Human (GRCh38.p14)
Description

SPT20 homolog, SAGA complex component [Source:HGNC Symbol;Acc:HGNC:20596]

Gene Synonyms

BA421P11.4, C13ORF19, FAM48A, P38IP, SPT20

Location
About this transcript

This transcript has 5 exons, is associated with 1766 variant alleles and maps to 267 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000350612.11SUPT20H-2012923779aaENSP00000218894.10
 
Protein coding
CCDS31959Q8NEM7-1 NM_001014286.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENST00000360252.8SUPT20H-2032843733aaENSP00000353388.4
 
Protein coding
CCDS9362Q8NEM7-2 -GENCODE basicAPPRIS P4TSL:1
ENST00000475892.5SUPT20H-2122836811aaENSP00000417510.1
 
Protein coding
CCDS61311Q8NEM7-3 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000356185.7SUPT20H-2022681733aaENSP00000348512.3
 
Protein coding
CCDS9362Q8NEM7-2 -GENCODE basicAPPRIS P4TSL:1
ENST00000464744.5SUPT20H-2052625733aaENSP00000419754.1
 
Protein coding
CCDS9362Q8NEM7-2 -GENCODE basicAPPRIS P4TSL:2
ENST00000469488.6SUPT20H-2071313378aaENSP00000419787.2
 
Protein coding
H7C5F9 -TSL:5CDS 5' incomplete
ENST00000497318.1SUPT20H-223734190aaENSP00000420170.1
 
Protein coding
C9JQS2 -TSL:3CDS 3' incomplete
ENST00000490716.5SUPT20H-2203811522aaENSP00000473592.1
 
Nonsense mediated decay
R4GND2 -TSL:5
ENST00000495071.6SUPT20H-2223669498aaENSP00000473416.1
 
Nonsense mediated decay
B4E2D5 -TSL:5
ENST00000470359.2SUPT20H-208792No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000476109.5SUPT20H-213769No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000466563.6SUPT20H-206619No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000490602.5SUPT20H-219609No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000488590.1SUPT20H-218572No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000476539.5SUPT20H-214528No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000483241.5SUPT20H-216439No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000464572.5SUPT20H-2042948No protein-
 
Retained intron
--TSL:1
ENST00000493537.5SUPT20H-2212149No protein-
 
Retained intron
--TSL:5
ENST00000473871.1SUPT20H-2112028No protein-
 
Retained intron
--TSL:2
ENST00000484078.5SUPT20H-2171876No protein-
 
Retained intron
--TSL:1
ENST00000471868.1SUPT20H-209798No protein-
 
Retained intron
--TSL:3
ENST00000472948.1SUPT20H-210617No protein-
 
Retained intron
--TSL:2
ENST00000478911.1SUPT20H-215591No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 5, Coding exons: 0, Transcript length: 528 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000476539.5

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.