Human (GRCh38.p14)
Description

paraspeckle component 1 [Source:HGNC Symbol;Acc:HGNC:20320]

Gene Synonyms

FLJ10955, PSP1

Location
About this transcript

This transcript has 8 exons, is annotated with 1 domain and feature, is associated with 54376 variant alleles and maps to 526 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000338910.9PSPC1-2012435523aaENSP00000343966.4
 
Protein coding
CCDS41870Q8WXF1-1 NM_001354909.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000619300.4PSPC1-2062013523aaENSP00000481916.1
 
Protein coding
CCDS41870Q8WXF1-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000427943.1PSPC1-202866248aaENSP00000393069.1
 
Protein coding
X6RDA4 -TSL:5CDS 3' incomplete
ENST00000492741.5PSPC1-2041709393aaENSP00000435921.1
 
Nonsense mediated decay
CCDS86343Q8WXF1-2 -TSL:2
ENST00000471658.5PSPC1-2031647393aaENSP00000436038.1
 
Nonsense mediated decay
CCDS86343Q8WXF1-2 -TSL:1
ENST00000635562.1PSPC1-20842233aaENSP00000488975.1
 
Nonsense mediated decay
A0A0U1RQF9 -TSL:3CDS 5' incomplete
ENST00000635251.1PSPC1-2072285No protein-
 
Retained intron
--TSL:2
ENST00000497722.2PSPC1-205448No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,647 bps, Translation length: 393 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8WXF1

CCDS

This transcript is a member of the Human CCDS set: CCDS86343

Transcript Support Level (TSL)

TSL:1

Version

ENST00000471658.5

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.