Human (GRCh38.p14)
Description

adaptor related protein complex 4 subunit sigma 1 [Source:HGNC Symbol;Acc:HGNC:575]

Gene Synonyms

AP47B, CLA20, SPG52

Location
About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 31453 variant alleles and maps to 391 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000542754.7AP4S1-2044060144aaENSP00000438170.2
 
Protein coding
CCDS45093Q9Y587-1 NM_001128126.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000673317.1AP4S1-2132562135aaENSP00000500890.1
 
Protein coding
A0A5F9ZI62 -GENCODE basic
ENST00000216366.9AP4S1-2012034132aaENSP00000216366.5
 
Protein coding
A0A8C8KBR5 -GENCODE basicTSL:1
ENST00000554345.6AP4S1-2051608159aaENSP00000450768.2
 
Protein coding
CCDS9642Q9Y587-2 -GENCODE basicTSL:3
ENST00000313566.11AP4S1-2021502173aaENSP00000322508.8
 
Protein coding
A0A8C8KCP6 -GENCODE basicTSL:3
ENST00000555417.6AP4S1-2071263144aaENSP00000451609.2
 
Protein coding
CCDS45093Q9Y587-1 -GENCODE basicAPPRIS P1TSL:3
ENST00000334725.8AP4S1-2031122149aaENSP00000334484.4
 
Protein coding
CCDS58309Q9Y587-4 -GENCODE basicTSL:1
ENST00000554609.6AP4S1-206889135aaENSP00000452383.2
 
Protein coding
CCDS58310Q9Y587-3 -GENCODE basicTSL:5
ENST00000556232.7AP4S1-20872399aaENSP00000451918.2
 
Protein coding
G3V4P7 -TSL:4CDS 3' incomplete
ENST00000557346.6AP4S1-210699144aaENSP00000451479.2
 
Protein coding
CCDS45093Q9Y587-1 -GENCODE basicAPPRIS P1TSL:3
ENST00000672143.1AP4S1-2112694141aaENSP00000500016.1
 
Nonsense mediated decay
A0A5F9ZH42 --
ENST00000673001.1AP4S1-2121938117aaENSP00000500716.1
 
Nonsense mediated decay
A0A5F9ZHV3 --
ENST00000556480.1AP4S1-209407No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 6, Coding exons: 5, Transcript length: 4,060 bps, Translation length: 144 residues

MANE

This MANE Select transcript contains ENSP00000438170 and matches to NM_001128126.3 and NP_001121598.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y587

CCDS

This transcript is a member of the Human CCDS set: CCDS45093

Transcript Support Level (TSL)

TSL:1

Version

ENST00000542754.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.