Human (GRCh38.p14)
Description

TNF alpha induced protein 3 [Source:HGNC Symbol;Acc:HGNC:11896]

Gene Synonyms

A20, OTUD7C

About this transcript

This transcript has 9 exons, is annotated with 89 domains and features, is associated with 8444 variant alleles and maps to 580 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000612899.5TNFAIP3-2064665790aaENSP00000481570.1
 
Protein coding
CCDS5187P21580 NM_001270508.2MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENST00000421450.2TNFAIP3-2034689790aaENSP00000393577.2
 
Protein coding
CCDS5187P21580 Q5VXR0 -GENCODE basicAPPRIS P1TSL:2
ENST00000433680.2TNFAIP3-2044533790aaENSP00000409845.2
 
Protein coding
CCDS5187P21580 Q5VXQ9 -GENCODE basicAPPRIS P1TSL:3
ENST00000237289.8TNFAIP3-2014432790aaENSP00000237289.4
 
Protein coding
CCDS5187P21580 -GENCODE basicAPPRIS P1TSL:1
ENST00000420009.6TNFAIP3-2023861790aaENSP00000401562.2
 
Protein coding
CCDS5187Q5VXQ8 -GENCODE basicAPPRIS P1TSL:3
ENST00000711061.1TNFAIP3-2094683108aaENSP00000518561.1
 
Nonsense mediated decay
---
ENST00000698330.1TNFAIP3-208336No protein-
 
Protein coding CDS not defined
---
ENST00000698329.1TNFAIP3-2075432No protein-
 
Retained intron
---
ENST00000485192.2TNFAIP3-2054966No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 9, Coding exons: 8, Transcript length: 4,665 bps, Translation length: 790 residues

MANE

This MANE Select transcript contains ENSP00000481570 and matches to NM_001270508.2 and NP_001257437.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P21580

CCDS

This transcript is a member of the Human CCDS set: CCDS5187

Transcript Support Level (TSL)

TSL:5

Version

ENST00000612899.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported only [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.