Human (GRCh38.p14)
Description

PDZ domain containing ring finger 3 [Source:HGNC Symbol;Acc:HGNC:17704]

Gene Synonyms

KIAA1095, LNX3, SEMACAP3, SEMCAP3

Location
About this transcript

This transcript has 4 exons, is annotated with 18 domains and features, is associated with 95236 variant alleles and maps to 155 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000263666.9PDZRN3-20142511066aaENSP00000263666.4
 
Protein coding
CCDS33789Q9UPQ7-1 NM_015009.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000462146.6PDZRN3-2032927723aaENSP00000418168.2
 
Protein coding
CCDS77770E7ENB6 -GENCODE basicTSL:2
ENST00000479530.5PDZRN3-2082778783aaENSP00000418624.1
 
Protein coding
CCDS77771B7ZAG0 -GENCODE basicTSL:2
ENST00000466780.5PDZRN3-2052737723aaENSP00000418484.1
 
Protein coding
CCDS77770E7ENB6 -GENCODE basicTSL:2
ENST00000494559.5PDZRN3-2112080382aaENSP00000419095.1
 
Protein coding
H7C566 -TSL:5CDS 5' incomplete
ENST00000492909.1PDZRN3-2101776492aaENSP00000419250.1
 
Protein coding
C9JWE6 -TSL:1CDS 3' incomplete
ENST00000308537.4PDZRN3-2021136360aaENSP00000308831.4
 
Protein coding
Q9UPQ7-2 -GENCODE basicTSL:1
ENST00000466348.5PDZRN3-204645No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000498048.1PDZRN3-212590No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000478209.1PDZRN3-207757No protein-
 
Retained intron
--TSL:4
ENST00000477434.5PDZRN3-206537No protein-
 
Retained intron
--TSL:4
ENST00000484487.1PDZRN3-209406No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,136 bps, Translation length: 360 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UPQ7

Transcript Support Level (TSL)

TSL:1

Version

ENST00000308537.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.