Human (GRCh38.p14)
Description

upstream binding transcription factor [Source:HGNC Symbol;Acc:HGNC:12511]

Gene Synonyms

NOR-90, UBF, UBF1, UBF2

Location
About this transcript

This transcript has 20 exons, is annotated with 46 domains and features, is associated with 9387 variant alleles and maps to 1144 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000436088.6UBTF-2044795764aaENSP00000390669.1
 
Protein coding
CCDS11480P17480-1 NM_014233.4MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:2
ENST00000302904.8UBTF-2014997764aaENSP00000302640.4
 
Protein coding
CCDS11480P17480-1 -GENCODE basicAPPRIS P1TSL:2
ENST00000343638.9UBTF-2024684727aaENSP00000345297.5
 
Protein coding
CCDS42346P17480-2 -GENCODE basicTSL:1
ENST00000533177.5UBTF-2133011727aaENSP00000437180.1
 
Protein coding
CCDS42346P17480-2 -GENCODE basicTSL:5
ENST00000527034.5UBTF-2063010745aaENSP00000431539.1
 
Protein coding
E9PKP7 -GENCODE basicTSL:5
ENST00000393606.7UBTF-2032683727aaENSP00000377231.3
 
Protein coding
CCDS42346P17480-2 -GENCODE basicTSL:1
ENST00000529383.5UBTF-2092570764aaENSP00000435708.1
 
Protein coding
CCDS11480P17480-1 -GENCODE basicAPPRIS P1TSL:1
ENST00000704741.1UBTF-2162569764aaENSP00000516019.1
 
Protein coding
CCDS11480P17480-1 -GENCODE basicAPPRIS P1
ENST00000704746.1UBTF-2182518764aaENSP00000516023.1
 
Protein coding
CCDS11480P17480-1 -GENCODE basicAPPRIS P1
ENST00000526094.5UBTF-2052459727aaENSP00000432925.1
 
Protein coding
CCDS42346P17480-2 -GENCODE basicTSL:5
ENST00000704742.1UBTF-2172338727aaENSP00000516020.1
 
Protein coding
CCDS42346P17480-2 -GENCODE basic
ENST00000530828.1UBTF-211721149aaENSP00000433046.1
 
Protein coding
E9PMM2 -TSL:5CDS 3' incomplete
ENST00000529373.1UBTF-208674194aaENSP00000431295.1
 
Protein coding
E9PLT2 -TSL:2CDS 3' incomplete
ENST00000704740.1UBTF-2152747610aaENSP00000516018.1
 
Nonsense mediated decay
A0A994J4N4 --
ENST00000537550.1UBTF-2141085No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000529947.1UBTF-210685No protein-
 
Retained intron
--TSL:3
ENST00000529042.1UBTF-207535No protein-
 
Retained intron
--TSL:3
ENST00000531368.1UBTF-212431No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 20, Coding exons: 19, Transcript length: 4,684 bps, Translation length: 727 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P17480

CCDS

This transcript is a member of the Human CCDS set: CCDS42346

Transcript Support Level (TSL)

TSL:1

Version

ENST00000343638.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.