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Description

polynucleotide kinase 3'- phosphatase [Source:MGI Symbol;Acc:MGI:1891698]

Gene Synonyms

1810009G08Rik, PNK

Location
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchFlags
Pnkp-201ENSMUST00000003044.142184522aaENSMUSP00000003044.8
 
Protein coding
CCDS39945G5E8N7 GENCODE basicAPPRIS P1TSL:1
Pnkp-203ENSMUST00000107876.81770522aaENSMUSP00000103508.2
 
Protein coding
CCDS39945G5E8N7 GENCODE basicAPPRIS P1TSL:1
Pnkp-202ENSMUST00000098478.71550486aaENSMUSP00000096078.4
 
Protein coding
CCDS71955E9Q9A5 GENCODE basicTSL:1
Pnkp-217ENSMUST00000208666.2765255aaENSMUSP00000147012.2
 
Protein coding
-A0A140LIZ1 TSL:5CDS 5' and 3' incomplete
Pnkp-213ENSMUST00000200892.2454151aaENSMUSP00000144163.2
 
Protein coding
-A0A0J9YUF9 TSL:2CDS 5' and 3' incomplete
Pnkp-211ENSMUST00000154968.221334aaENSMUSP00000115504.4
 
Protein coding
-D3YZV7 TSL:5CDS 3' incomplete
Pnkp-215ENSMUST00000202646.4444148aaENSMUSP00000144484.2
 
Non stop decay
-A0A0J9YV48 TSL:3CDS 5' incomplete
Pnkp-212ENSMUST00000155050.5167459aaENSMUSP00000144663.2
 
Nonsense mediated decay
-A0A0J9YVH5 TSL:5
Pnkp-204ENSMUST00000123015.81573180aaENSMUSP00000143862.2
 
Nonsense mediated decay
-A0A0J9YTV1 TSL:1
Pnkp-214ENSMUST00000201882.41497426aaENSMUSP00000144690.2
 
Nonsense mediated decay
-A0A0J9YVJ6 TSL:5
Pnkp-207ENSMUST00000139003.899053aaENSMUSP00000143904.2
 
Nonsense mediated decay
-A0A0J9YUT2 TSL:5
Pnkp-205ENSMUST00000124168.893353aaENSMUSP00000144330.2
 
Nonsense mediated decay
-A0A0J9YUT2 TSL:5
Pnkp-216ENSMUST00000208385.262480aaENSMUSP00000147079.2
 
Nonsense mediated decay
-A0A140LJ53 TSL:5CDS 5' incomplete
Pnkp-209ENSMUST00000145850.81975No protein-
 
Retained intron
--TSL:1
Pnkp-210ENSMUST00000152747.3860No protein-
 
Retained intron
--TSL:5
Pnkp-206ENSMUST00000126860.6672No protein-
 
Retained intron
--TSL:5
Pnkp-208ENSMUST00000144669.3455No protein-
 
Retained intron
--TSL:3
Description

golgi brefeldin A resistant guanine nucleotide exchange factor 1 [Source:HGNC Symbol;Acc:HGNC:4181]

Gene Synonyms

ARF1GEF, KIAA0248

Gene
NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
GBF1-201ENST00000369983.464001860aaENSP00000359000.4
 
Protein coding
-Q92538-1 -Ensembl CanonicalGENCODE basicAPPRIS P3TSL:1
GBF1-207ENST00000676513.166461859aaENSP00000503207.1
 
Protein coding
CCDS7533--GENCODE basicAPPRIS ALT1
GBF1-223ENST00000676939.164371859aaENSP00000503981.1
 
Protein coding
CCDS7533--GENCODE basicAPPRIS ALT1
GBF1-203ENST00000673650.165021892aaENSP00000501233.1
 
Protein coding
-A0A669KBG8 -GENCODE basic
GBF1-204ENST00000674034.164781884aaENSP00000501064.1
 
Protein coding
-A0A669KB10 -GENCODE basic
GBF1-230ENST00000677240.163911856aaENSP00000503428.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
GBF1-234ENST00000677439.163521843aaENSP00000503565.1
 
Protein coding
---GENCODE basic
GBF1-231ENST00000677247.163011827aaENSP00000504013.1
 
Protein coding
---GENCODE basic
GBF1-274ENST00000678351.161031761aaENSP00000502966.1
 
Protein coding
---GENCODE basic
GBF1-312ENST00000679238.161031761aaENSP00000504214.1
 
Protein coding
---GENCODE basic
GBF1-242ENST00000677618.160941757aaENSP00000502877.1
 
Protein coding
---GENCODE basic
GBF1-225ENST00000676993.157361855aaENSP00000503918.1
 
Protein coding
---GENCODE basicAPPRIS ALT2
GBF1-249ENST00000677719.11025153aaENSP00000503380.1
 
Protein coding
---CDS 5' incomplete
GBF1-304ENST00000679080.1747136aaENSP00000503258.1
 
Protein coding
---CDS 5' incomplete
GBF1-258ENST00000677947.148232aaENSP00000504014.1
 
Protein coding
---CDS 3' incomplete
GBF1-245ENST00000677642.1435145aaENSP00000504116.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-250ENST00000677776.1419140aaENSP00000504549.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-308ENST00000679139.1415138aaENSP00000503451.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-238ENST00000677504.1407136aaENSP00000503784.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-277ENST00000678426.1398132aaENSP00000504485.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-272ENST00000678319.1395132aaENSP00000503165.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-284ENST00000678530.1372124aaENSP00000504832.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-270ENST00000678292.1331110aaENSP00000504021.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-299ENST00000678924.1323108aaENSP00000503272.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-293ENST00000678742.1308103aaENSP00000504556.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-290ENST00000678665.1305102aaENSP00000503928.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-222ENST00000676934.128394aaENSP00000503225.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-224ENST00000676985.128294aaENSP00000504793.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-295ENST00000678806.127993aaENSP00000503984.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-265ENST00000678127.126889aaENSP00000504207.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-267ENST00000678215.124381aaENSP00000503048.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-210ENST00000676561.120970aaENSP00000504119.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-211ENST00000676606.120468aaENSP00000504111.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-289ENST00000678604.119765aaENSP00000502953.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-287ENST00000678575.118662aaENSP00000503764.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-205ENST00000676474.117960aaENSP00000503988.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-283ENST00000678527.117859aaENSP00000504189.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-257ENST00000677917.117759aaENSP00000503597.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-214ENST00000676735.115953aaENSP00000504811.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-303ENST00000679040.111338aaENSP00000504631.1
 
Protein coding
---CDS 5' and 3' incomplete
GBF1-281ENST00000678504.164631600aaENSP00000503983.1
 
Nonsense mediated decay
----
GBF1-279ENST00000678476.163811493aaENSP00000503655.1
 
Nonsense mediated decay
----
GBF1-263ENST00000678036.163691489aaENSP00000502947.1
 
Nonsense mediated decay
----
GBF1-246ENST00000677655.163291682aaENSP00000504432.1
 
Nonsense mediated decay
----
GBF1-213ENST00000676682.16310190aaENSP00000503097.1
 
Nonsense mediated decay
----
GBF1-309ENST00000679155.16156413aaENSP00000503529.1
 
Nonsense mediated decay
----
GBF1-317ENST00000679305.1716117aaENSP00000503919.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-228ENST00000677100.167379aaENSP00000502850.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-313ENST00000679253.1643118aaENSP00000503103.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-286ENST00000678571.1642122aaENSP00000504437.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-254ENST00000677842.163291aaENSP00000502897.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-208ENST00000676558.162881aaENSP00000502942.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-227ENST00000677098.1603136aaENSP00000503557.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-310ENST00000679186.160295aaENSP00000503220.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-219ENST00000676877.160172aaENSP00000503391.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-232ENST00000677269.159754aaENSP00000504136.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-212ENST00000676673.1594102aaENSP00000504200.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-285ENST00000678558.159076aaENSP00000504700.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-264ENST00000678126.156780aaENSP00000503288.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-273ENST00000678344.155667aaENSP00000503346.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-247ENST00000677662.155174aaENSP00000503788.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-253ENST00000677838.1546120aaENSP00000503137.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-261ENST00000678007.154157aaENSP00000503172.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-307ENST00000679093.1535108aaENSP00000503189.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-226ENST00000677017.151554aaENSP00000504632.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-292ENST00000678722.149383aaENSP00000503508.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-298ENST00000678923.149376aaENSP00000503266.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-305ENST00000679084.149296aaENSP00000502906.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-302ENST00000679013.146966aaENSP00000503054.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-262ENST00000678014.145965aaENSP00000504256.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-251ENST00000677797.144983aaENSP00000502896.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-278ENST00000678453.144984aaENSP00000504117.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-243ENST00000677627.144343aaENSP00000504307.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-206ENST00000676482.143485aaENSP00000503160.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-217ENST00000676854.143036aaENSP00000503195.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-315ENST00000679288.142947aaENSP00000503966.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-318ENST00000679317.142044aaENSP00000503609.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-248ENST00000677683.141234aaENSP00000503042.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-311ENST00000679203.139772aaENSP00000504092.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-221ENST00000676927.138628aaENSP00000504243.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-235ENST00000677461.138024aaENSP00000503357.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-240ENST00000677522.137942aaENSP00000504669.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-271ENST00000678293.137128aaENSP00000504689.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-220ENST00000676900.137032aaENSP00000504175.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-306ENST00000679087.136827aaENSP00000503230.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-256ENST00000677871.134128aaENSP00000504372.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-237ENST00000677491.131835aaENSP00000504695.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-218ENST00000676861.131730aaENSP00000503311.1
 
Nonsense mediated decay
---CDS 5' incomplete
GBF1-294ENST00000678767.1328No protein-
 
Processed transcript
----
GBF1-297ENST00000678840.1325No protein-
 
Processed transcript
----
GBF1-266ENST00000678157.1182No protein-
 
Processed transcript
----
GBF1-255ENST00000677852.1162No protein-
 
Processed transcript
----
GBF1-275ENST00000678401.1162No protein-
 
Processed transcript
----
GBF1-269ENST00000678268.1159No protein-
 
Processed transcript
----
GBF1-215ENST00000676802.1159No protein-
 
Processed transcript
----
GBF1-259ENST00000677956.1158No protein-
 
Processed transcript
----
GBF1-260ENST00000677975.1156No protein-
 
Processed transcript
----
GBF1-244ENST00000677629.1156No protein-
 
Processed transcript
----
GBF1-229ENST00000677235.1132No protein-
 
Processed transcript
----
GBF1-300ENST00000678941.1116No protein-
 
Processed transcript
----
GBF1-316ENST00000679298.1113No protein-
 
Processed transcript
----
GBF1-296ENST00000678826.197No protein-
 
Processed transcript
----
GBF1-268ENST00000678222.197No protein-
 
Processed transcript
----
GBF1-233ENST00000677431.197No protein-
 
Processed transcript
----
GBF1-276ENST00000678417.146No protein-
 
Processed transcript
----
GBF1-282ENST00000678514.141No protein-
 
Processed transcript
----
GBF1-314ENST00000679280.17436No protein-
 
Retained intron
----
GBF1-236ENST00000677487.17109No protein-
 
Retained intron
----
GBF1-241ENST00000677607.17109No protein-
 
Retained intron
----
GBF1-209ENST00000676560.16813No protein-
 
Retained intron
----
GBF1-291ENST00000678666.16679No protein-
 
Retained intron
----
GBF1-239ENST00000677506.16598No protein-
 
Retained intron
----
GBF1-301ENST00000679003.14581No protein-
 
Retained intron
----
GBF1-280ENST00000678486.14547No protein-
 
Retained intron
----
GBF1-288ENST00000678585.14367No protein-
 
Retained intron
----
GBF1-216ENST00000676807.13713No protein-
 
Retained intron
----
GBF1-252ENST00000677811.12695No protein-
 
Retained intron
----
GBF1-202ENST00000476019.1503No protein-
 
Retained intron
---TSL:3
Statistics

Exons: 3, Coding exons: 2, Transcript length: 556 bps, Translation length: 67 residues

Incomplete CDS

CDS 5' incomplete

Version

ENST00000678344.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

inferred exon combination [Definitions]

RNA-Seq supported only

Transcript-based displays

    HASH(0x24e4f340)