Human (GRCh38.p14)
Description

lysine demethylase 5B [Source:HGNC Symbol;Acc:HGNC:18039]

Gene Synonyms

CT31, JARID1B, PLU-1, PPP1R98, RBBP2H1A

About this transcript

This transcript has 21 exons, is associated with 19730 variant alleles and maps to 441 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000367265.9KDM5B-20392921544aaENSP00000356234.3
 
Protein coding
CCDS30974Q9UGL1-1 NM_006618.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000648338.1KDM5B-21794851517aaENSP00000497564.1
 
Protein coding
A0A3B3IT25 -GENCODE basic
ENST00000648473.1KDM5B-22067031505aaENSP00000497743.1
 
Protein coding
A0A3B3ITE7 -GENCODE basic
ENST00000367264.7KDM5B-20265201580aaENSP00000356233.2
 
Protein coding
CCDS81417Q9UGL1-2 -GENCODE basicTSL:1
ENST00000648056.1KDM5B-21563901539aaENSP00000497113.1
 
Protein coding
CCDS91144A0A3B3IS40 -GENCODE basicAPPRIS ALT2
ENST00000650569.1KDM5B-24062021499aaENSP00000497671.1
 
Protein coding
CCDS91143A0A3B3ITA8 -GENCODE basic
ENST00000649770.1KDM5B-23359191472aaENSP00000497288.1
 
Protein coding
A0A3B3ISE6 -GENCODE basic
ENST00000648469.1KDM5B-21954221503aaENSP00000497827.1
 
Protein coding
A0A3B3ITJ7 -GENCODE basic
ENST00000235790.9KDM5B-20144671275aaENSP00000235790.4
 
Protein coding
B3KV94 -TSL:2CDS 3' incomplete
ENST00000650368.1KDM5B-2353779215aaENSP00000497042.1
 
Protein coding
A0A3B3IS31 -GENCODE basic
ENST00000649200.1KDM5B-2262667229aaENSP00000497898.1
 
Protein coding
A0A3B3ITR1 -GENCODE basic
ENST00000648676.1KDM5B-221179930aaENSP00000497823.1
 
Protein coding
A0A3B3ITN3 -CDS 5' incomplete
ENST00000649929.1KDM5B-2341188297aaENSP00000497621.1
 
Protein coding
A0A3B3IT51 -CDS 5' incomplete
ENST00000648738.1KDM5B-222948316aaENSP00000497670.1
 
Protein coding
A0A3B3IT85 -CDS 5' and 3' incomplete
ENST00000648354.1KDM5B-218787145aaENSP00000497809.1
 
Protein coding
A0A3B3ITJ3 -CDS 5' incomplete
ENST00000650493.1KDM5B-238571142aaENSP00000497862.1
 
Protein coding
A0A3B3ITR3 -CDS 3' incomplete
ENST00000650417.1KDM5B-2365362189aaENSP00000497297.1
 
Nonsense mediated decay
A0A3B3ISK2 --
ENST00000649089.1KDM5B-2253550336aaENSP00000497685.1
 
Nonsense mediated decay
A0A3B3ITA9 -CDS 5' incomplete
ENST00000602511.1KDM5B-21054277aaENSP00000473481.1
 
Nonsense mediated decay
R4GN45 -TSL:5CDS 5' incomplete
ENST00000647757.1KDM5B-2146678No protein-
 
Protein coding CDS not defined
---
ENST00000649542.1KDM5B-2326149No protein-
 
Protein coding CDS not defined
---
ENST00000456180.2KDM5B-204574No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000470573.5KDM5B-206535No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000467487.3KDM5B-205529No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000650506.1KDM5B-2395725No protein-
 
Retained intron
---
ENST00000649230.1KDM5B-2275403No protein-
 
Retained intron
---
ENST00000649400.1KDM5B-2314750No protein-
 
Retained intron
---
ENST00000472822.6KDM5B-2073806No protein-
 
Retained intron
--TSL:1
ENST00000648958.1KDM5B-2243691No protein-
 
Retained intron
---
ENST00000650422.1KDM5B-2373630No protein-
 
Retained intron
---
ENST00000498276.2KDM5B-2093309No protein-
 
Retained intron
--TSL:4
ENST00000647747.1KDM5B-2123243No protein-
 
Retained intron
---
ENST00000649339.1KDM5B-2293141No protein-
 
Retained intron
---
ENST00000491153.2KDM5B-2082972No protein-
 
Retained intron
--TSL:2
ENST00000647754.1KDM5B-2132301No protein-
 
Retained intron
---
ENST00000647657.1KDM5B-2112019No protein-
 
Retained intron
---
ENST00000649321.1KDM5B-2281141No protein-
 
Retained intron
---
ENST00000648744.1KDM5B-223535No protein-
 
Retained intron
---
ENST00000649388.1KDM5B-230444No protein-
 
Retained intron
---
ENST00000648099.1KDM5B-216351No protein-
 
Retained intron
---
Statistics

Exons: 21, Coding exons: 0, Transcript length: 3,630 bps,

Version

ENST00000650422.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]