Human (GRCh38.p14)
Description

syntaxin 4 [Source:HGNC Symbol;Acc:HGNC:11439]

Gene Synonyms

P35-2, STX4A

Location
About this transcript

This transcript has 12 exons, is annotated with 16 domains and features, is associated with 3446 variant alleles and maps to 436 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000313843.8STX4-2011410297aaENSP00000317714.3
 
Protein coding
CCDS10700Q12846-1 NM_004604.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000394998.5STX4-2021498295aaENSP00000378447.1
 
Protein coding
CCDS61916Q12846-2 -GENCODE basicTSL:2
ENST00000613541.1STX4-217649115aaENSP00000480544.1
 
Protein coding
A0A087WWW0 -TSL:2CDS 5' incomplete
ENST00000457779.6STX4-203571175aaENSP00000390788.2
 
Protein coding
C9JFM5 -TSL:3CDS 3' incomplete
ENST00000496977.5STX4-21298364aaENSP00000454841.1
 
Nonsense mediated decay
H3BMK2 -TSL:5
ENST00000460668.5STX4-20484264aaENSP00000454419.1
 
Nonsense mediated decay
H3BMK2 -TSL:3
ENST00000493902.5STX4-2111588No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000503629.6STX4-2131377No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000564368.1STX4-214561No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000487411.5STX4-2101290No protein-
 
Retained intron
--TSL:1
ENST00000566353.6STX4-2161245No protein-
 
Retained intron
--TSL:2
ENST00000461455.5STX4-2051002No protein-
 
Retained intron
--TSL:2
ENST00000565483.1STX4-215846No protein-
 
Retained intron
--TSL:5
ENST00000486660.1STX4-209610No protein-
 
Retained intron
--TSL:2
ENST00000475862.5STX4-207604No protein-
 
Retained intron
--TSL:5
ENST00000468583.1STX4-206564No protein-
 
Retained intron
--TSL:5
ENST00000478150.1STX4-208545No protein-
 
Retained intron
--TSL:4
Statistics

Exons: 12, Coding exons: 10, Transcript length: 1,498 bps, Translation length: 295 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q12846

CCDS

This transcript is a member of the Human CCDS set: CCDS61916

Transcript Support Level (TSL)

TSL:2

Version

ENST00000394998.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.