Human (GRCh38.p14)
Description

rubicon like autophagy enhancer [Source:HGNC Symbol;Acc:HGNC:20420]

Gene Synonyms

C13ORF18, FLJ21562, KIAA0226L, PACER

Location
About this transcript

This transcript has 15 exons, is annotated with 12 domains and features, is associated with 22179 variant alleles and maps to 685 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000429979.6RUBCNL-20811050662aaENSP00000396935.1
 
Protein coding
CCDS31970Q9H714-5 NM_025113.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2TSL:5
ENST00000676114.1RUBCNL-22111293662aaENSP00000502252.1
 
Protein coding
CCDS31970Q9H714-5 -GENCODE basicAPPRIS ALT2
ENST00000676307.1RUBCNL-2224068662aaENSP00000502015.1
 
Protein coding
CCDS31970Q9H714-5 -GENCODE basicAPPRIS ALT2
ENST00000389908.7RUBCNL-2053956662aaENSP00000374558.3
 
Protein coding
CCDS31970Q9H714-5 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000378781.7RUBCNL-2013322505aaENSP00000368057.4
 
Protein coding
CCDS66544B7ZBN5 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000378797.6RUBCNL-2043206447aaENSP00000368074.3
 
Protein coding
CCDS73569A0A0A0MRV7 -GENCODE basicAPPRIS P2TSL:1
ENST00000676051.1RUBCNL-2183045527aaENSP00000501843.1
 
Protein coding
CCDS66542Q9H714-6 -GENCODE basicAPPRIS ALT2
ENST00000409879.6RUBCNL-2062997505aaENSP00000386578.2
 
Protein coding
CCDS66544B7ZBN5 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000675992.1RUBCNL-2172990447aaENSP00000502396.1
 
Protein coding
CCDS73569A0A0A0MRV7 -GENCODE basicAPPRIS P2
ENST00000378787.7RUBCNL-2032731635aaENSP00000368064.3
 
Protein coding
CCDS66543Q9H714-4 -GENCODE basicTSL:2
ENST00000417405.2RUBCNL-2072613635aaENSP00000402357.2
 
Protein coding
CCDS66543Q9H714-4 -GENCODE basicTSL:3
ENST00000378784.8RUBCNL-2022361595aaENSP00000368061.4
 
Protein coding
CCDS66545Q9H714-3 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000675585.1RUBCNL-2152328571aaENSP00000502011.1
 
Protein coding
A0A6Q8PFX0 -GENCODE basic
ENST00000631139.2RUBCNL-2121948527aaENSP00000485932.1
 
Protein coding
CCDS66542Q9H714-6 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000439642.1RUBCNL-209972178aaENSP00000414579.1
 
Protein coding
A8XR14 -TSL:2CDS 3' incomplete
ENST00000676063.1RUBCNL-2194066479aaENSP00000501621.1
 
Nonsense mediated decay
A0A6Q8PF39 --
ENST00000441284.6RUBCNL-2103954207aaENSP00000412507.2
 
Nonsense mediated decay
E7EMA2 -TSL:5
ENST00000676084.1RUBCNL-2203762253aaENSP00000502430.1
 
Nonsense mediated decay
A0A6Q8PH05 --
ENST00000675291.1RUBCNL-2133061105aaENSP00000502306.1
 
Nonsense mediated decay
A0A6Q8PGJ9 --
ENST00000675678.1RUBCNL-216635No protein-
 
Protein coding CDS not defined
---
ENST00000675351.1RUBCNL-214551No protein-
 
Protein coding CDS not defined
---
ENST00000487195.5RUBCNL-2111736No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 15, Coding exons: 13, Transcript length: 11,050 bps, Translation length: 662 residues

MANE

This MANE Select transcript contains ENSP00000396935 and matches to NM_025113.5 and NP_079389.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9H714

CCDS

This transcript is a member of the Human CCDS set: CCDS31970

Transcript Support Level (TSL)

TSL:5

Version

ENST00000429979.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.