Human (GRCh38.p14)
Description

lysine demethylase 3B [Source:HGNC Symbol;Acc:HGNC:1337]

Gene Synonyms

C5ORF7, JMJD1B, KIAA1082, NET22

About this transcript

This transcript has 24 exons, is annotated with 97 domains and features, is associated with 36301 variant alleles and maps to 897 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000314358.10KDM3B-20167241761aaENSP00000326563.5
 
Protein coding
CCDS34242Q7LBC6-1 NM_016604.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000510866.5KDM3B-2076324274aaENSP00000425186.1
 
Nonsense mediated decay
H0Y9V5 -TSL:1CDS 5' incomplete
ENST00000507996.5KDM3B-204303420aaENSP00000423012.1
 
Nonsense mediated decay
H0Y946 -TSL:2CDS 5' incomplete
ENST00000508386.1KDM3B-205540No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000505756.1KDM3B-203654No protein-
 
Retained intron
--TSL:2
ENST00000512928.1KDM3B-208627No protein-
 
Retained intron
--TSL:2
ENST00000509468.1KDM3B-206576No protein-
 
Retained intron
--TSL:5
ENST00000504095.1KDM3B-202555No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 24, Coding exons: 24, Transcript length: 6,724 bps, Translation length: 1,761 residues

MANE

This MANE Select transcript contains ENSP00000326563 and matches to NM_016604.4 and NP_057688.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7LBC6

CCDS

This transcript is a member of the Human CCDS set: CCDS34242

Transcript Support Level (TSL)

TSL:1

Version

ENST00000314358.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.