Human (GRCh38.p14)
Description

structural maintenance of chromosomes 4 [Source:HGNC Symbol;Acc:HGNC:14013]

Gene Synonyms

CAP-C, HCAP-C, SMC4L1

About this transcript

This transcript has 9 exons, is annotated with 13 domains and features, is associated with 7385 variant alleles and maps to 365 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000357388.8SMC4-20251161288aaENSP00000349961.3
 
Protein coding
CCDS3189Q9NTJ3-1 NM_001002800.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000344722.5SMC4-20153561288aaENSP00000341382.5
 
Protein coding
CCDS3189Q9NTJ3-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000462787.5SMC4-20450331230aaENSP00000420734.1
 
Protein coding
Q9NTJ3-2 -GENCODE basicTSL:2
ENST00000469762.5SMC4-21039981263aaENSP00000417964.1
 
Protein coding
CCDS75046E9PD53 -GENCODE basicTSL:2
ENST00000489573.5SMC4-2211553423aaENSP00000420121.1
 
Protein coding
C9JR83 -TSL:1CDS 3' incomplete
ENST00000465903.5SMC4-206849170aaENSP00000419247.1
 
Protein coding
C9JWF0 -TSL:3CDS 3' incomplete
ENST00000490207.5SMC4-222821180aaENSP00000420817.1
 
Protein coding
C9JJ64 -TSL:5CDS 3' incomplete
ENST00000497311.5SMC4-226708173aaENSP00000418820.1
 
Protein coding
C9IYK2 -TSL:5CDS 3' incomplete
ENST00000485867.5SMC4-217629157aaENSP00000417612.1
 
Protein coding
C9J9E4 -TSL:3CDS 3' incomplete
ENST00000485645.5SMC4-216583173aaENSP00000420644.1
 
Protein coding
C9IYK2 -TSL:5CDS 3' incomplete
ENST00000472991.5SMC4-214582139aaENSP00000417999.1
 
Protein coding
C9J578 -TSL:5CDS 3' incomplete
ENST00000467468.5SMC4-208566119aaENSP00000419360.1
 
Protein coding
C9JVD8 -TSL:4CDS 3' incomplete
ENST00000469858.5SMC4-211197150aaENSP00000418434.1
 
Nonsense mediated decay
F8WCB7 -TSL:2
ENST00000470240.5SMC4-212724No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000472282.5SMC4-213667No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000487747.5SMC4-219637No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000494612.1SMC4-224622No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000497984.5SMC4-227563No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000462668.5SMC4-2034235No protein-
 
Retained intron
--TSL:2
ENST00000468653.5SMC4-2091756No protein-
 
Retained intron
--TSL:2
ENST00000465563.5SMC4-205747No protein-
 
Retained intron
--TSL:2
ENST00000486711.1SMC4-218621No protein-
 
Retained intron
--TSL:2
ENST00000488017.1SMC4-220592No protein-
 
Retained intron
--TSL:4
ENST00000497203.1SMC4-225490No protein-
 
Retained intron
--TSL:3
ENST00000484799.1SMC4-215478No protein-
 
Retained intron
--TSL:2
ENST00000493695.1SMC4-223457No protein-
 
Retained intron
--TSL:2
ENST00000467263.1SMC4-207401No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,553 bps, Translation length: 423 residues

Transcript Support Level (TSL)

TSL:1

Incomplete CDS

CDS 3' incomplete

Version

ENST00000489573.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.