -GENCODE basic
CCDC88A-215ENST00000642200.169581871aaENSP00000495919.1
 
Protein coding
-Q3V6T2-1 -GENCODE basicAPPRIS ALT1
CCDC88A-265ENST00000647396.164931135aaENSP00000496591.1
 
Protein coding
-A0A2R8Y820 -CDS 5' incomplete
CCDC88A-219ENST00000642563.164011108aaENSP00000493994.1
 
Protein coding
-A0A2R8YCU9 -CDS 5' incomplete
CCDC88A-238ENST00000644512.16171939aaENSP00000495933.1
 
Protein coding
-A0A2R8Y7D4 -CDS 5' incomplete
CCDC88A-225ENST00000643375.16142930aaENSP00000494876.1
 
Protein coding
-A0A2R8YDS8 -CDS 5' incomplete
CCDC88A-245ENST00000645072.156231493aaENSP00000494030.1
 
Protein coding
-A0A2R8Y4W8 -GENCODE basicAPPRIS ALT2
CCDC88A-250ENST00000645477.155931494aaENSP00000495712.1
 
Protein coding
-A0A2R8YG73 -GENCODE basicAPPRIS ALT2
CCDC88A-205ENST00000426576.651201202aaENSP00000405080.1
 
Protein coding
-H7C2C6 -TSL:1CDS 5' incomplete
CCDC88A-208ENST00000444458.54236374aaENSP00000413401.1
 
Protein coding
-H0Y7K3 -TSL:2CDS 5' incomplete
CCDC88A-255ENST00000645860.141511113aaENSP00000496581.1
 
Protein coding
-A0A2R8Y885 -CDS 5' incomplete
CCDC88A-211ENST00000471947.23707102aaENSP00000494991.1
 
Protein coding
-A0A2R8Y5R4 -GENCODE basicTSL:1
CCDC88A-214ENST00000621814.43089741aaENSP00000480931.1
 
Protein coding
-A0A087WXD9 -GENCODE basicTSL:5
CCDC88A-203ENST00000412148.62974888aaENSP00000390012.1
 
Protein coding
-H0Y470 -TSL:1CDS 5' incomplete
CCDC88A-239ENST00000644630.12971828aaENSP00000495652.1
 
Protein coding
-A0A2R8YG52 -CDS 3' incomplete
CCDC88A-262ENST00000647291.12671708aaENSP00000494376.1
 
Protein coding
-A0A2R8Y5D7 -CDS 5' incomplete
CCDC88A-267ENST00000647517.12316526aaENSP00000495183.1
 
Protein coding
-A0A2R8Y6B2 -CDS 3' incomplete
CCDC88A-209ENST00000456975.12208736aaENSP00000415267.1
 
Protein coding
-H0Y7U8 -TSL:2CDS 5' and 3' incomplete
CCDC88A-230ENST00000644033.12138495aaENSP00000496040.1
 
Protein coding
-A0A2R8Y7D9 -CDS 3' incomplete
CCDC88A-263ENST00000647341.11437317aaENSP00000493656.1
 
Protein coding
-A0A2R8YD81 -CDS 3' incomplete
CCDC88A-268ENST00000647547.11043166aaENSP00000493675.1
 
Protein coding
-A0A2R8Y4C6 -CDS 5' incomplete
CCDC88A-227ENST00000643440.1887296aaENSP00000494401.1
 
Protein coding
-A0A2R8Y4Z5 -CDS 5' and 3' incomplete
CCDC88A-213ENST00000476903.141955aaENSP00000494021.1
 
Protein coding
-A0A2R8YCW0 -TSL:3CDS 5' incomplete
CCDC88A-224ENST00000643265.17687974aaENSP00000496310.1
 
Nonsense mediated decay
-A0A2R8YGU1 -CDS 5' incomplete
CCDC88A-247ENST00000645311.171141406aaENSP00000494054.1
 
Nonsense mediated decay
-A0A2R8Y4X4 --
CCDC88A-257ENST00000646285.1701715aaENSP00000493638.1
 
Nonsense mediated decay
-A0A2R8YCJ0 -CDS 5' incomplete
CCDC88A-236ENST00000644415.13216299aaENSP00000496555.1
 
Nonsense mediated decay
-A0A2R8Y802 -CDS 5' incomplete
CCDC88A-261ENST00000647098.12179268aaENSP00000496475.1
 
Nonsense mediated decay
-A0A2R8Y846 --
CCDC88A-244ENST00000645031.11956268aaENSP00000493668.1
 
Nonsense mediated decay
-A0A2R8Y846 --
CCDC88A-221ENST00000642890.11875213aaENSP00000494371.1
 
Nonsense mediated decay
-A0A2R8YD99 --
CCDC88A-253ENST00000645529.11856130aaENSP00000496758.1
 
Nonsense mediated decay
-A0A2R8YFV1 --
CCDC88A-233ENST00000644193.11732133aaENSP00000495208.1
 
Nonsense mediated decay
-A0A2R8YFK8 --
CCDC88A-246ENST00000645168.1111894aaENSP00000496195.1
 
Nonsense mediated decay
-A0A2R8Y7L3 -CDS 5' incomplete
CCDC88A-242ENST00000644825.199042aaENSP00000494555.1
 
Nonsense mediated decay
-A0A2R8Y562 -CDS 5' incomplete
CCDC88A-251ENST00000645484.12097No protein-
 
Processed transcript
----
CCDC88A-210ENST00000468534.22074No protein-
 
Processed transcript
---TSL:3
CCDC88A-258ENST00000646324.11931No protein-
 
Processed transcript
----
CCDC88A-217ENST00000642328.1792No protein-
 
Processed transcript
----
CCDC88A-206ENST00000430086.1582No protein-
 
Processed transcript
---TSL:3
CCDC88A-254ENST00000645571.15499No protein-
 
Retained intron
----
CCDC88A-256ENST00000645969.14425No protein-
 
Retained intron
----
CCDC88A-241ENST00000644809.14286No protein-
 
Retained intron
----
CCDC88A-252ENST00000645485.13864No protein-
 
Retained intron
----
CCDC88A-243ENST00000644890.13596No protein-
 
Retained intron
----
CCDC88A-248ENST00000645342.13546No protein-
 
Retained intron
----
CCDC88A-229ENST00000643873.13360No protein-
 
Retained intron
----
CCDC88A-237ENST00000644456.13162No protein-
 
Retained intron
----
CCDC88A-235ENST00000644390.12712No protein-
 
Retained intron
----
CCDC88A-228ENST00000643634.12636No protein-
 
Retained intron
----
CCDC88A-249ENST00000645450.12039No protein-
 
Retained intron
----
CCDC88A-218ENST00000642514.12029No protein-
 
Retained intron
----
CCDC88A-222ENST00000643103.12008No protein-
 
Retained intron
----
CCDC88A-223ENST00000643205.11784No protein-
 
Retained intron
----
CCDC88A-216ENST00000642266.11777No protein-
 
Retained intron
----
CCDC88A-231ENST00000644127.11586No protein-
 
Retained intron
----
CCDC88A-264ENST00000647383.11424No protein-
 
Retained intron
----
CCDC88A-232ENST00000644157.11270No protein-
 
Retained intron
----
CCDC88A-220ENST00000642784.11270No protein-
 
Retained intron
----
CCDC88A-240ENST00000644662.11152No protein-
 
Retained intron
----
CCDC88A-259ENST00000646474.11151No protein-
 
Retained intron
----
CCDC88A-212ENST00000474059.2581No protein-
 
Retained intron
---TSL:5
CCDC88A-234ENST00000644332.1476No protein-
 
Retained intron
----
Description

treacle ribosome biogenesis factor 1 [Source:HGNC Symbol;Acc:HGNC:11654]

Gene Synonyms

TCS, treacle

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
TCOF1-216ENST00000643257.250261489aaENSP00000493815.1
 
Protein coding
-Q13428-3 NM_001371623.1MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P3
TCOF1-202ENST00000377797.750951488aaENSP00000367028.4
 
Protein coding
CCDS54936Q13428-1 -GENCODE basicTSL:5
TCOF1-201ENST00000323668.1148321411aaENSP00000325223.6
 
Protein coding
CCDS4306Q13428-2 -GENCODE basicTSL:1
TCOF1-206ENST00000445265.648251412aaENSP00000409944.2
 
Protein coding
CCDS47306Q13428-8 -GENCODE basicTSL:5
TCOF1-205ENST00000439160.646441451aaENSP00000406888.2
 
Protein coding
CCDS47305Q13428-7 -GENCODE basicAPPRIS ALT2TSL:5
TCOF1-207ENST00000504761.644671488aaENSP00000421655.2
 
Protein coding
CCDS54936Q13428-1 -GENCODE basicTSL:1
TCOF1-203ENST00000394269.73400958aaENSP00000377811.3
 
Protein coding
CCDS47307Q13428-5 -GENCODE basicTSL:1
TCOF1-204ENST00000427724.748001450aaENSP00000390717.3
 
Protein coding
-Q13428-6 -GENCODE basicAPPRIS ALT2TSL:5
TCOF1-211ENST00000513346.546461488aaENSP00000427484.1
 
Protein coding
-E7ETY2 -GENCODE basicTSL:5
TCOF1-219ENST00000650162.141941358aaENSP00000497075.1
 
Protein coding
-A0A3B3IS06 -CDS 3' incomplete
TCOF1-220ENST00000674413.137261240aaENSP00000501343.1
 
Protein coding
-A0A6I8PRA0 -CDS 5' incomplete
TCOF1-212ENST00000513538.23526994aaENSP00000422567.2
 
Protein coding
-H0Y8Y7 -GENCODE basicAPPRIS ALT2TSL:5
TCOF1-218ENST00000646961.1935297aaENSP00000496754.1
 
Protein coding
-A0A2R8Y857 -CDS 3' incomplete
TCOF1-215ENST00000515516.1661188aaENSP00000426471.1
 
Protein coding
-H0YA99 -TSL:5CDS 5' incomplete
TCOF1-217ENST00000643812.1974108aaENSP00000493833.1
 
Nonsense mediated decay
-A0A2R8Y4M7 -CDS 5' incomplete
TCOF1-210ENST00000506767.1869148aaENSP00000426587.1
 
Nonsense mediated decay
-H0YAB7 -TSL:5CDS 5' incomplete
TCOF1-208ENST00000506063.1526No protein-
 
Processed transcript
---TSL:4
TCOF1-214ENST00000515035.55240No protein-
 
Retained intron
---TSL:2
TCOF1-213ENST00000514442.55195No protein-
 
Retained intron
---TSL:2
TCOF1-209ENST00000506630.1897No protein-
 
Retained intron
---TSL:5
Description

potassium calcium-activated channel subfamily M alpha 1 [Source:HGNC Symbol;Acc:HGNC:6284]

Gene Synonyms

KCa1.1, SLO, mSLO1

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
KCNMA1-202ENST00000286628.1462611236aaENSP00000286628.8
 
Protein coding
CCDS60569Q12791-1 NM_001161352.2MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
KCNMA1-261ENST00000639486.188501177aaENSP00000492005.1
 
Protein coding
CCDS81481A0A1W2PQK5 -GENCODE basicTSL:5
KCNMA1-201ENST00000286627.1061941178aaENSP00000286627.5
 
Protein coding
CCDS7352Q12791-5 -GENCODE basicAPPRIS P4TSL:1
KCNMA1-278ENST00000640141.157051181aaENSP00000491418.1
 
Protein coding
CCDS86115A0A1W2PP94 -GENCODE basicAPPRIS ALT2TSL:5
KCNMA1-259ENST00000639406.155671208aaENSP00000491732.1
 
Protein coding
CCDS86116B7ZMF5 -GENCODE basicAPPRIS ALT2TSL:1
KCNMA1-228ENST00000638223.143401212aaENSP00000492492.1
 
Protein coding
CCDS86121A0A1W2PR56 -GENCODE basicAPPRIS ALT2TSL:5
KCNMA1-225ENST00000626620.336601219aaENSP00000485867.1
 
Protein coding
CCDS53545Q12791-2 -GENCODE basicAPPRIS ALT2TSL:1
KCNMA1-289ENST00000640807.133871128aaENSP00000491555.1
 
Protein coding
CCDS86106D5MRH1 -GENCODE basicTSL:1
KCNMA1-219ENST00000480683.22963168aaENSP00000474686.1
 
Protein coding
CCDS60571Q12791-6 -GENCODE basicTSL:1
KCNMA1-224ENST00000618048.21269213aaENSP00000482747.1
 
Protein coding
CCDS73156A0A087WZL8 -GENCODE basicTSL:1
KCNMA1-220ENST00000481070.1896128aaENSP00000475086.1
 
Protein coding
CCDS60572S4R453 -GENCODE basicTSL:2
KCNMA1-273ENST00000639913.1120711208aaENSP00000492241.1
 
Protein coding
-A0A1W2PRG5 -GENCODE basicAPPRIS ALT2TSL:5
KCNMA1-248ENST00000638991.1119901181aaENSP00000490978.1
 
Protein coding
-A0A1W2PNH9 -GENCODE basicTSL:5
KCNMA1-266ENST00000639601.1119201178aaENSP00000492806.1
 
Protein coding
-A0A1W2PSD3 -GENCODE basicTSL:5
KCNMA1-223ENST00000604624.6114001043aaENSP00000473714.2
 
Protein coding
-S4R2X4 -TSL:1CDS 5' incomplete
KCNMA1-254ENST00000639205.183941142aaENSP00000492718.1
 
Protein coding
-A0A1W2PS97 -TSL:5CDS 5' incomplete
KCNMA1-293ENST00000640969.157891207aaENSP00000492200.1
 
Protein coding
-Q12791-4 -GENCODE basicAPPRIS ALT2TSL:5
KCNMA1-203ENST00000354353.957321071aaENSP00000346321.6
 
Protein coding
-A0A0A0MRC3 -GENCODE basicTSL:5
KCNMA1-212ENST00000406533.756391040aaENSP00000385552.4
 
Protein coding
-J3KQ16 -GENCODE basicTSL:5
KCNMA1-283ENST00000640523.154251242aaENSP00000491795.1
 
Protein coding
-A0A1W2PPX7 -GENCODE basicTSL:5
KCNMA1-244ENST00000638754.150691020aaENSP00000491166.1
 
Protein coding
-A0A1W2PNY8 -TSL:5CDS 5' incomplete
KCNMA1-209ENST00000372443.650591209aaENSP00000361520.2
 
Protein coding
-Q5SVJ7 -GENCODE basicAPPRIS ALT2TSL:5
KCNMA1-263ENST00000639498.147111196aaENSP00000492835.1
 
Protein coding
-A0A1W2PRX6 -TSL:5CDS 5' incomplete
KCNMA1-246ENST00000638848.144231239aaENSP00000492414.1
 
Protein coding
-A0A1W2PRN5 -GENCODE basicTSL:5
KCNMA1-251ENST00000639090.143191230aaENSP00000491673.1
 
Protein coding
-A0A1W2PPY5 -GENCODE basicTSL:5
KCNMA1-262ENST00000639489.143021181aaENSP00000491927.1
 
Protein coding
-A0A1W2PQ61 -GENCODE basicTSL:5
KCNMA1-257ENST00000639344.140731185aaENSP00000492559.1
 
Protein coding
-A0A1W2PRE5 -TSL:5CDS 5' incomplete
KCNMA1-214ENST00000434208.640551207aaENSP00000402150.2
 
Protein coding
-Q12791-4 -GENCODE basicAPPRIS ALT2TSL:5
KCNMA1-210ENST00000404771.840141288aaENSP00000385717.3
 
Protein coding
-Q5SVJ8 -GENCODE basicAPPRIS ALT2TSL:5
KCNMA1-216ENST00000457953.639761235aaENSP00000396608.2
 
Protein coding
-Q5SVJ9 -GENCODE basicTSL:5
KCNMA1-265ENST00000639591.138881246aaENSP00000492793.1
 
Protein coding
-A0A1W2PRV4 -GENCODE basicTSL:5
KCNMA1-285ENST00000640605.138641238aaENSP00000491435.1
 
Protein coding
-A0A1W2PPZ1 -GENCODE basicTSL:5
KCNMA1-241ENST00000638606.138521234aaENSP00000491981.1
 
Protein coding
-A0A1W2PQA0 -GENCODE basicTSL:5
KCNMA1-279ENST00000640182.138521234aaENSP00000492510.1
 
Protein coding
-A0A1W2PRB0 -GENCODE basicTSL:5
KCNMA1-208ENST00000372440.638491233aaENSP00000361517.2
 
Protein coding
-A0A0A0MRR0 -GENCODE basicTSL:5
KCNMA1-233ENST00000638351.138491233aaENSP00000491156.1
 
Protein coding
-A0A1W2PNY9 -GENCODE basicTSL:5
KCNMA1-227ENST00000638203.138401230aaENSP00000491123.1
 
Protein coding
-A0A1W2PNW6 -GENCODE basicTSL:5
KCNMA1-232ENST00000638306.138111177aaENSP00000491008.1
 
Protein coding
-A0A1W2PNQ3 -GENCODE basicTSL:5
KCNMA1-206ENST00000372421.1038061182aaENSP00000361498.6
 
Protein coding
-H0Y382 -TSL:5CDS 5' incomplete
KCNMA1-205ENST00000372408.738051195aaENSP00000361485.3
 
Protein coding
-Q5SVK0 -TSL:5CDS 5' incomplete
KCNMA1-269ENST00000639716.13790575aaENSP00000491131.1
 
Protein coding
-A0A1W2PNX9 -TSL:5CDS 5' incomplete
KCNMA1-207ENST00000372437.637511232aaENSP00000361514.2
 
Protein coding
-Q5SVK5 -TSL:5CDS 5' incomplete
KCNMA1-245ENST00000638759.137231240aaENSP00000492632.1
 
Protein coding
-Q12791-3 -GENCODE basicAPPRIS ALT2TSL:5
KCNMA1-240ENST00000638575.137201239aaENSP00000492049.1
 
Protein coding
-Q12791-7 -GENCODE basicAPPRIS ALT2TSL:5
KCNMA1-264ENST00000639544.137111236aaENSP00000492075.1
 
Protein coding
-A0A1W2PR62 -GENCODE basicTSL:5
KCNMA1-238ENST00000638514.137111197aaENSP00000491840.1
 
Protein coding
-A0A1W2PQ93 -TSL:5CDS 3' incomplete
KCNMA1-247ENST00000638895.136841223aaENSP00000491207.1
 
Protein coding
-A0A1W2PP06 -TSL:5CDS 5' incomplete
KCNMA1-291ENST00000640834.136641178aaENSP00000491920.1
 
Protein coding
-A0A1W2PQU4 -GENCODE basicAPPRIS ALT2TSL:5
KCNMA1-271ENST00000639823.136381146aaENSP00000490982.1
 
Protein coding
-A0A1W2PNG1 -TSL:5CDS 5' incomplete
KCNMA1-258ENST00000639370.136241198aaENSP00000491277.1
 
Protein coding
-A0A1W2PP26 -TSL:5CDS 5' incomplete
KCNMA1-204ENST00000372403.935791192aaENSP00000361480.4
 
Protein coding
-H0Y379 -TSL:5CDS 5' incomplete
KCNMA1-276ENST00000640029.135371178aaENSP00000491463.1
 
Protein coding
-A0A1W2PPQ3 -TSL:5CDS 5' incomplete
KCNMA1-292ENST00000640934.135281175aaENSP00000491539.1
 
Protein coding
-A0A1W2PPH9 -TSL:5CDS 5' incomplete
KCNMA1-288ENST00000640773.134811161aaENSP00000491173.1
 
Protein coding
-A0A1W2PNY7 -TSL:5CDS 5' and 3' incomplete
KCNMA1-211ENST00000404857.634291142aaENSP00000385806.3
 
Protein coding
-A0A0A0MSE6 -TSL:5CDS 5' incomplete
KCNMA1-231ENST00000638283.134081122aaENSP00000491300.1
 
Protein coding
-A0A1W2PPS2 -TSL:5CDS 5' incomplete
KCNMA1-230ENST00000638252.133601119aaENSP00000492178.1
 
Protein coding
-A0A1W2PQJ9 -TSL:5CDS 5' incomplete
KCNMA1-286ENST00000640626.133481115aaENSP00000491545.1
 
Protein coding
-A0A1W2PQ53 -TSL:5CDS 5' incomplete
KCNMA1-270ENST00000639730.12962977aaENSP00000492519.1
 
Protein coding
-A0A1W2PRJ1 -TSL:5CDS 5' incomplete
KCNMA1-281ENST00000640353.12890964aaENSP00000492153.1
 
Protein coding
-A0A1W2PRA7 -TSL:5CDS 5' and 3' incomplete
KCNMA1-287ENST00000640632.12808190aaENSP00000492854.1
 
Protein coding
-A0A1W2PS54 -GENCODE basicTSL:2
KCNMA1-252ENST00000639120.12308584aaENSP00000492236.1
 
Protein coding
-A0A1W2PQR1 -GENCODE basicTSL:5
KCNMA1-226ENST00000637862.21643459aaENSP00000490881.2
 
Protein coding
-A0A1B0GWD4 -TSL:5CDS 3' incomplete
KCNMA1-215ENST00000450795.6996208aaENSP00000388370.2
 
Protein coding
-H0Y406 -TSL:2CDS 5' incomplete
KCNMA1-218ENST00000475352.1709100aaENSP00000491045.1
 
Protein coding
-A0A1W2PNN6 -TSL:3CDS 5' incomplete
KCNMA1-221ENST00000484343.264691aaENSP00000492283.1
 
Protein coding
-A0A1W2PRF1 -TSL:2CDS 5' incomplete
KCNMA1-239ENST00000638531.159930aaENSP00000491374.1
 
Protein coding
-A0A1W2PP76 -TSL:5CDS 3' incomplete
KCNMA1-243ENST00000638751.1493997aaENSP00000492172.1
 
Nonsense mediated decay
-A0A1W2PRC3 -TSL:5CDS 5' incomplete
KCNMA1-274ENST00000639968.14126422aaENSP00000491723.1
 
Nonsense mediated decay
-A0A1W2PPT7 -TSL:5
KCNMA1-260ENST00000639483.14021403aaENSP00000492406.1
 
Nonsense mediated decay
-A0A1W2PQZ8 -TSL:5
KCNMA1-275ENST00000639995.13464583aaENSP00000491902.1
 
Nonsense mediated decay
-A0A1W2PQ39 -TSL:5CDS 5' incomplete
KCNMA1-277ENST00000640093.13434357aaENSP00000492224.1
 
Nonsense mediated decay
-A0A1W2PQZ4 -TSL:5CDS 5' incomplete
KCNMA1-268ENST00000639691.13145154aaENSP00000491040.1
 
Nonsense mediated decay
-A0A1W2PNN5 -TSL:1CDS 5' incomplete
KCNMA1-236ENST00000638506.1212478aaENSP00000492740.1
 
Nonsense mediated decay
-A0A1W2PSA7 -TSL:5CDS 5' incomplete
KCNMA1-282ENST00000640386.1176999aaENSP00000491313.1
 
Nonsense mediated decay
-A0A1W2PP37 -TSL:5CDS 5' incomplete
KCNMA1-229ENST00000638249.11355383aaENSP00000492837.1
 
Nonsense mediated decay
-A0A1W2PRT6 -TSL:5CDS 5' incomplete
KCNMA1-250ENST00000639069.13899No protein-
 
Processed transcript
---TSL:5
KCNMA1-272ENST00000639851.13866No protein-
 
Processed transcript
---TSL:1
KCNMA1-294ENST00000674918.13793No protein-
 
Processed transcript
----
KCNMA1-284ENST00000640570.13487No protein-
 
Processed transcript
---TSL:5
KCNMA1-249ENST00000638999.12527No protein-
 
Processed transcript
---TSL:5
KCNMA1-235ENST00000638370.11515No protein-
 
Processed transcript
---TSL:5
KCNMA1-213ENST00000428546.21012No protein-
 
Processed transcript
---TSL:5
KCNMA1-280ENST00000640311.1897No protein-
 
Processed transcript
---TSL:3
KCNMA1-222ENST00000484507.6681No protein-
 
Processed transcript
---TSL:5
KCNMA1-290ENST00000640824.1645No protein-
 
Processed transcript
---TSL:4
KCNMA1-237ENST00000638512.1631No protein-
 
Processed transcript
---TSL:2
KCNMA1-234ENST00000638361.1580No protein-
 
Processed transcript
---TSL:4
KCNMA1-217ENST00000468471.2439No protein-
 
Processed transcript
---TSL:3
KCNMA1-242ENST00000638632.19904No protein-
 
Retained intron
---TSL:5
KCNMA1-267ENST00000639657.14098No protein-
 
Retained intron
---TSL:5
KCNMA1-255ENST00000639282.12507No protein-
 
Retained intron
---TSL:2
KCNMA1-256ENST00000639321.12312No protein-
 
Retained intron
---TSL:5
KCNMA1-253ENST00000639204.11866No protein-
 
Retained intron
---TSL:5
Description

small nucleolar RNA host gene 1 [Source:HGNC Symbol;Acc:HGNC:32688]

Gene Synonyms

LINC00057, NCRNA00057, UHG, lncRNA16

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
SNHG1-245ENST00000665371.13294No protein-
 
Retained intron
---
SNHG1-201ENST00000535076.62812No protein-
 
Retained intron
--TSL:2
SNHG1-207ENST00000537965.62772No protein-
 
Retained intron
--TSL:5
SNHG1-209ENST00000538654.62769No protein-
 
Retained intron
--TSL:2
SNHG1-237ENST00000661616.12336No protein-
 
Retained intron
---
SNHG1-202ENST00000535689.62173No protein-
 
Retained intron
--TSL:2
SNHG1-216ENST00000541416.62078No protein-
 
Retained intron
--TSL:2
SNHG1-203ENST00000537024.61727No protein-
 
Retained intron
--TSL:5
SNHG1-220ENST00000544550.61689No protein-
 
Retained intron
--TSL:2
SNHG1-214ENST00000540865.5784No protein-
 
Retained intron
--TSL:5
SNHG1-222ENST00000545308.5646No protein-
 
Retained intron
--TSL:2
SNHG1-224ENST00000545688.5610No protein-
 
Retained intron
--TSL:3
SNHG1-215ENST00000540904.1594No protein-
 
Retained intron
--TSL:5
SNHG1-246ENST00000665512.13065No protein-
 
lncRNA
--Ensembl Canonical
SNHG1-231ENST00000656268.13771No protein-
 
lncRNA
---
SNHG1-225ENST00000545920.23527No protein-
 
lncRNA
--GENCODE basicTSL:2
SNHG1-236ENST00000660960.13500No protein-
 
lncRNA
---
SNHG1-228ENST00000655919.13489No protein-
 
lncRNA
---
SNHG1-249ENST00000668309.13302No protein-
 
lncRNA
---
SNHG1-244ENST00000664307.13228No protein-
 
lncRNA
---
SNHG1-242ENST00000663237.13119No protein-
 
lncRNA
---
SNHG1-226ENST00000652879.12982No protein-
 
lncRNA
---
SNHG1-254ENST00000671236.12843No protein-
 
lncRNA
---
SNHG1-253ENST00000670729.12763No protein-
 
lncRNA
---
SNHG1-240ENST00000662400.12560No protein-
 
lncRNA
---
SNHG1-251ENST00000670469.12470No protein-
 
lncRNA
---
SNHG1-229ENST00000656240.12456No protein-
 
lncRNA
---
SNHG1-238ENST00000661936.12345No protein-
 
lncRNA
---
SNHG1-239ENST00000662229.12309No protein-
 
lncRNA
---
SNHG1-232ENST00000656589.12152No protein-
 
lncRNA
--GENCODE basic
SNHG1-221ENST00000544983.21968No protein-
 
lncRNA
--TSL:2
SNHG1-235ENST00000660730.11944No protein-
 
lncRNA
--GENCODE basic
SNHG1-230ENST00000656241.11828No protein-
 
lncRNA
---
SNHG1-234ENST00000660547.11785No protein-
 
lncRNA
---
SNHG1-247ENST00000667655.11782No protein-
 
lncRNA
---
SNHG1-252ENST00000670502.11752No protein-
 
lncRNA
--GENCODE basic
SNHG1-233ENST00000658540.11513No protein-
 
lncRNA
---
SNHG1-206ENST00000537925.51487No protein-
 
lncRNA
--GENCODE basicTSL:1
SNHG1-227ENST00000653690.11438No protein-
 
lncRNA
---
SNHG1-213ENST00000540725.61394No protein-
 
lncRNA
--TSL:1
SNHG1-241ENST00000663092.11320No protein-
 
lncRNA
---
SNHG1-243ENST00000663967.11202No protein-
 
lncRNA
---
SNHG1-248ENST00000668048.11158No protein-
 
lncRNA
---
SNHG1-211ENST00000539921.61117No protein-
 
lncRNA
--TSL:2
SNHG1-250ENST00000670323.11112No protein-
 
lncRNA
---
SNHG1-205ENST00000537869.51038No protein-
 
lncRNA
--TSL:3
SNHG1-212ENST00000539975.5955No protein-
 
lncRNA
--TSL:5
SNHG1-217ENST00000541578.6897No protein-
 
lncRNA
--TSL:3
SNHG1-219ENST00000542112.5780No protein-
 
lncRNA
--TSL:3
SNHG1-223ENST00000545440.5754No protein-
 
lncRNA
--TSL:2
SNHG1-218ENST00000541615.5748No protein-
 
lncRNA
--TSL:5
SNHG1-204ENST00000537068.5629No protein-
 
lncRNA
--TSL:5
SNHG1-208ENST00000538266.5347No protein-
 
lncRNA
--TSL:3
SNHG1-210ENST00000539303.5240No protein-
 
lncRNA
--TSL:3
Description

neuralized E3 ubiquitin protein ligase 4 [Source:HGNC Symbol;Acc:HGNC:34410]

Gene Synonyms

KIAA1787

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
NEURL4-202ENST00000399464.752071562aaENSP00000382390.2
 
Protein coding
CCDS42251Q96JN8-1 NM_032442.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P4TSL:1
NEURL4-201ENST00000315614.1151821560aaENSP00000319826.7
 
Protein coding
CCDS42252Q96JN8-2 -GENCODE basicAPPRIS ALT2TSL:1
NEURL4-203ENST00000570460.548901538aaENSP00000459978.1
 
Protein coding
-I3L2W2 -GENCODE basicAPPRIS ALT2TSL:5
NEURL4-206ENST00000571887.542911430aaENSP00000458469.1
 
Protein coding
-I3L100 -TSL:5CDS 5' and 3' incomplete
NEURL4-209ENST00000573186.544311017aaENSP00000460062.1
 
Nonsense mediated decay
-I3L2Z9 -TSL:5CDS 5' incomplete
NEURL4-210ENST00000573651.51850249aaENSP00000467514.1
 
Nonsense mediated decay
-K7EPS7 -TSL:5CDS 5' incomplete
NEURL4-211ENST00000574120.1936No protein-
 
Processed transcript
---TSL:5
NEURL4-213ENST00000576794.5833No protein-
 
Retained intron
---TSL:5
NEURL4-208ENST00000572680.1819No protein-
 
Retained intron
---TSL:2
NEURL4-214ENST00000576966.5712No protein-
 
Retained intron
---TSL:4
NEURL4-212ENST00000576485.1668No protein-
 
Retained intron
---TSL:5
NEURL4-205ENST00000571508.5637No protein-
 
Retained intron
---TSL:3
NEURL4-207ENST00000572029.1616No protein-
 
Retained intron
---TSL:4
NEURL4-204ENST00000571243.1460No protein-
 
Retained intron
---TSL:3
Description

WD repeat domain 27 [Source:HGNC Symbol;Acc:HGNC:21248]

Gene Synonyms

MGC43690

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
WDR27-203ENST00000448612.63554895aaENSP00000416289.1
 
Protein coding
CCDS47520A2RRH5-4 NM_182552.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS ALT2TSL:1
WDR27-201ENST00000423258.52465730aaENSP00000397869.1
 
Protein coding
CCDS56459A2RRH5-2 -GENCODE basicAPPRIS P4TSL:1
WDR27-219ENST00000650296.12991177aaENSP00000497675.1
 
Protein coding
-A0A3B3IT90 -GENCODE basic
WDR27-213ENST00000647873.12176437aaENSP00000497692.1
 
Protein coding
-A0A3B3ITF5 -GENCODE basic
WDR27-205ENST00000474018.195188aaENSP00000449696.1
 
Protein coding
-F8VUY7 -TSL:2CDS 3' incomplete
WDR27-202ENST00000441385.2683195aaENSP00000411915.2
 
Protein coding
-H7C3H5 -TSL:3CDS 5' incomplete
WDR27-214ENST00000647889.14654163aaENSP00000497364.1
 
Nonsense mediated decay
-A0A3B3ISN9 --
WDR27-212ENST00000647790.14102177aaENSP00000498206.1
 
Nonsense mediated decay
-A0A3B3IT90 --
WDR27-216ENST00000648472.13260128aaENSP00000496961.1
 
Nonsense mediated decay
-A0A3B3IRT0 --
WDR27-217ENST00000649303.12554338aaENSP00000497180.1
 
Nonsense mediated decay
-A0A3B3IS64 --
WDR27-215ENST00000648017.11403181aaENSP00000497622.1
 
Nonsense mediated decay
-B4DDD4 --
WDR27-210ENST00000546525.53511No protein-
 
Processed transcript
---TSL:1
WDR27-207ENST00000479310.51289No protein-
 
Processed transcript
---TSL:5
WDR27-204ENST00000467418.1947No protein-
 
Processed transcript
---TSL:5
WDR27-208ENST00000486490.1492No protein-
 
Processed transcript
---TSL:5
WDR27-211ENST00000546953.13175No protein-
 
Retained intron
---TSL:2
WDR27-218ENST00000649806.12028No protein-
 
Retained intron
----
WDR27-209ENST00000496752.11562No protein-
 
Retained intron
---TSL:5
WDR27-206ENST00000476322.1779No protein-
 
Retained intron
---TSL:3
Description

PCBP1 antisense RNA 1 [Source:HGNC Symbol;Acc:HGNC:42948]

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSRefSeq MatchFlags
PCBP1-AS1-221ENST00000424748.1793No protein-
 
Retained intron
--TSL:5
PCBP1-AS1-331ENST00000628659.2922No protein-
 
lncRNA
--Ensembl CanonicalTSL:5
PCBP1-AS1-440ENST00000682294.14755No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-441ENST00000684630.14136No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-367ENST00000630975.34088No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-214ENST00000419542.43975No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-423ENST00000666075.13908No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-383ENST00000655086.13899No protein-
 
lncRNA
---
PCBP1-AS1-375ENST00000653606.13740No protein-
 
lncRNA
---
PCBP1-AS1-374ENST00000653596.13314No protein-
 
lncRNA
---
PCBP1-AS1-398ENST00000659941.13305No protein-
 
lncRNA
---
PCBP1-AS1-355ENST00000629943.33287No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-400ENST00000660903.13285No protein-
 
lncRNA
---
PCBP1-AS1-431ENST00000669583.13254No protein-
 
lncRNA
---
PCBP1-AS1-429ENST00000668711.13235No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-424ENST00000666167.13185No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-377ENST00000654336.13154No protein-
 
lncRNA
---
PCBP1-AS1-209ENST00000416068.63118No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-386ENST00000655420.12985No protein-
 
lncRNA
---
PCBP1-AS1-436ENST00000670785.12825No protein-
 
lncRNA
---
PCBP1-AS1-415ENST00000664754.12817No protein-
 
lncRNA
---
PCBP1-AS1-422ENST00000666074.12769No protein-
 
lncRNA
---
PCBP1-AS1-401ENST00000661703.12760No protein-
 
lncRNA
---
PCBP1-AS1-287ENST00000625955.32733No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-382ENST00000655058.12690No protein-
 
lncRNA
---
PCBP1-AS1-403ENST00000661989.12688No protein-
 
lncRNA
---
PCBP1-AS1-421ENST00000665838.12679No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-378ENST00000654601.12673No protein-
 
lncRNA
---
PCBP1-AS1-380ENST00000654878.12658No protein-
 
lncRNA
---
PCBP1-AS1-418ENST00000665172.12646No protein-
 
lncRNA
---
PCBP1-AS1-408ENST00000663209.12625No protein-
 
lncRNA
---
PCBP1-AS1-371ENST00000653064.12612No protein-
 
lncRNA
---
PCBP1-AS1-381ENST00000654958.12605No protein-
 
lncRNA
---
PCBP1-AS1-388ENST00000656308.12596No protein-
 
lncRNA
---
PCBP1-AS1-435ENST00000670313.12575No protein-
 
lncRNA
---
PCBP1-AS1-362ENST00000630520.32556No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-379ENST00000654716.12527No protein-
 
lncRNA
---
PCBP1-AS1-385ENST00000655140.12521No protein-
 
lncRNA
---
PCBP1-AS1-219ENST00000422515.62513No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-409ENST00000663375.12500No protein-
 
lncRNA
---
PCBP1-AS1-433ENST00000669896.12499No protein-
 
lncRNA
---
PCBP1-AS1-412ENST00000664419.12497No protein-
 
lncRNA
---
PCBP1-AS1-390ENST00000656852.12492No protein-
 
lncRNA
---
PCBP1-AS1-293ENST00000626509.32481No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-416ENST00000664773.12475No protein-
 
lncRNA
---
PCBP1-AS1-210ENST00000416395.62457No protein-
 
lncRNA
--TSL:2
PCBP1-AS1-404ENST00000662103.12451No protein-
 
lncRNA
---
PCBP1-AS1-236ENST00000449178.62409No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-223ENST00000425601.62393No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-227ENST00000435880.62386No protein-
 
lncRNA
--GENCODE basicTSL:1
PCBP1-AS1-430ENST00000669570.12356No protein-
 
lncRNA
---
PCBP1-AS1-437ENST00000670786.12353No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-396ENST00000659531.12331No protein-
 
lncRNA
---
PCBP1-AS1-411ENST00000664049.12330No protein-
 
lncRNA
---
PCBP1-AS1-395ENST00000659305.12315No protein-
 
lncRNA
---
PCBP1-AS1-389ENST00000656326.12300No protein-
 
lncRNA
---
PCBP1-AS1-439ENST00000670974.12274No protein-
 
lncRNA
---
PCBP1-AS1-373ENST00000653289.12259No protein-
 
lncRNA
---
PCBP1-AS1-393ENST00000657575.12257No protein-
 
lncRNA
---
PCBP1-AS1-394ENST00000658454.12242No protein-
 
lncRNA
---
PCBP1-AS1-376ENST00000653811.12232No protein-
 
lncRNA
---
PCBP1-AS1-402ENST00000661863.12216No protein-
 
lncRNA
---
PCBP1-AS1-295ENST00000626558.32205No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-230ENST00000439670.62180No protein-
 
lncRNA
--GENCODE basicTSL:2
PCBP1-AS1-427ENST00000667952.12170No protein-
 
lncRNA
---
PCBP1-AS1-434ENST00000670036.12156No protein-
 
lncRNA
---
PCBP1-AS1-428ENST00000668191.12149No protein-
 
lncRNA
---
PCBP1-AS1-266ENST00000612202.52131No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-417ENST00000664958.12112No protein-
 
lncRNA
---
PCBP1-AS1-387ENST00000655481.12105No protein-
 
lncRNA
---
PCBP1-AS1-410ENST00000664014.12091No protein-
 
lncRNA
---
PCBP1-AS1-384ENST00000655096.12077No protein-
 
lncRNA
---
PCBP1-AS1-391ENST00000657164.11985No protein-
 
lncRNA
---
PCBP1-AS1-425ENST00000667307.11958No protein-
 
lncRNA
---
PCBP1-AS1-392ENST00000657291.11931No protein-
 
lncRNA
---
PCBP1-AS1-243ENST00000458698.61893No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-228ENST00000437019.21852No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-438ENST00000670845.11847No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-426ENST00000667874.11835No protein-
 
lncRNA
--GENCODE basic
PCBP1-AS1-405ENST00000662224.11646No protein-
 
lncRNA
---
PCBP1-AS1-264ENST00000609543.61639No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-216ENST00000420309.61611No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-432ENST00000669812.11527No protein-
 
lncRNA
---
PCBP1-AS1-414ENST00000664533.11498No protein-
 
lncRNA
---
PCBP1-AS1-372ENST00000653114.11482No protein-
 
lncRNA
---
PCBP1-AS1-399ENST00000660404.11388No protein-
 
lncRNA
---
PCBP1-AS1-420ENST00000665708.11385No protein-
 
lncRNA
---
PCBP1-AS1-240ENST00000457770.61340No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-357ENST00000630214.21333No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-397ENST00000659586.11329No protein-
 
lncRNA
---
PCBP1-AS1-419ENST00000665264.11286No protein-
 
lncRNA
---
PCBP1-AS1-283ENST00000625788.31268No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-313ENST00000627327.21257No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-349ENST00000629533.21227No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-244ENST00000594376.61197No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-237ENST00000452431.51194No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-413ENST00000664483.11189No protein-
 
lncRNA
---
PCBP1-AS1-320ENST00000627918.21146No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-407ENST00000663033.11136No protein-
 
lncRNA
---
PCBP1-AS1-232ENST00000442040.51111No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-310ENST00000627181.21099No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-325ENST00000628305.21063No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-359ENST00000630283.21063No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-224ENST00000429599.61045No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-294ENST00000626515.21041No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-279ENST00000625625.21025No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-242ENST00000458686.51020No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-326ENST00000628308.2996No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-304ENST00000626898.2961No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-260ENST00000602091.1959No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-351ENST00000629605.2954No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-365ENST00000630746.2932No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-363ENST00000630522.2927No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-276ENST00000625447.2923No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-314ENST00000627398.2922No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-307ENST00000627050.2912No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-289ENST00000626343.2910No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-231ENST00000439892.6907No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-336ENST00000628920.2895No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-335ENST00000628883.2891No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-366ENST00000630759.2891No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-296ENST00000626574.2887No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-201ENST00000366234.7884No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-238ENST00000456161.5880No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-350ENST00000629603.2874No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-308ENST00000627074.2871No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-343ENST00000629339.2870No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-334ENST00000628837.2866No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-278ENST00000625518.2864No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-212ENST00000418308.5863No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-255ENST00000600002.5861No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-269ENST00000613944.3851No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-370ENST00000631110.2851No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-247ENST00000596028.5847No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-272ENST00000625215.2844No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-369ENST00000631107.2840No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-259ENST00000601494.1834No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-341ENST00000629212.2827No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-282ENST00000625783.2826No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-315ENST00000627487.3815No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-330ENST00000628551.2813No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-297ENST00000626609.2809No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-234ENST00000444320.5809No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-354ENST00000629909.2807No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-250ENST00000596665.5800No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-248ENST00000596259.3791No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-290ENST00000626370.2784No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-347ENST00000629485.2784No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-352ENST00000629825.2778No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-249ENST00000596573.5774No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-345ENST00000629407.2767No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-328ENST00000628374.2766No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-292ENST00000626495.2765No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-286ENST00000625888.2765No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-337ENST00000629084.2761No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-324ENST00000628263.2755No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-332ENST00000628667.2745No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-285ENST00000625864.2744No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-273ENST00000625227.2743No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-205ENST00000413791.5743No protein-
 
lncRNA
--TSL:2
PCBP1-AS1-303ENST00000626842.2741No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-311ENST00000627189.2740No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-262ENST00000604346.5736No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-339ENST00000629184.2731No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-353ENST00000629836.2723No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-346ENST00000629415.2723No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-300ENST00000626735.2717No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-406ENST00000662425.1709No protein-
 
lncRNA
---
PCBP1-AS1-298ENST00000626632.2708No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-340ENST00000629188.2705No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-318ENST00000627542.2702No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-306ENST00000627037.2700No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-288ENST00000626162.2696No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-327ENST00000628322.2694No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-217ENST00000421255.5694No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-252ENST00000598586.1693No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-245ENST00000594548.5692No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-316ENST00000627528.2682No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-257ENST00000601396.5679No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-344ENST00000629374.2676No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-312ENST00000627325.2673No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-233ENST00000442326.1668No protein-
 
lncRNA
--GENCODE basicTSL:3
PCBP1-AS1-348ENST00000629506.2667No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-319ENST00000627630.2666No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-277ENST00000625490.2666No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-254ENST00000599673.5665No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-218ENST00000421843.5664No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-317ENST00000627540.2662No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-253ENST00000599427.5662No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-271ENST00000617142.3658No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-275ENST00000625439.2651No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-261ENST00000603347.5651No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-274ENST00000625257.2648No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-321ENST00000628102.2644No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-356ENST00000630206.2637No protein-
 
lncRNA
--TSL:2
PCBP1-AS1-361ENST00000630457.2635No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-364ENST00000630685.2633No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-323ENST00000628201.2624No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-246ENST00000595459.5624No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-333ENST00000628757.2623No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-256ENST00000601395.1614No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-309ENST00000627155.2610No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-284ENST00000625838.2609No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-270ENST00000614826.4609No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-204ENST00000413436.5602No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-301ENST00000626769.2602No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-251ENST00000597318.5599No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-360ENST00000630377.2598No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-368ENST00000630985.2594No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-229ENST00000437456.5583No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-225ENST00000432604.5569No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-358ENST00000630280.2566No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-299ENST00000626683.2565No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-226ENST00000434781.5565No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-215ENST00000419963.5564No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-208ENST00000415742.5564No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-203ENST00000413069.5563No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-280ENST00000625691.2561No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-322ENST00000628147.2553No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-220ENST00000423402.5553No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-213ENST00000418564.5547No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-202ENST00000411429.5547No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-222ENST00000425333.5546No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-239ENST00000457076.5542No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-211ENST00000416506.5542No protein-
 
lncRNA
--TSL:1
PCBP1-AS1-263ENST00000609075.5520No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-338ENST00000629178.2517No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-206ENST00000415060.6507No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-207ENST00000415222.5502No protein-
 
lncRNA
--TSL:4
PCBP1-AS1-241ENST00000457870.5501No protein-
 
lncRNA
--TSL:3
PCBP1-AS1-235ENST00000444410.5478No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-291ENST00000626440.2461No protein-
 
lncRNA
--GENCODE basicTSL:5
PCBP1-AS1-302ENST00000626834.2453No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-268ENST00000612876.4417No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-342ENST00000629304.1397No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-267ENST00000612430.3374No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-265ENST00000610168.1365No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-329ENST00000628455.2361No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-258ENST00000601431.5360No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-281ENST00000625724.1218No protein-
 
lncRNA
--TSL:5
PCBP1-AS1-305ENST00000627019.1208No protein-
 
lncRNA
--TSL:5
Description

potassium channel tetramerisation domain containing 17 [Source:MGI Symbol;Acc:MGI:1920094]

Gene Synonyms

2900008M13Rik

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Kctd17-209ENSMUST00000166142.101632225aaENSMUSP00000133210.3
 
Protein coding
CCDS79385F6SYN4 GENCODE basicAPPRIS ALT2TSL:1
Kctd17-206ENSMUST00000162517.8901250aaENSMUSP00000124290.2
 
Protein coding
CCDS79384E0CYD2 GENCODE basicAPPRIS P4TSL:1
Kctd17-201ENSMUST00000089414.111180296aaENSMUSP00000086835.5
 
Protein coding
-E0CYQ0 GENCODE basicAPPRIS ALT2TSL:5
Kctd17-202ENSMUST00000159771.8986213aaENSMUSP00000125574.2
 
Protein coding
-E0CZ97 GENCODE basicAPPRIS ALT2TSL:2
Kctd17-211ENSMUST00000229622.2706173aaENSMUSP00000155227.2
 
Protein coding
-A0A2R8VHM0 CDS 5' incomplete
Kctd17-208ENSMUST00000162808.2655210aaENSMUSP00000125421.2
 
Protein coding
-F7C1U0 TSL:5CDS 5' incomplete
Kctd17-210ENSMUST00000229290.2539118aaENSMUSP00000155643.2
 
Protein coding
-A0A2R8VKL1 GENCODE basic
Kctd17-205ENSMUST00000162321.8855206aaENSMUSP00000125680.2
 
Nonsense mediated decay
-F7B6A4 TSL:5CDS 5' incomplete
Kctd17-203ENSMUST00000160916.81146No protein-
 
Retained intron
--TSL:3
Kctd17-204ENSMUST00000161016.8750No protein-
 
Retained intron
--TSL:2
Kctd17-207ENSMUST00000162605.2671No protein-
 
Retained intron
--TSL:3
Description

eukaryotic translation initiation factor 2D [Source:HGNC Symbol;Acc:HGNC:6583]

Gene Synonyms

LGTN

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
EIF2D-201ENST00000271764.72011584aaENSP00000271764.2
 
Protein coding
CCDS1465P41214-1 NM_006893.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
EIF2D-202ENST00000367114.71633460aaENSP00000356081.3
 
Protein coding
CCDS55680P41214-2 -GENCODE basicAPPRIS ALT2TSL:1
EIF2D-203ENST00000437518.1920270aaENSP00000394685.1
 
Protein coding
-Q5SY38 -TSL:3CDS 3' incomplete
EIF2D-206ENST00000472709.675062aaENSP00000484299.1
 
Nonsense mediated decay
-A0A087X1L6 -TSL:5CDS 5' incomplete
EIF2D-208ENST00000484492.547966aaENSP00000479327.1
 
Nonsense mediated decay
-A0A087WVB6 -TSL:5CDS 5' incomplete
EIF2D-209ENST00000613435.143773aaENSP00000484590.1
 
Nonsense mediated decay
-A0A087X202 -TSL:3CDS 5' incomplete
EIF2D-207ENST00000474408.1484No protein-
 
Processed transcript
---TSL:3
EIF2D-204ENST00000461334.1411No protein-
 
Processed transcript
---TSL:2
EIF2D-210ENST00000617960.45224No protein-
 
Retained intron
---TSL:1
EIF2D-211ENST00000620382.41274No protein-
 
Retained intron
---TSL:2
EIF2D-205ENST00000468891.2542No protein-
 
Retained intron
---TSL:3
Description

VRK serine/threonine kinase 1 [Source:HGNC Symbol;Acc:HGNC:12718]

Location
Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
VRK1-201ENST00000216639.81663396aaENSP00000216639.3
 
Protein coding
CCDS9947Q99986 NM_003384.3MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
VRK1-240ENST00000680756.12783396aaENSP00000506648.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-251ENST00000681344.11960396aaENSP00000506151.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-220ENST00000679816.11765396aaENSP00000506525.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-252ENST00000681355.11719396aaENSP00000506214.1
 
Protein coding
CCDS9947--GENCODE basicAPPRIS P2
VRK1-230ENST00000680335.15188375aaENSP00000505806.1
 
Protein coding
---GENCODE basic
VRK1-250ENST00000681249.12411395aaENSP00000506013.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-254ENST00000681419.11823393aaENSP00000505512.1
 
Protein coding
---GENCODE basic
VRK1-204ENST00000553683.21816420aaENSP00000451412.2
 
Protein coding
-H0YJF7 -GENCODE basicTSL:3
VRK1-239ENST00000680724.11813395aaENSP00000504891.1
 
Protein coding
---GENCODE basic
VRK1-219ENST00000679770.11704448aaENSP00000505214.1
 
Protein coding
---GENCODE basic
VRK1-249ENST00000681195.11697395aaENSP00000504933.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-238ENST00000680683.11682403aaENSP00000506334.1
 
Protein coding
---GENCODE basic
VRK1-216ENST00000679727.11673394aaENSP00000505844.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-223ENST00000679918.11638420aaENSP00000505439.1
 
Protein coding
---GENCODE basic
VRK1-241ENST00000680849.11634395aaENSP00000505602.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-256ENST00000681493.11625394aaENSP00000506429.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-212ENST00000679462.11527437aaENSP00000506011.1
 
Protein coding
---GENCODE basic
VRK1-226ENST00000680007.11525420aaENSP00000505683.1
 
Protein coding
---GENCODE basic
VRK1-242ENST00000680851.11511395aaENSP00000505159.1
 
Protein coding
---GENCODE basic
VRK1-222ENST00000679903.11444393aaENSP00000506022.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
VRK1-237ENST00000680538.11435366aaENSP00000505611.1
 
Protein coding
---GENCODE basic
VRK1-263ENST00000681785.11375356aaENSP00000505166.1
 
Protein coding
---CDS 3' incomplete
VRK1-209ENST00000557352.21320394aaENSP00000451682.2
 
Protein coding
-H0YJJ9 -GENCODE basicTSL:5
VRK1-217ENST00000679736.11202244aaENSP00000506517.1
 
Protein coding
---GENCODE basic
VRK1-235ENST00000680509.11130356aaENSP00000505209.1
 
Protein coding
---CDS 3' incomplete
VRK1-248ENST00000681176.11009314aaENSP00000505454.1
 
Protein coding
---GENCODE basic
VRK1-208ENST00000557222.6922228aaENSP00000450820.2
 
Protein coding
-H0YJ50 -TSL:5CDS 3' incomplete
VRK1-257ENST00000681524.16456244aaENSP00000505783.1
 
Nonsense mediated decay
----
VRK1-234ENST00000680387.12689444aaENSP00000504908.1
 
Nonsense mediated decay
----
VRK1-247ENST00000681101.12040413aaENSP00000506564.1
 
Nonsense mediated decay
----
VRK1-224ENST00000679941.12036375aaENSP00000506520.1
 
Nonsense mediated decay
----
VRK1-244ENST00000680993.11932172aaENSP00000505511.1
 
Nonsense mediated decay
----
VRK1-253ENST00000681363.11882372aaENSP00000505564.1
 
Nonsense mediated decay
----
VRK1-262ENST00000681778.11869375aaENSP00000506049.1
 
Nonsense mediated decay
----
VRK1-218ENST00000679758.11681362aaENSP00000505539.1
 
Nonsense mediated decay
----
VRK1-225ENST00000679977.11657249aaENSP00000504897.1
 
Nonsense mediated decay
----
VRK1-210ENST00000679365.11635442aaENSP00000505882.1
 
Nonsense mediated decay
----
VRK1-258ENST00000681538.11580321aaENSP00000506662.1
 
Nonsense mediated decay
----
VRK1-215ENST00000679650.11528101aaENSP00000505156.1
 
Nonsense mediated decay
----
VRK1-243ENST00000680922.11520244aaENSP00000506480.1
 
Nonsense mediated decay
----
VRK1-261ENST00000681695.1140283aaENSP00000506225.1
 
Nonsense mediated decay
----
VRK1-259ENST00000681598.1139683aaENSP00000506128.1
 
Nonsense mediated decay
----
VRK1-236ENST00000680526.1134783aaENSP00000505595.1
 
Nonsense mediated decay
----
VRK1-260ENST00000681677.1129746aaENSP00000505010.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-214ENST00000679533.1128772aaENSP00000505873.1
 
Nonsense mediated decay
----
VRK1-255ENST00000681474.11280302aaENSP00000505569.1
 
Nonsense mediated decay
----
VRK1-245ENST00000681061.1121146aaENSP00000506083.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-246ENST00000681077.11193161aaENSP00000505642.1
 
Nonsense mediated decay
----
VRK1-233ENST00000680384.1118272aaENSP00000506237.1
 
Nonsense mediated decay
----
VRK1-232ENST00000680348.11070170aaENSP00000504922.1
 
Nonsense mediated decay
----
VRK1-228ENST00000680222.1100381aaENSP00000506647.1
 
Nonsense mediated decay
----
VRK1-231ENST00000680339.1947101aaENSP00000506470.1
 
Nonsense mediated decay
----
VRK1-221ENST00000679843.187352aaENSP00000506467.1
 
Nonsense mediated decay
---CDS 5' incomplete
VRK1-211ENST00000679452.178599aaENSP00000505395.1
 
Nonsense mediated decay
----
VRK1-229ENST00000680319.1750No protein-
 
Processed transcript
----
VRK1-205ENST00000555067.211646No protein-
 
Retained intron
---TSL:3
VRK1-213ENST00000679506.13648No protein-
 
Retained intron
----
VRK1-202ENST00000435624.32131No protein-
 
Retained intron
---TSL:5
VRK1-227ENST00000680084.12013No protein-
 
Retained intron
----
VRK1-203ENST00000495064.21829No protein-
 
Retained intron
---TSL:5
VRK1-206ENST00000555351.2968No protein-
 
Retained intron
---TSL:2
VRK1-207ENST00000555402.1415No protein-
 
Retained intron
---TSL:3
Description

mediator complex subunit 13L [Source:HGNC Symbol;Acc:HGNC:22962]

Gene Synonyms

KIAA1025, THRAP2, TRAP240L

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
MED13L-201ENST00000281928.998852210aaENSP00000281928.3
 
Protein coding
CCDS9177Q71F56 NM_015335.5MANE Select v0.93Ensembl CanonicalGENCODE basicAPPRIS P2TSL:1
MED13L-229ENST00000650226.187172222aaENSP00000496981.1
 
Protein coding
-A0A3B3IRX3 -GENCODE basicAPPRIS ALT2
MED13L-222ENST00000649607.167401605aaENSP00000497064.1
 
Protein coding
-A0A3B3IS46 -CDS 5' incomplete
MED13L-206ENST00000549786.256831545aaENSP00000446782.2
 
Protein coding
-H0YHC1 -TSL:2CDS 5' incomplete
MED13L-203ENST00000548743.235321081aaENSP00000448553.2
 
Protein coding
-F8VRB8 -TSL:3CDS 3' incomplete
MED13L-210ENST00000647567.11312437aaENSP00000497136.1
 
Protein coding
-A0A3B3IS48 -CDS 5' and 3' incomplete
MED13L-207ENST00000551197.2985168aaENSP00000497043.1
 
Protein coding
-A0A3B3IS36 -TSL:5CDS 5' incomplete
MED13L-226ENST00000649775.14852495aaENSP00000496984.1
 
Nonsense mediated decay
-A0A3B3IRS4 -CDS 5' incomplete
MED13L-230ENST00000650375.1441No protein-
 
Processed transcript
----
MED13L-208ENST00000552023.2414No protein-
 
Processed transcript
---TSL:3
MED13L-215ENST00000648593.1360No protein-
 
Processed transcript
----
MED13L-212ENST00000648067.1272No protein-
 
Processed transcript
----
MED13L-232ENST00000650496.1262No protein-
 
Processed transcript
----
MED13L-223ENST00000649627.1202No protein-
 
Processed transcript
----
MED13L-216ENST00000648737.18299No protein-
 
Retained intron
----
MED13L-214ENST00000648379.17496No protein-
 
Retained intron
----
MED13L-218ENST00000648825.16478No protein-
 
Retained intron
----
MED13L-219ENST00000648916.14720No protein-
 
Retained intron
----
MED13L-224ENST00000649655.14712No protein-
 
Retained intron
----
MED13L-211ENST00000647927.14324No protein-
 
Retained intron
----
MED13L-204ENST00000548784.24250No protein-
 
Retained intron
---TSL:3
MED13L-217ENST00000648762.13989No protein-
 
Retained intron
----
MED13L-231ENST00000650443.13856No protein-
 
Retained intron
----
MED13L-220ENST00000649146.13237No protein-
 
Retained intron
----
MED13L-221ENST00000649378.12978No protein-
 
Retained intron
----
MED13L-225ENST00000649762.12749No protein-
 
Retained intron
----
MED13L-228ENST00000650091.12528No protein-
 
Retained intron
----
MED13L-205ENST00000549755.12339No protein-
 
Retained intron
---TSL:NA
MED13L-213ENST00000648173.12053No protein-
 
Retained intron
----
MED13L-227ENST00000649937.11926No protein-
 
Retained intron
----
MED13L-202ENST00000548694.2891No protein-
 
Retained intron
---TSL:5
MED13L-209ENST00000552340.1665No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 1, Coding exons: 0, Transcript length: 2,978 bps,

Version

ENST00000649378.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript-based displays

    HASH(0x32d208c0)