Human (GRCh38.p14)
Description

SPT20 homolog, SAGA complex component [Source:HGNC Symbol;Acc:HGNC:20596]

Gene Synonyms

BA421P11.4, C13ORF19, FAM48A, P38IP, SPT20

Location
About this transcript

This transcript has 25 exons, is annotated with 24 domains and features, is associated with 20783 variant alleles and maps to 801 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000350612.11SUPT20H-2012923779aaENSP00000218894.10
 
Protein coding
CCDS31959Q8NEM7-1 NM_001014286.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT1TSL:1
ENST00000360252.8SUPT20H-2032843733aaENSP00000353388.4
 
Protein coding
CCDS9362Q8NEM7-2 -GENCODE basicAPPRIS P4TSL:1
ENST00000475892.5SUPT20H-2122836811aaENSP00000417510.1
 
Protein coding
CCDS61311Q8NEM7-3 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000356185.7SUPT20H-2022681733aaENSP00000348512.3
 
Protein coding
CCDS9362Q8NEM7-2 -GENCODE basicAPPRIS P4TSL:1
ENST00000464744.5SUPT20H-2052625733aaENSP00000419754.1
 
Protein coding
CCDS9362Q8NEM7-2 -GENCODE basicAPPRIS P4TSL:2
ENST00000469488.6SUPT20H-2071313378aaENSP00000419787.2
 
Protein coding
H7C5F9 -TSL:5CDS 5' incomplete
ENST00000497318.1SUPT20H-223734190aaENSP00000420170.1
 
Protein coding
C9JQS2 -TSL:3CDS 3' incomplete
ENST00000490716.5SUPT20H-2203811522aaENSP00000473592.1
 
Nonsense mediated decay
R4GND2 -TSL:5
ENST00000495071.6SUPT20H-2223669498aaENSP00000473416.1
 
Nonsense mediated decay
B4E2D5 -TSL:5
ENST00000470359.2SUPT20H-208792No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000476109.5SUPT20H-213769No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000466563.6SUPT20H-206619No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000490602.5SUPT20H-219609No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000488590.1SUPT20H-218572No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000476539.5SUPT20H-214528No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000483241.5SUPT20H-216439No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000464572.5SUPT20H-2042948No protein-
 
Retained intron
--TSL:1
ENST00000493537.5SUPT20H-2212149No protein-
 
Retained intron
--TSL:5
ENST00000473871.1SUPT20H-2112028No protein-
 
Retained intron
--TSL:2
ENST00000484078.5SUPT20H-2171876No protein-
 
Retained intron
--TSL:1
ENST00000471868.1SUPT20H-209798No protein-
 
Retained intron
--TSL:3
ENST00000472948.1SUPT20H-210617No protein-
 
Retained intron
--TSL:2
ENST00000478911.1SUPT20H-215591No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 25, Coding exons: 24, Transcript length: 2,836 bps, Translation length: 811 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NEM7

CCDS

This transcript is a member of the Human CCDS set: CCDS61311

Transcript Support Level (TSL)

TSL:1

Version

ENST00000475892.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.