Human (GRCh38.p14)
Description

paired related homeobox 1 [Source:HGNC Symbol;Acc:HGNC:9142]

Gene Synonyms

PHOX1, PMX1

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features, is associated with 33796 variant alleles and maps to 371 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000239461.11PRRX1-2014061245aaENSP00000239461.6
 
Protein coding
CCDS1290P54821-1 NM_022716.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000497230.2PRRX1-2073501200aaENSP00000450762.1
 
Protein coding
G3V2N3 -GENCODE basicTSL:2
ENST00000367760.7PRRX1-2022217217aaENSP00000356734.3
 
Protein coding
CCDS1291P54821-2 -GENCODE basicTSL:1
ENST00000476867.6PRRX1-203586No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000553786.1PRRX1-208529No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000495280.5PRRX1-205464No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000496573.1PRRX1-206362No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000485529.5PRRX1-204329No protein-
 
Protein coding CDS not defined
--TSL:2
Statistics

Exons: 4, Coding exons: 4, Transcript length: 4,061 bps, Translation length: 245 residues

MANE

This MANE Select transcript contains ENSP00000239461 and matches to NM_022716.4 and NP_073207.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P54821

CCDS

This transcript is a member of the Human CCDS set: CCDS1290

Transcript Support Level (TSL)

TSL:1

Version

ENST00000239461.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.