Human (GRCh38.p14)
Description

lysine demethylase 5B [Source:HGNC Symbol;Acc:HGNC:18039]

Gene Synonyms

CT31, JARID1B, PLU-1, PPP1R98, RBBP2H1A

About this transcript

This transcript has 27 exons, is annotated with 161 domains and features, is associated with 38899 variant alleles and maps to 1058 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000367265.9KDM5B-20392921544aaENSP00000356234.3
 
Protein coding
CCDS30974Q9UGL1-1 NM_006618.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000648338.1KDM5B-21794851517aaENSP00000497564.1
 
Protein coding
A0A3B3IT25 -GENCODE basic
ENST00000648473.1KDM5B-22067031505aaENSP00000497743.1
 
Protein coding
A0A3B3ITE7 -GENCODE basic
ENST00000367264.7KDM5B-20265201580aaENSP00000356233.2
 
Protein coding
CCDS81417Q9UGL1-2 -GENCODE basicTSL:1
ENST00000648056.1KDM5B-21563901539aaENSP00000497113.1
 
Protein coding
CCDS91144A0A3B3IS40 -GENCODE basicAPPRIS ALT2
ENST00000650569.1KDM5B-24062021499aaENSP00000497671.1
 
Protein coding
CCDS91143A0A3B3ITA8 -GENCODE basic
ENST00000649770.1KDM5B-23359191472aaENSP00000497288.1
 
Protein coding
A0A3B3ISE6 -GENCODE basic
ENST00000648469.1KDM5B-21954221503aaENSP00000497827.1
 
Protein coding
A0A3B3ITJ7 -GENCODE basic
ENST00000235790.9KDM5B-20144671275aaENSP00000235790.4
 
Protein coding
B3KV94 -TSL:2CDS 3' incomplete
ENST00000650368.1KDM5B-2353779215aaENSP00000497042.1
 
Protein coding
A0A3B3IS31 -GENCODE basic
ENST00000649200.1KDM5B-2262667229aaENSP00000497898.1
 
Protein coding
A0A3B3ITR1 -GENCODE basic
ENST00000648676.1KDM5B-221179930aaENSP00000497823.1
 
Protein coding
A0A3B3ITN3 -CDS 5' incomplete
ENST00000649929.1KDM5B-2341188297aaENSP00000497621.1
 
Protein coding
A0A3B3IT51 -CDS 5' incomplete
ENST00000648738.1KDM5B-222948316aaENSP00000497670.1
 
Protein coding
A0A3B3IT85 -CDS 5' and 3' incomplete
ENST00000648354.1KDM5B-218787145aaENSP00000497809.1
 
Protein coding
A0A3B3ITJ3 -CDS 5' incomplete
ENST00000650493.1KDM5B-238571142aaENSP00000497862.1
 
Protein coding
A0A3B3ITR3 -CDS 3' incomplete
ENST00000650417.1KDM5B-2365362189aaENSP00000497297.1
 
Nonsense mediated decay
A0A3B3ISK2 --
ENST00000649089.1KDM5B-2253550336aaENSP00000497685.1
 
Nonsense mediated decay
A0A3B3ITA9 -CDS 5' incomplete
ENST00000602511.1KDM5B-21054277aaENSP00000473481.1
 
Nonsense mediated decay
R4GN45 -TSL:5CDS 5' incomplete
ENST00000647757.1KDM5B-2146678No protein-
 
Protein coding CDS not defined
---
ENST00000649542.1KDM5B-2326149No protein-
 
Protein coding CDS not defined
---
ENST00000456180.2KDM5B-204574No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000470573.5KDM5B-206535No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000467487.3KDM5B-205529No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000650506.1KDM5B-2395725No protein-
 
Retained intron
---
ENST00000649230.1KDM5B-2275403No protein-
 
Retained intron
---
ENST00000649400.1KDM5B-2314750No protein-
 
Retained intron
---
ENST00000472822.6KDM5B-2073806No protein-
 
Retained intron
--TSL:1
ENST00000648958.1KDM5B-2243691No protein-
 
Retained intron
---
ENST00000650422.1KDM5B-2373630No protein-
 
Retained intron
---
ENST00000498276.2KDM5B-2093309No protein-
 
Retained intron
--TSL:4
ENST00000647747.1KDM5B-2123243No protein-
 
Retained intron
---
ENST00000649339.1KDM5B-2293141No protein-
 
Retained intron
---
ENST00000491153.2KDM5B-2082972No protein-
 
Retained intron
--TSL:2
ENST00000647754.1KDM5B-2132301No protein-
 
Retained intron
---
ENST00000647657.1KDM5B-2112019No protein-
 
Retained intron
---
ENST00000649321.1KDM5B-2281141No protein-
 
Retained intron
---
ENST00000648744.1KDM5B-223535No protein-
 
Retained intron
---
ENST00000649388.1KDM5B-230444No protein-
 
Retained intron
---
ENST00000648099.1KDM5B-216351No protein-
 
Retained intron
---
Statistics

Exons: 27, Coding exons: 27, Transcript length: 9,292 bps, Translation length: 1,544 residues

MANE

This MANE Select transcript contains ENSP00000356234 and matches to NM_006618.5 and NP_006609.3

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UGL1

CCDS

This transcript is a member of the Human CCDS set: CCDS30974

Transcript Support Level (TSL)

TSL:1

Version

ENST00000367265.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

upstream ATG [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.