Human (GRCh38.p14)
Description

DNA ligase 1 [Source:HGNC Symbol;Acc:HGNC:6598]

Gene Synonyms

HLIG1, LIGI

Location
About this transcript

This transcript has 4 exons, is associated with 2992 variant alleles and maps to 91 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000263274.12LIG1-2013125919aaENSP00000263274.6
 
Protein coding
CCDS12711P18858-1 NM_000234.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4TSL:1
ENST00000596549.6LIG1-2113180851aaENSP00000471861.2
 
Protein coding
CCDS74410F5GZ28 -GENCODE basicTSL:4
ENST00000699868.1LIG1-2233172919aaENSP00000514664.1
 
Protein coding
CCDS12711P18858-1 -GENCODE basicAPPRIS P4
ENST00000699875.1LIG1-2303126918aaENSP00000514671.1
 
Protein coding
A0A8V8TQQ7 -GENCODE basicAPPRIS ALT1
ENST00000699866.1LIG1-2213124918aaENSP00000514663.1
 
Protein coding
CCDS92658A0A8V8TQC4 -GENCODE basicAPPRIS ALT1
ENST00000699874.1LIG1-2293036889aaENSP00000514670.1
 
Protein coding
CCDS92657A0A8V8TPH8 -GENCODE basic
ENST00000427526.6LIG1-2023027888aaENSP00000442841.1
 
Protein coding
CCDS74409P18858-3 -GENCODE basicTSL:2
ENST00000699871.1LIG1-2263010886aaENSP00000514667.1
 
Protein coding
A0A8V8TNZ9 -GENCODE basic
ENST00000699877.1LIG1-2322922867aaENSP00000514672.1
 
Protein coding
A0A8V8TP03 -GENCODE basic
ENST00000699872.1LIG1-2274302135aaENSP00000514668.1
 
Nonsense mediated decay
A0A8V8TPA5 --
ENST00000699878.1LIG1-2334205544aaENSP00000514673.1
 
Nonsense mediated decay
A0A8V8TPB0 --
ENST00000594759.5LIG1-2064102800aaENSP00000471380.1
 
Nonsense mediated decay
M0R0Q7 -TSL:1
ENST00000699873.1LIG1-2284039771aaENSP00000514669.1
 
Nonsense mediated decay
A0A8V8TQC8 --
ENST00000601091.5LIG1-2193957801aaENSP00000471836.1
 
Nonsense mediated decay
P18858-2 -TSL:5
ENST00000596672.6LIG1-2123926256aaENSP00000472331.2
 
Nonsense mediated decay
M0R254 -TSL:3
ENST00000699870.1LIG1-2252914493aaENSP00000514666.1
 
Nonsense mediated decay
A0A8V8TQQ3 --
ENST00000699869.1LIG1-2242889498aaENSP00000514665.1
 
Nonsense mediated decay
A0A8V8TPH4 --
ENST00000542460.5LIG1-2031527415aaENSP00000445928.1
 
Nonsense mediated decay
B4E135 -TSL:2
ENST00000593425.5LIG1-204575No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000599165.5LIG1-216570No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000596104.5LIG1-208531No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000598938.1LIG1-215377No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000597901.2LIG1-2143591No protein-
 
Retained intron
--TSL:4
ENST00000699876.1LIG1-2313320No protein-
 
Retained intron
---
ENST00000699867.1LIG1-2222966No protein-
 
Retained intron
---
ENST00000594067.5LIG1-2052697No protein-
 
Retained intron
--TSL:2
ENST00000699879.1LIG1-2342667No protein-
 
Retained intron
---
ENST00000699881.1LIG1-2361672No protein-
 
Retained intron
---
ENST00000699880.1LIG1-2351659No protein-
 
Retained intron
---
ENST00000699865.1LIG1-220900No protein-
 
Retained intron
---
ENST00000596457.1LIG1-210792No protein-
 
Retained intron
--TSL:5
ENST00000599322.5LIG1-217620No protein-
 
Retained intron
--TSL:2
ENST00000595758.5LIG1-207606No protein-
 
Retained intron
--TSL:4
ENST00000600055.1LIG1-218602No protein-
 
Retained intron
--TSL:2
ENST00000597146.1LIG1-213589No protein-
 
Retained intron
--TSL:2
ENST00000596332.1LIG1-209584No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 4, Coding exons: 0, Transcript length: 792 bps,

Transcript Support Level (TSL)

TSL:5

Version

ENST00000596457.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.