Human (GRCh38.p14)
Description

PDZ and LIM domain 2 [Source:HGNC Symbol;Acc:HGNC:13992]

Location
About this transcript

This transcript has 10 exons, is annotated with 26 domains and features, is associated with 8462 variant alleles and maps to 358 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000409417.6PDLIM2-2071577352aaENSP00000387084.1
 
Protein coding
CCDS94264Q96JY6-1 NM_001368120.1MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000265810.8PDLIM2-2014592366aaENSP00000265810.4
 
Protein coding
CCDS34860Q96JY6-3 -GENCODE basicTSL:1
ENST00000308354.11PDLIM2-2022236602aaENSP00000312634.7
 
Protein coding
CCDS6032Q96JY6-5 -GENCODE basicTSL:1
ENST00000339162.11PDLIM2-2032226602aaENSP00000342035.8
 
Protein coding
CCDS6032Q96JY6-5 -GENCODE basicTSL:1
ENST00000464275.5PDLIM2-2161995146aaENSP00000481268.1
 
Protein coding
B3KPU0 -GENCODE basicTSL:2
ENST00000397760.8PDLIM2-2041847352aaENSP00000380867.4
 
Protein coding
CCDS94264Q96JY6-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000397761.6PDLIM2-2051491352aaENSP00000380868.2
 
Protein coding
CCDS94264Q96JY6-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000409141.5PDLIM2-2061463278aaENSP00000386868.1
 
Protein coding
CCDS34861Q96JY6-4 -GENCODE basicTSL:2
ENST00000452226.5PDLIM2-214845254aaENSP00000394376.1
 
Protein coding
C9JS55 -TSL:2CDS 3' incomplete
ENST00000456545.5PDLIM2-215757235aaENSP00000401992.1
 
Protein coding
C9JSR2 -TSL:5CDS 3' incomplete
ENST00000429812.5PDLIM2-210728180aaENSP00000407643.1
 
Protein coding
C9K0F0 -TSL:2CDS 3' incomplete
ENST00000443561.3PDLIM2-21270172aaENSP00000478826.1
 
Protein coding
A0A087WUQ1 -GENCODE basicTSL:2
ENST00000614502.4PDLIM2-218599146aaENSP00000477546.1
 
Protein coding
B3KPU0 -GENCODE basicTSL:2
ENST00000426493.5PDLIM2-209578173aaENSP00000392920.1
 
Protein coding
C9J0X3 -TSL:3CDS 3' incomplete
ENST00000436754.5PDLIM2-211507153aaENSP00000397738.1
 
Protein coding
C9J760 -TSL:5CDS 3' incomplete
ENST00000616289.1PDLIM2-21920918aaENSP00000478370.1
 
Protein coding
A0A087WU48 -TSL:5CDS 3' incomplete
ENST00000448520.5PDLIM2-213894137aaENSP00000481074.1
 
Nonsense mediated decay
A0A087WXJ0 -TSL:3CDS 5' incomplete
ENST00000416159.5PDLIM2-20888038aaENSP00000412936.1
 
Nonsense mediated decay
F8WFB8 -TSL:5
ENST00000622226.1PDLIM2-2206559No protein-
 
Retained intron
--TSL:NA
ENST00000491330.1PDLIM2-217563No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,491 bps, Translation length: 352 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96JY6

CCDS

This transcript is a member of the Human CCDS set: CCDS94264

Transcript Support Level (TSL)

TSL:5

Version

ENST00000397761.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.