Human (GRCh38.p14)
Description

solute carrier family 6 member 4 [Source:HGNC Symbol;Acc:HGNC:11050]

Gene Synonyms

5-HTT, HTT, OCD1, SERT1

Location
About this transcript

This transcript has 2 exons, is associated with 2016 variant alleles and maps to 299 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000650711.1SLC6A4-2066335630aaENSP00000498537.1
 
Protein coding
CCDS11256P31645-1 NM_001045.6MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1
ENST00000261707.7SLC6A4-2016604630aaENSP00000261707.3
 
Protein coding
CCDS11256P31645-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000401766.6SLC6A4-2036543630aaENSP00000385822.2
 
Protein coding
CCDS11256P31645-1 -GENCODE basicAPPRIS P1TSL:5
ENST00000394821.2SLC6A4-2022160618aaENSP00000378298.2
 
Protein coding
J3KPR9 -TSL:1CDS 3' incomplete
ENST00000579221.5SLC6A4-205106972aaENSP00000463172.1
 
Nonsense mediated decay
J3QKP3 -TSL:1CDS 5' incomplete
ENST00000578609.1SLC6A4-204566No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 2, Coding exons: 0, Transcript length: 566 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000578609.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.