Human (GRCh38.p14)
Description

sialic acid binding Ig like lectin 6 [Source:HGNC Symbol;Acc:HGNC:10875]

Gene Synonyms

CD327, CD33L, CD33L1, OB-BP1, SIGLEC-6

Location
About this transcript

This transcript has 7 exons, is annotated with 21 domains and features, is associated with 5818 variant alleles and maps to 481 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000425629.8SIGLEC6-2053647453aaENSP00000401502.2
 
Protein coding
CCDS12834O43699-1 NM_001245.7MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P2TSL:2
ENST00000346477.7SIGLEC6-2021940437aaENSP00000344064.4
 
Protein coding
CCDS12835O43699-3 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000359982.8SIGLEC6-2031811389aaENSP00000353071.4
 
Protein coding
CCDS54308O43699-5 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000343300.8SIGLEC6-2011746353aaENSP00000345907.4
 
Protein coding
CCDS12836O43699-2 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000436458.5SIGLEC6-2061713401aaENSP00000410679.1
 
Protein coding
CCDS54307O43699-6 -GENCODE basicTSL:2
ENST00000391797.3SIGLEC6-2041391342aaENSP00000375674.3
 
Protein coding
CCDS59417O43699-4 -GENCODE basicTSL:1
ENST00000474054.1SIGLEC6-207545No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000496422.5SIGLEC6-2091393No protein-
 
Retained intron
--TSL:1
ENST00000489837.1SIGLEC6-2081372No protein-
 
Retained intron
--TSL:1
Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,940 bps, Translation length: 437 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43699

CCDS

This transcript is a member of the Human CCDS set: CCDS12835

Transcript Support Level (TSL)

TSL:2

Version

ENST00000346477.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.