Human (GRCh38.p14)
Description

TAR DNA binding protein [Source:HGNC Symbol;Acc:HGNC:11571]

Gene Synonyms

ALS10, TDP-43

Location
About this transcript

This transcript has 6 exons, is annotated with 146 domains and features, is associated with 6555 variant alleles and maps to 848 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000240185.8TARDBP-2014185414aaENSP00000240185.4
 
Protein coding
CCDS122Q13148-1 NM_007375.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000639083.1TARDBP-2362269414aaENSP00000491203.1
 
Protein coding
CCDS122Q13148-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000315091.7TARDBP-2021835295aaENSP00000313129.3
 
Protein coding
B1AKP7 -GENCODE basicTSL:5
ENST00000629725.2TARDBP-2351031298aaENSP00000486989.1
 
Protein coding
G3V162 -GENCODE basicTSL:5
ENST00000621790.4TARDBP-2321008304aaENSP00000482191.1
 
Protein coding
A0A087WYY0 -GENCODE basicTSL:5
ENST00000617172.4TARDBP-223980212aaENSP00000479219.1
 
Protein coding
A0A087WV68 -TSL:5CDS 5' incomplete
ENST00000476201.5TARDBP-207929275aaENSP00000466842.2
 
Protein coding
K7EN94 -TSL:5CDS 3' incomplete
ENST00000616545.4TARDBP-222920301aaENSP00000484722.1
 
Protein coding
A0A087X260 -GENCODE basicTSL:5
ENST00000621715.4TARDBP-231816243aaENSP00000480690.1
 
Protein coding
A0A087WX29 -TSL:3CDS 3' incomplete
ENST00000649624.1TARDBP-238810269aaENSP00000497327.1
 
Protein coding
A0A0A0N0M3 -GENCODE basic
ENST00000622057.4TARDBP-233706200aaENSP00000481206.1
 
Protein coding
A0A087WXQ5 -TSL:5CDS 5' incomplete
ENST00000473118.5TARDBP-205701201aaENSP00000465240.1
 
Protein coding
K7EJM5 -TSL:3CDS 3' incomplete
ENST00000610369.4TARDBP-212563127aaENSP00000482559.1
 
Protein coding
A0A087WZC9 -TSL:5CDS 5' incomplete
ENST00000612542.1TARDBP-21755461aaENSP00000478249.1
 
Protein coding
A0A087WTZ4 -TSL:5CDS 5' incomplete
ENST00000473869.5TARDBP-2061946298aaENSP00000432132.1
 
Nonsense mediated decay
G3V162 -TSL:5
ENST00000614757.4TARDBP-2211793298aaENSP00000481867.1
 
Nonsense mediated decay
G3V162 -TSL:5
ENST00000439080.6TARDBP-203138884aaENSP00000404666.3
 
Nonsense mediated decay
A0A0A0MSV7 -TSL:2
ENST00000639599.1TARDBP-2371283295aaENSP00000492196.1
 
Nonsense mediated decay
B1AKP7 -TSL:5
ENST00000472476.5TARDBP-204100180aaENSP00000465080.1
 
Nonsense mediated decay
K7EJ99 -TSL:5
ENST00000621573.1TARDBP-23099235aaENSP00000477852.1
 
Nonsense mediated decay
A0A087WTG4 -TSL:3CDS 5' incomplete
ENST00000611963.4TARDBP-215739175aaENSP00000481330.1
 
Nonsense mediated decay
A0A087WXV3 -TSL:5CDS 5' incomplete
ENST00000620632.4TARDBP-229706149aaENSP00000480771.1
 
Nonsense mediated decay
A0A087WX67 -TSL:3CDS 5' incomplete
ENST00000611136.4TARDBP-21470089aaENSP00000481737.1
 
Nonsense mediated decay
A0A087WYE7 -TSL:5CDS 5' incomplete
ENST00000496840.1TARDBP-21069216aaENSP00000467020.1
 
Nonsense mediated decay
K7ENM9 -TSL:3CDS 5' incomplete
ENST00000619555.4TARDBP-226682138aaENSP00000479978.1
 
Nonsense mediated decay
A0A087WW61 -TSL:5CDS 5' incomplete
ENST00000620505.1TARDBP-228657115aaENSP00000479758.1
 
Nonsense mediated decay
A0A087WVX6 -TSL:5CDS 5' incomplete
ENST00000622108.1TARDBP-23464516aaENSP00000480398.1
 
Nonsense mediated decay
K7ENM9 -TSL:5CDS 5' incomplete
ENST00000614494.1TARDBP-22051578aaENSP00000482754.1
 
Nonsense mediated decay
A0A087WZM1 -TSL:5CDS 5' incomplete
ENST00000477447.6TARDBP-20840965aaENSP00000465888.2
 
Nonsense mediated decay
K7EL26 -TSL:5CDS 5' incomplete
ENST00000611008.4TARDBP-213929No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000607145.1TARDBP-211870No protein-
 
Protein coding CDS not defined
--TSL:NA
ENST00000480464.2TARDBP-209790No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000620028.1TARDBP-227763No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000612387.1TARDBP-216651No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000613864.4TARDBP-219584No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000617757.1TARDBP-224434No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000613177.1TARDBP-218379No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000618606.1TARDBP-225584No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 6, Coding exons: 5, Transcript length: 4,185 bps, Translation length: 414 residues

MANE

This MANE Select transcript contains ENSP00000240185 and matches to NM_007375.4 and NP_031401.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13148

CCDS

This transcript is a member of the Human CCDS set: CCDS122

Transcript Support Level (TSL)

TSL:1

Version

ENST00000240185.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.