Human (GRCh38.p14)
Description

pyridoxamine 5'-phosphate oxidase [Source:HGNC Symbol;Acc:HGNC:30260]

Gene Synonyms

PDXPO

Location
About this transcript

This transcript has 7 exons, is annotated with 13 domains and features, is associated with 3324 variant alleles and maps to 466 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000642017.2PNPO-2173417261aaENSP00000493302.2
 
Protein coding
CCDS11522Q9NVS9-1 NM_018129.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1
ENST00000225573.5PNPO-2012256218aaENSP00000225573.5
 
Protein coding
Q9NVS9-4 -GENCODE basicTSL:1
ENST00000434554.7PNPO-2021196243aaENSP00000399960.3
 
Protein coding
Q9NVS9-3 -GENCODE basicTSL:2
ENST00000584061.6PNPO-206723238aaENSP00000463972.2
 
Protein coding
J3QQZ9 -TSL:4CDS 5' incomplete
ENST00000583599.6PNPO-205696165aaENSP00000463919.2
 
Protein coding
J3QQV6 -TSL:4CDS 3' incomplete
ENST00000641511.1PNPO-213453151aaENSP00000493348.1
 
Protein coding
A0A286YFL3 -CDS 5' and 3' incomplete
ENST00000641323.1PNPO-211365772aaENSP00000492965.1
 
Nonsense mediated decay
A0A286YF38 --
ENST00000641709.1PNPO-215323246aaENSP00000493349.1
 
Nonsense mediated decay
A0A286YFA1 --
ENST00000641856.1PNPO-216261969aaENSP00000493224.1
 
Nonsense mediated decay
Q9NVS9-2 --
ENST00000582171.6PNPO-203137269aaENSP00000463994.1
 
Nonsense mediated decay
Q9NVS9-2 -TSL:2
ENST00000641703.1PNPO-214113134aaENSP00000493219.1
 
Nonsense mediated decay
A0A286YF16 -CDS 5' incomplete
ENST00000585320.5PNPO-20850369aaENSP00000462345.1
 
Nonsense mediated decay
Q9NVS9-2 -TSL:3
ENST00000641427.1PNPO-2121411No protein-
 
Protein coding CDS not defined
---
ENST00000583245.6PNPO-204518No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000641285.1PNPO-209488No protein-
 
Protein coding CDS not defined
---
ENST00000641305.1PNPO-2103315No protein-
 
Retained intron
---
ENST00000584806.2PNPO-2072940No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 7, Coding exons: 7, Transcript length: 3,417 bps, Translation length: 261 residues

MANE

This MANE Select transcript contains ENSP00000493302 and matches to NM_018129.4 and NP_060599.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NVS9

CCDS

This transcript is a member of the Human CCDS set: CCDS11522

Version

ENST00000642017.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.